Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Download alignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440
| | | | | | | | | | | | | | | | | | | | | | |
| SS Seq | CHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHCSSSSSCCCCSSSSCCCCCCSSSSSSSCSSSSSSCCCSSSSSCCCCSSCCHHHCCCCCCCCSSSSSSCSSSSSSSHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DEENILNELNDPLREEIVNFNCRKLVATMPLFANADPNFVTAMLSKLRFEVFQPGDYIIREGAVGKKMYFIQHGVAGVITKSSKEMKLTDGSYFGEICLLTKGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVAIDRLDRIGKKNSILLQKFQKDLNTGVFNNQENEILKQIVKHDREMVQAIAPINYPQMTTLNSTSSTTTPTSRMRTQSPPVYTATSLSHSNLHSPSPSTQTPQPSAILSPCSYTTAVCSPPVQSPLAARTFHYASPTASQLSLMQQQPQQQVQQSQPPQTQPQQPSPQPQTPGSSTPKNEVHKSTQALHNTNLTREVRPLSASQPSLPHEVSTLISRPHPTVGESLASIPQPVTAVPGTGLQAGGRSTVPQRVTLFRQMSSGAIPPNRGVPPAPPPPAAALPRESSSVLNTDPDAEKPRFASNL |
1 | 5u6oA | 1.00 | 0.32 | 8.91 | 1.28 | SPARKS-K | | DEENILNELNDPLREEIVNFNCRKLVATMPLFANADPNFVTAMLSKLRFEVFQPGDYIIREGAVGKKMYFIQHGVAGVITKSSKEMKLTDGSYFGEICLLTKGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETV---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
2 | 2ynpA | 0.05 | 0.05 | 2.44 | 1.29 | MapAlign | | -----AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSTPNFTLTTGQERGVNYMITASDDLTIKIWDYQTKSCVATLSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSLAHSPNGRFVTVVGDGEYVIYTALAWRNKAFGKCQDFVWGPDSNSYALIDETGQIKYYKNFKEVMHSAIDRLFSGALLGVKSDGFVYFFDWDNGTLVRRIDVNAKDVIWSDNGELVMIVNTNSNGDEASGYTLKDAYLEAANNGNIDDSEGVDEAFDVLYELSESITSGKWVGDVFIFTTATNRLNYFVGGKT |
3 | 5u6oA | 1.00 | 0.32 | 8.91 | 3.04 | CNFpred | | DEENILNELNDPLREEIVNFNCRKLVATMPLFANADPNFVTAMLSKLRFEVFQPGDYIIREGAVGKKMYFIQHGVAGVITKSSKEMKLTDGSYFGEICLLTKGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETV---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
4 | 5k7lA | 0.24 | 0.10 | 3.14 | 2.12 | HHsearch | | DTEKVLQICPKDMRADICVHLNRKVFKEHPAFRLASDGCLRALAMEFQTVHCAPGDLIYHAGESVDSLCFVVSGSLEVIQDDEVVAILGKGDVFGDVFWATLAQSCANVRALTYCDLHVIKRDALQKVLEFYTAFSHSFSRNLILTYKRIVFKISDVKREEEERMKR--------------LPPDHPVRRLFQRFRQQKE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
5 | 4myiA | 0.09 | 0.09 | 3.36 | 0.51 | CEthreader | | ICRKLLNIVLGNLQVVLFRNIMTEALQQSEIFRQFSAEQLNDLADTAIVRDYPANYHILHK--KSVKYLIVLEGKVELFLDDESIGILTRGKSFGDQYVLNQQKFRHTVKSLDVCKIALITESCLADCLGDNNIDASIDHNNKKSIIKKMYIFRYLSEQQCNLLIEARTTRYEEGDYIIQEGEVGSRFYIIKNGEVEVTKNKRLRTLGKNDYFGERALLYDEPRTASIISKATSSVFLQIIQGPMLTHLEERIKMQDTKVEMHELETERIVKLVHHKPTQIRYALKCVSKRSIISLNQQNNIKLEREITAENDHPFIIRLVRTFKLVTGGELYDAIRKLGLLSKPQAQFYLGSIILAIEYLHERNIVYRDLKPENILLDKQGYVKLIDFGCAKKIQGRAYTLVGTPHYMAPEVILGKGYGCTVDIWALGVCLYEFICGPLPFGNDQ |
6 | 2x1gF | 0.06 | 0.06 | 2.50 | 0.73 | EigenThreader | | VVLRAEIAKRVQLVIHTVERYLKLQMNRVWDAEAYSNMNRAVKCVGTWIKNIGYTIEGCVTITAVLLEVVHKCYW------PCIHGCMTSCLKTMVNIIIQPDCHNYPKTAFVLIKMFLDSLSEITKTEWKRENDNEDIIVHIYMLFVSSVERHEILHCTDKPGIYPVEESCSTMALAFWYMLQDEVFATFMYCYDVLNDPTHWTKLEACIYSFQSVAELNVKLLGTALETMGSYGLNSSMSAQATLGLKELCRDCRMKNSDSVRLMFSIGKLMSLLRPTLFSSLNTPVLLVMQRTMPIFKRIAEMWVEESTPEQNFSNISDTMETFFGCLTQIIKKIAQRGMTLPESGAIRNSIQFLTHFVMQSRNEQTLYTAMMCVGYLTPRSQVDKFADILLAMNRKYAAEMAVWMKSLMSTPNFPTQLITDADKTRYTALIIKEKVNKRLLQ |
7 | 4d7sA2 | 0.33 | 0.11 | 3.36 | 0.92 | FFAS-3D | | EEREVLKELPHPLRLAVAMEIHGDVIEKVPLFKGAGEDFIRDIILHLEPVIYGPGEYIIRAGELGSDVYFINRGSVEVLSADEKTAILSEGQFFGEMALILRAPRTATVRARTFCDLYRLDKETFDRILSRYPEIAAQIQELAVRRKEEL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
8 | 7lftA | 0.35 | 0.12 | 3.48 | 1.24 | SPARKS-K | | DEKEVLKYLPDKLRAEIAINVHLDTLKKVRIFADCEAGLLVELVLKLQPQVYSPGDYICKKGDIGREMYIIKEGKLAVVADDGVTVVLSDGSYFGEISILNINRRTANIKSIGYSDLFCLSKDDLMEALTEYPDAKTMLEEKGKQILMK--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
9 | 5jonA | 0.87 | 0.29 | 8.14 | 3.01 | CNFpred | | DAQTNAAELNGPLREEIVNFNCRKLVASMPLFANADPNFVTAMLTKLKFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKGNKEMKLSDGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVAIDRLD---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
10 | 3qmzA | 0.07 | 0.05 | 2.11 | 0.67 | DEthreader | | PNFDTTLKLTIDSLKMIKSSLSTFLE-RQRR--------------------DDLLKIIG--------SGKHHDQVSKFMK--FGSKQGRVVVVFVLSRLLV---TQIGAWGCFDE-SANIQQIQNGLQVGK-------HTAVFITLLP--LK------------------------------------------HFG-RTLKGVLESLKRVILPSLVGKAGCGKTATWKTVIDAMA-F-INFRILFETLWFSSKIDHLLNKSEMFLDKLK--------------ISDSFD------------T-FGHDELDDKLSFSSFCSEIPSVS-LE----AHEVMRPDIVIPTLSYEIYYFRYTEFAASHLYTSRTRVRGTQTLRIETVDKYLPNQDLGNIDRIGMMTICPNWMTKTMSQLVFTDMLVIKLVEYSIIGKSVRAAR------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
|