Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| SS Seq | CCCCCSSSSSSSSSCCCCCCCCCCHHHHHHHHHHHCCCSSSSSCCCCCHHHHHHHHCCCCCCHHHCCCCCSSSSCCHHHHHHCCCSSSSSSCCHHHHHCCHHHHHHHHCCCCSSSSCCCCCCCCHHHHHHHCCSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TVTDKKIAILGFAFKKDTGDTRESSSIYISKYLMDEGAHLHIYDPKVPREQIVVDLSHPGVSEDDQVSRLVTISKDPYEACDGAHAVVICTEWDMFKELDYERIHKKMLKPAFIFDGRRVLDGLHNELQTIGFQIETIGKKVSSKRIPYAPSGEIPKFSLQDPPNKKPKV |
1 | 2o3jA2 | 0.53 | 0.44 | 12.58 | 1.17 | DEthreader | | TVTDKKIAIFGFAFKKNTGDTRESSAIHVIKHLMEEHAKLSVYDPKVQKSQMLNDLASV-T-SAQDVERLITVESDPYAAARGAHAIVVLTEWDEFVELNYSQIHNDMQHPAAIFDGRLIL--DQKALREIGFRTFA-IGTSPDQ------------------------- |
2 | 3khuB3 | 1.00 | 0.83 | 23.22 | 2.06 | SPARKS-K | | -VTDKKIAILGFAFKKDTGDTRESSSIYISKYLMDEGAHLHIYDPKVPREQIVVDLSHPGVSEDDQVSRLVTISKDPYEACDGAHAVVICTEWDMFKELDYERIHKKMLKPAFIFDGRRVLDGLHNELQTIGFQIETIGKKV---------------------------- |
3 | 3khuB | 1.00 | 0.84 | 23.39 | 0.76 | MapAlign | | TVTDKKIAILGFAFKKDTGDTRESSSIYISKYLMDEGAHLHIYDPKVPREQIVVDLSHPGVSEDDQVSRLVTISKDPYEACDGAHAVVICTEWDMFKELDYERIHKKMLKPAFIFDGRRVLDGLHNELQTIGFQIETIGKKV---------------------------- |
4 | 3khuB | 1.00 | 0.84 | 23.39 | 0.62 | CEthreader | | TVTDKKIAILGFAFKKDTGDTRESSSIYISKYLMDEGAHLHIYDPKVPREQIVVDLSHPGVSEDDQVSRLVTISKDPYEACDGAHAVVICTEWDMFKELDYERIHKKMLKPAFIFDGRRVLDGLHNELQTIGFQIETIGKKV---------------------------- |
5 | 3khuB | 1.00 | 0.84 | 23.39 | 1.65 | MUSTER | | TVTDKKIAILGFAFKKDTGDTRESSSIYISKYLMDEGAHLHIYDPKVPREQIVVDLSHPGVSEDDQVSRLVTISKDPYEACDGAHAVVICTEWDMFKELDYERIHKKMLKPAFIFDGRRVLDGLHNELQTIGFQIETIGKKV---------------------------- |
6 | 2o3jA2 | 0.56 | 0.46 | 13.21 | 2.04 | HHsearch | | TVTDKKIAIFGFAFKKNTGDTRESSAIHVIKHLMEEHAKLSVYDPKVQKSQMLNDLASVTS-AQD-VERLITVESDPYAAARGAHAIVVLTEWDEFVELNYSQIHNDMQHPAAIFDGRLILDQ--KALREIGFRTFAIGTSPDQ-------------------------- |
7 | 3khuB3 | 1.00 | 0.83 | 23.22 | 2.13 | FFAS-3D | | -VTDKKIAILGFAFKKDTGDTRESSSIYISKYLMDEGAHLHIYDPKVPREQIVVDLSHPGVSEDDQVSRLVTISKDPYEACDGAHAVVICTEWDMFKELDYERIHKKMLKPAFIFDGRRVLDGLHNELQTIGFQIETIGKKV---------------------------- |
8 | 3khuB | 1.00 | 0.84 | 23.39 | 0.48 | EigenThreader | | TVTDKKIAILGFAFKKDTGDTRESSSIYISKYLMDEGAHLHIYDPKVPREQIVVDLSHPGVSEDDQVSRLVTISKDPYEACDGAHAVVICTEWDMFKELDYERIHKKMLKPAFIFDGRRVLDGLHNELQTIGFQIETIGKKV---------------------------- |
9 | 3itkA | 1.00 | 0.82 | 22.89 | 2.28 | CNFpred | | TVTDKKIAILGFAFKKDTGDTRESSSIYISKYLMDEGAHLHIYDPKVPREQIVVDLSHP---EDDQVSRLVTISKDPYEACDGAHAVVICTEWDMFKELDYERIHKKMLKPAFIFDGRRVLDGLHNELQTIGFQIETIGKKV---------------------------- |
10 | 2o3jA | 0.53 | 0.44 | 12.58 | 1.17 | DEthreader | | TVTDKKIAIFGFAFKKNTGDTRESSAIHVIKHLMEEHAKLSVYDPKVQKSQMLNDLASV-T-SAQDVERLITVESDPYAAARGAHAIVVLTEWDEFVELNYSQIHNDMQHPAAIFDGRLIL--DQKALREIGFRTFA-IGTSPDQ------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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