>O60741 (444 residues) MEGGGKPNSSSNSRDDGNSVFPAKASATGAGPAAAEKRLGTPPGGGGAGAKEHGNSVCFK VDGGGGGGGGGGGGEEPAGGFEDAEGPRRQYGFMQRQFTSMLQPGVNKFSLRMFGSQKAV EKEQERVKTAGFWIIHPYSDFRFYWDLIMLIMMVGNLVIIPVGITFFTEQTTTPWIIFNV ASDTVFLLDLIMNFRTGTVNEDSSEIILDPKVIKMNYLKSWFVVDFISSIPVDYIFLIVE KGMDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVVRIFN LIGMMLLLCHWDGCLQFLVPLLQDFPPDCWVSLNEMVNDSWGKQYSYALFKAMSHMLCIG YGAQAPVSMSDLWITMLSMIVGATCYAMFVGHATALIQSLDSSRRQYQEKYKQVEQYMSF HKLPADMRQKIHDYYEHRYQGKIF |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 | | | | | | | | | | | | | | | | | | | | | | MEGGGKPNSSSNSRDDGNSVFPAKASATGAGPAAAEKRLGTPPGGGGAGAKEHGNSVCFKVDGGGGGGGGGGGGEEPAGGFEDAEGPRRQYGFMQRQFTSMLQPGVNKFSLRMFGSQKAVEKEQERVKTAGFWIIHPYSDFRFYWDLIMLIMMVGNLVIIPVGITFFTEQTTTPWIIFNVASDTVFLLDLIMNFRTGTVNEDSSEIILDPKVIKMNYLKSWFVVDFISSIPVDYIFLIVEKGMDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVVRIFNLIGMMLLLCHWDGCLQFLVPLLQDFPPDCWVSLNEMVNDSWGKQYSYALFKAMSHMLCIGYGAQAPVSMSDLWITMLSMIVGATCYAMFVGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPADMRQKIHDYYEHRYQGKIF |
Prediction | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCCHHHHHHHHHHHHHHHHHHHHHHCSSSSSCCCCSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCSSSCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC |
Confidence | 999999999998777887776544566667874211224677776653321247763313344545667788865445665433223320237787500111455333448763230346788887640587156899872669999999999999998776541136344217899999999999999999823158864896799569999999984338999999998999887504676403567666778899999999999999999999999999998888888999999999999999999999999999975147887632322666665322367999999999886427899899877899999999999999999999999999999737789999999999999998199999999999999999851779 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 | | | | | | | | | | | | | | | | | | | | | | MEGGGKPNSSSNSRDDGNSVFPAKASATGAGPAAAEKRLGTPPGGGGAGAKEHGNSVCFKVDGGGGGGGGGGGGEEPAGGFEDAEGPRRQYGFMQRQFTSMLQPGVNKFSLRMFGSQKAVEKEQERVKTAGFWIIHPYSDFRFYWDLIMLIMMVGNLVIIPVGITFFTEQTTTPWIIFNVASDTVFLLDLIMNFRTGTVNEDSSEIILDPKVIKMNYLKSWFVVDFISSIPVDYIFLIVEKGMDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVVRIFNLIGMMLLLCHWDGCLQFLVPLLQDFPPDCWVSLNEMVNDSWGKQYSYALFKAMSHMLCIGYGAQAPVSMSDLWITMLSMIVGATCYAMFVGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPADMRQKIHDYYEHRYQGKIF |
Prediction | 566264452445445554543545454556455545544444444444544554553314445445444445446544544664554444443034314531454444232421444432444353244241000001231000000000121333221100000012443210000001001100100010000000012220100222220011003120000000000000001012232222012022021011001000001002012002002202322222222110001000000000000000100000000013222200000110222202210000000000000011111100202000000000023123220100010030034134435403510520250056370365015102500312166434 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCCHHHHHHHHHHHHHHHHHHHHHHCSSSSSCCCCSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCSSSCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC MEGGGKPNSSSNSRDDGNSVFPAKASATGAGPAAAEKRLGTPPGGGGAGAKEHGNSVCFKVDGGGGGGGGGGGGEEPAGGFEDAEGPRRQYGFMQRQFTSMLQPGVNKFSLRMFGSQKAVEKEQERVKTAGFWIIHPYSDFRFYWDLIMLIMMVGNLVIIPVGITFFTEQTTTPWIIFNVASDTVFLLDLIMNFRTGTVNEDSSEIILDPKVIKMNYLKSWFVVDFISSIPVDYIFLIVEKGMDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVVRIFNLIGMMLLLCHWDGCLQFLVPLLQDFPPDCWVSLNEMVNDSWGKQYSYALFKAMSHMLCIGYGAQAPVSMSDLWITMLSMIVGATCYAMFVGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPADMRQKIHDYYEHRYQGKIF | |||||||||||||||||||
1 | 5u6oA | 0.85 | 0.62 | 17.52 | 1.00 | DEthreader | ---------------------------------------------------------------------------------------MQ---RQFTS-ML--PG-VNKFSLRMFGSQKAVEKEQERVKTAGFWIIHPYSDFRFYWDLIMLIMMVGNLVIIPVGITFFTEQTTTPWIIFNVASDTVFLLDLIMNFRTGTVNS--SEIILDPKVIKMNYLKSWFVVDFISSIPVDYIFLIVEK-G----RALRIVRFTKILSL-LRLLRL--S-RLIRYIHQWEEIFHMTYDLASAVVRIFNLIGMMLLLCHWDGCLQFLVPLLQDFPPDCWVSLNEMVNDSWGKQYSYALFKAMSHMLCIGYGAQAPVSMSDLWITMLSMIVGATCYAMFVGHATALIQSLDSSRRQYQKYYERYQGFEVFQPHGVTDTY-R------------- | |||||||||||||
2 | 5k7lA | 0.21 | 0.20 | 6.36 | 1.81 | SPARKS-K | EVMQKSSACSFMYGELTDKDTVEKVRQTFENYEMNSFEILMYKKNRTPVWFFVKIAPIRNEQDKVSDITAFKQPIEDDSCKG--WGKFARLTRALTSSRGQLAPSVQKGENVHKHSRLAEVLQLGSDPKTPPHIILHYCVFKTTWDWIILILTFYTAILVPYNVSFKTRQNNVAWLVVDSIVDVIFLVDIVLNFHTTFVG-PAGEVISDPKLIRMNYLKTWFVIDLLSCLPYDVINAFENVD-----------EGISSLFSSLKVVRLLRLGRVARKLDHYIE---------YGAAVLVLLVCVFGLAAHWMACIWYSIGDYEIIRNNSWLYGTPYQFPSKNSVYISSLYFTMTSLTSVGFGNIAPSTDIEKIFAVAIMMIGSLLYATIFGNVTTIFQQMYANTNRYHEMLNSVRDFLKLYQVPKGLSERVMDYIVSTWSMSRG | |||||||||||||
3 | 5u6oA | 0.99 | 0.76 | 21.20 | 2.38 | SPARKS-K | ---------------------------------------------------------------------------------------------MQRQFTSMLQPGVNKFSLRMFGSQKAVEKEQERVKTAGFWIIHPYSDFRFYWDLIMLIMMVGNLVIIPVGITFFTEQTTTPWIIFNVASDTVFLLDLIMNFRTGT--VNSSEIILDPKVIKMNYLKSWFVVDFISSIPVDYIFLIVEKGRA---------LRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVVRIFNLIGMMLLLCHWDGCLQFLVPLLQDFPPDCWVSLNEMVNDSWGKQYSYALFKAMSHMLCIGYGAQAPVSMSDLWITMLSMIVGATCYAMFVGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPADMRQKIHDYYEHRYQGKIF | |||||||||||||
4 | 5k7lA | 0.19 | 0.18 | 5.88 | 1.11 | MapAlign | CKLSGYHRAEVMQKSSACSFMYGELTDKDTVEKVRQTFENYEMNSFEILMYKKNRTPVWFFVKIAPIVVLFLCTFSDITAFKQPIEDDSCKGWGKFARLTRALTSSRGVLQENVHKHSRLAEVLQLGSDTPPHIILHYCVFKTTWDWIILILTFYTAILVPYNVSFKTRQNNVAWLVVDSIVDVIFLVDIVLNFHTTFVG-PAGEVISDPKLIRMNYLKTWFVIDLLSCLPYDVINAFE-----------NVDEGISSLFSSLKVVRLLRLGRVARKLDHYI---------EYGAAVLVLLVCVFGLAAHWMACIWYSIGDYEIIRNNSWLYQLWEGGPSKNSVYISSLYFTMTSLTSVGFGNIAPSTDIEKIFAVAIMMIGSLLYATIFGNVTTIFQQMYANTNRYHEMLNSVRDFLKLYQVPKGLSERVMDYIVSTWSMSRG | |||||||||||||
5 | 5u6oA | 0.98 | 0.74 | 20.77 | 1.18 | MapAlign | ----------------------------------------------------------------------------------------------QRQFTSMLQPGVNKFSLRMFGSQKAVEKEQERVKTAGFWIIHPYSDFRFYWDLIMLIMMVGNLVIIPVGITFFTEQTTTPWIIFNVASDTVFLLDLIMNFRTGTV---NSSEIILDKVIKMNYLKSWFVVDFISSIPVDYIFLIVE---------KGRALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVVRIFNLIGMMLLLCHWDGCLQFLVPLLQDFPPDCWVSLNEMVNDSWGKQYSYALFKAMSHMLCIGYGAQAPVSMSDLWITMLSMIVGATCYAMFVGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPADMRQKIHDYYEHRYQGKI- | |||||||||||||
6 | 5k7lA | 0.22 | 0.19 | 6.04 | 2.89 | HHsearch | MQGELTDKDTVIRNEQDKVFSDIT-AFKQPIED--DSC---------KGWGKFA-RLTRALTSS-RGVLQQLA-----PSVQ---KG-EN-VHKHSRLA----------EVLQLGSDILP-QYKQEAPKTPPHIILHYCVFKTTWDWIILILTFYTAILVPYNVSFKTRQNNVAWLVVDSIVDVIFLVDIVLNFHTTFVGP-AGEVISDPKLIRMNYLKTWFVIDLLSCLPYDVINAFENVDE-----------GISSLFSSLKVVRLLRLGRVARKLDHYIE---------YGAAVLVLLVCVFGLAAHWMACIWYSIGDYEIFRNNSWLYQLAEGGPSKNSVYISSLYFTMTSLTSVGFGNIAPSTDIEKIFAVAIMMIGSLLYATIFGNVTTIFQQMYANTNRYHEMLNSVRDFLKLYQVPKGLSERVMDYIVSTWSSRGI | |||||||||||||
7 | 5u6oA | 1.00 | 0.76 | 21.38 | 0.85 | CEthreader | ---------------------------------------------------------------------------------------------MQRQFTSMLQPGVNKFSLRMFGSQKAVEKEQERVKTAGFWIIHPYSDFRFYWDLIMLIMMVGNLVIIPVGITFFTEQTTTPWIIFNVASDTVFLLDLIMNFRTGTVNS--SEIILDPKVIKMNYLKSWFVVDFISSIPVDYIFLIVEKG---------RALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVVRIFNLIGMMLLLCHWDGCLQFLVPLLQDFPPDCWVSLNEMVNDSWGKQYSYALFKAMSHMLCIGYGAQAPVSMSDLWITMLSMIVGATCYAMFVGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPADMRQKIHDYYEHRYQGKIF | |||||||||||||
8 | 5k7lA | 0.19 | 0.18 | 5.66 | 1.37 | EigenThreader | ------LVAPQNTFDTQIVDWPDGFCKLSGYHRAEVMQKSSACSFMYG----ELTDFEILMYKKNRTPEQDKDITAFKQPIEDDSCKGWGKFARLTRALSRGVLQQLGENVHKHSRLAEVLQLGSDIPKTPPHIILHYCVFKTTWDWIILILTFYTAILVPYNVSFKTRQNNVAWLVVDSIVDVIFLVDIVLNFHTTFVGPAGEVISD-PKLIRMNYLKTWFVIDLLSCLPYDVINAFENVD-----------EGISSLFSSLKVVRLLRLGRVARKLDHYI----------------EVCVFGLAAHWMACIWYSIGDYEIFDEDTKTYQFNKWEGGPSKNSVYISSLYFTMTSLTSVGFGNIAPSTDIEKIFAVAIMMIGSLLYATIFGNVTTIFQQMYANTNRYHEMLNSVRDFLKLYQVPKGLSERVMDYIVSTWSMSRG | |||||||||||||
9 | 5u6oA | 0.96 | 0.74 | 20.71 | 1.54 | MUSTER | ---------------------------------------------------------------------------------------------MQRQFTSMLQPGVNKFSLRMFGSQKAVEKEQERVKTAGFWIIHPYSDFRFYWDLIMLIMMVGNLVIIPVGITFFTEQTTTPWIIFNVASDTVFLLDLIMNFRTGTV--NSSEIILDPKVIKMNYLKSWFVVDFISSIP--VDYIFL-------IVEKGRALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVVRIFNLIGMMLLLCHWDGCLQFLVPLLQDFPPDCWVSLNEMVNDSWGKQYSYALFKAMSHMLCIGYGAQAPVSMSDLWITMLSMIVGATCYAMFVGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPADMRQKIHDYYEHRYQGKIF | |||||||||||||
10 | 5va1A | 0.23 | 0.19 | 6.01 | 1.13 | MUSTER | ------------------------------VRRGHVAPQNTFLDTIIRKFEGQSRKFIIANARVENCGYSRAEVMQRPCTCDFLHGPRTQRRAAAQIAQALLGAEERKVEIAFYRKDGSCGAVIMFILNFEVWTILHYSPFKAVWDWLILLLVIYTAVFTPYSAAF----LCQPLAVVDLIVDIMFIVDILINFRTTYVNAN-EEVVSHPGRIAVHYFKGWFLIDMVAAIPFDLLI------------------------GLLKTARLLRLVRVARKLDRYSEY---------GAAVLFLLMCTFALIAHWLACIWYAIGNMEQ--PIGWLHNKPYGGPSIKDKYVTALYFTFSSLTSVGFGNVSPNTNSEKIFSICVMLIGSLMYASIFGNVSAIIQRLYSGTARYHTQMLRVREFIRFHQIPNPLRQRLEEYFQHAWSYNGI | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |