Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320
| | | | | | | | | | | | | | | | |
| SS Seq | CSSSSSSCCCCHHHHHHHHHHHHHHCCCCSSSSSCCCSSSCCCHHHHHHHHHHCCCCCCSSSSSSCCCCHHHHHHHHHHHHCCCCCCSSSCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCSCCCCCCCHHHHHHHHHHCCCCCCSSSSCCCCCCHHHHHHHHHCCCCCCCCSSSCCCCCCCCCCHHHHHHHHHHCCCCCCSSSCCCCCCCHHHHHHHHHHHCCCCCCCSSSCCCCCCCHHHHHHHHHHHHCCCCCCCSSCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCSSSSSCCCCCCCCCCCCCCCCCCCCCC VFVELWLKNRTLDEYLTCLLLWVKQRKDLLHLCCKKLKILGMPFRNIRSILKMVNLDCIQEVEVNCKWVLPILTQFTPYLGHMRNLQKLILSHMDVSRYVSPEQKKEIVTQFTTQFLKLRCLQKLYMNSVSFLEGHLDQLLSCLKTSLKFLTITNCVLLESDLKHLSQCPSISQLKTLDLSGIRLTNYSLVPLQILLEKVAATLEYLDLDDCGIIDSQVNAILPALSRCFELNTFSFCGNPICMATLENLLSHTIILKNLCVELYPAPRESYGADGTLCWSRFAQIRAELMNRVRDLRHPKRILFCTDYCPDCGNRSFYDLEADQYCC |
1 | 1dfjI | 0.19 | 0.17 | 5.51 | 1.33 | DEthreader | | LTELCLRTNELGDAGVHLVLQGLQ--SPT--CKIQKLSLQNLTEAGCGVLPSTLRLPTLRELHLSDNPGDAGLRLLCEGLLDQCHLEKLQLEYCRL--------TAASCEPLASVLRATRALKELTVSNNDIGEGRLGQGLADSACQLETLRLENCGLTPANCKDLCGIASQASLRELDLGSNGLGDAGIAELCPGLLSPASRLKTLWLWECDITASGCRDLCRVLQAKETLKELSLAGNKLGDEGARLLCESLCQLESLWVKSCSL---------------TAACCQHVSLMLTQNKHLLELQLSSNKLG-------GDCEVTNSGL |
2 | 5irlA2 | 0.17 | 0.14 | 4.52 | 1.38 | SPARKS-K | | NVEHLKLTFCGVGP--AECAALAFVLRHL-----RRPVALQLDHNSVIGVEQLLPLGACKALYLRDNNSDRGICKLIEHALHCEQLQKLALFNNKLTD--------GCAHSVAQLLACKQNFLALRLGN-NHITAVLAEGLRDN-SSLQFLGFWGNKVGDKGAQALAEASDHQSLKWLSLVGNNIGSVGAQALASMLEKN-VALEELCLAANHLQDAGVCSLAEGLKRNSSLKVLKLSNNCITFEALLQALASNDTILEVWLRGNPFSP---------------EEMEALSHRDSRLLL----------------------------- |
3 | 1k5gL | 0.15 | 0.13 | 4.31 | 0.63 | MapAlign | | KEIVLSGNTI-GTEAARWLSENIA-----SKKDLEIAEFSDIFPEALRLLLQALLCPKLHTVRLSDNAFGTAQEPLIDFLSKHTPLEHLYLHNNGLG--------PQAGAKIARALQELPPLRSIICGRNRLENGSMAKTFQSH-RLLHTVKMVQNGIRPEGIEHLLEGLYCQELKVLDLQDNTFTHLGSSALAIALKSW-PNLRELGLNDCLLSARGAAAVVDAFSKLIGLQTLRLQYNEIELDAVRTLKTVMPDLLFLELNGNRFSEED-------------DVVDEIREVFSTRGRGELDELMEE-------------------- |
4 | 1k5gL | 0.12 | 0.11 | 3.98 | 0.48 | CEthreader | | ARFSIEGKSLKLDAITEDEKSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIAKKDLEIAEFSDIFIPEALRLLLQALLKCPKLHTVRLSDNAFG--------PTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQPPLRSIICGRNRLENGSMKEWAKTQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFIGLQTLRLQYNEIE---------------LDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDDVVDEIREVFSTR |
5 | 5irlA2 | 0.17 | 0.14 | 4.52 | 1.25 | MUSTER | | EHLKLT-FCGVGPAECAALAFVLRHLRRPVALQLDH----SVGDIGVEQLLPC--LGACKALYLRDNISDRGICKLIEHALHCEQLQKLALFNNKLT--------DGCAHSVAQLLACKQNFLALRLGNNHITAEGAQVLAEGLRSSLQFLGFWGNKVGDKGAQALAEASDHQSLKWLSLVGNNIGSVGAQALASMLEKN-VALEELCLAANHLQDAGVCSLAEGLKRNSSLKVLKLSNNCITFVGAEALLQALDTILEVWLRGNPFSPEE--------MEALSHRDSRLLL------------------------------------ |
6 | 6g9lA | 0.16 | 0.13 | 4.34 | 0.71 | HHsearch | | RALHIKFTD-I-----KEIPLWIY--------SLKTLEELHLTGNLSAEVDGLRELKRLKVLRLKSN-----LSKLPQVVTDVVHLQKLSINNEGTKLIVLLELIRCDLERIPHSIFSLHNLQEIDLKD-NNLKT-IEESFQHLHTNLERLYLNRNKIE-KIPTQLF---YCRKLRYLDLSHNNLTF-LPADIGLL-----QNLQNLAVTANRIE-A----LPPELFQCRKLRALHLGNNVLQ--SLPSRVGELTNLTQIELRGNRLE-CLPVERLVVEEDLFSTLPPEVKERLWRADKE---------------------------- |
7 | 1dfjI | 0.18 | 0.16 | 5.07 | 1.55 | FFAS-3D | | -YEVVRLDDCGLEEHCKDIGSALRANPSLTELCLRKIQKLSLQCGVLPSTLR--SLPTLRELHLSDNPLGDACEPLASVLRATRALKELTVSNNDIGEAGARVLGQSGCRDLCRVLQAKETLKELSLAGNKLGDEGARLLCESLGCQLESLWVKSCSLTAACCQHVSLLTQNKHLLELQLSSNKLGDSGIQELCQALSQPGTTLRVLCLGDCEVTNSGCSSLASLLLANRSLRELDLSNNCVGDPGVLQLLGSLCALEQLVLYDTYWT---------------EEVEDRLQALEGSKPGLRVI------------------------- |
8 | 4perA | 0.16 | 0.15 | 4.88 | 0.90 | EigenThreader | | SCSTIRLDDCNLSSNCKDLSSIIHTNPSLKELKLNLQKLWLQNCSCETLRSVLSAQPSLTELHVGDNKLGTAGVKVLCQGLMNCKLQKLQLEYCELT--------ADIVEALNAALQAKPTLKELSLSNNTLGDTAVKQLCRGLSCDLELLHLENCGITSDSCRDISAVLSSKSLLDLAVGDNKIGDTGLALLCQGLLHPNCKIQKLWLWDCDLTSASCKDLSRVFSTKETLLEVSLIDNNLRDSGMEMLCQALKDAHLQELWVRECG---------LT-----AACCKAVSSVLSVNKHLQVLHIGENHPNCNIHSLW-LGNCDITA |
9 | 3tsrE | 0.16 | 0.14 | 4.64 | 2.97 | CNFpred | | TLRELHLNDNMGDAGLKLLCEGLQDPCRLEKLQLE---YCNLTATSCEPLASVLRKADFKELVLSNNLHEPGVRILCQGLKDSCQLESLKLENCGITAA--------NCKDLCDVVASKASLQELDLSSNKLGNAGIAALCPGLLCKLRTLWLWECDITAEGCKDLCRVLAKQSLKELSLASNELKDEGARLLCESLLEPGCQLESLWIKTCSLTAASCPYFCSVLTKSRSLLELQMSSNPLGDEGVQELCKALTVLRELWLGDCDVTNS---------------GCSSLANVLLANRSLRELDLSN--------------------- |
10 | 4perA | 0.15 | 0.14 | 4.60 | 1.33 | DEthreader | | LTELHVGDNKLGTAGVKVLCQGLM-NP-N--CKLQKLQLEYCLTDIVEALNAALQKPTLKELSLSNNTLGTAVKQLCRGLVEACDLELLHLENCGI--------TSDSCRDISAVLSSKPSLLDLAVGDNKIGDTALCQGLLHPNCKIQKLWLWDCDLTSASCKDLSRVSTKETLLEVSLIDNNLRDSGMEMLCQALKDPKAHLQELWVRECGLTAACCKAVSSVLSVNKHLQVLHIGENKLGNAGVEILCEGLHCNIHSLWLGNCDI--------------TAACCATLANVMVTKQNLTELDLSYNTLE-------YDIFWGPEVL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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