Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420
| | | | | | | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC MSADGAEADGSTQVTVEEPVQQPSVVDRVASMPLISSTCDMVSAAYASTKESYPHIKTVCDAAEKGVRTLTAAAVSGAQPILSKLEPQIASASEYAHRGLDKLEENLPILQQPTEKVLADTKELVSSKVSGAQEMVSSAKDTVATQLSEAVDATRGAVQSGVDKTKSVVTGGVQSVMGSRLGQMVLSGVDTVLGKSEEWADNHLPLTDAELARIATSLDGFDVASVQQQRQEQSYFVRLGSLSERLRQHAYEHSLGKLRATKQRAQEALLQLSQVLSLMETVKQGVDQKLVEGQEKLHQMWLSWNQKQLQGPEKEPPKPEQVESRALTMFRDIAQQLQATCTSLGSSIQGLPTNVKDQVQQARRQVEDLQATFSSIHSFQDLSSSILAQSRERVASAREALDHMVEYVAQNTPVTWLVGPFAPGITEKAPEEKK |
1 | 1sziA | 0.73 | 0.33 | 9.28 | 2.14 | FFAS-3D | | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NRLPLTEAELALIATPPEDSDMASLQQQRQEQNYFVRLGSLSERLRNHAYEHSLGKLQNARQKAQETLQQLTSVLGLMESVKQAKP--------------------------------EQVEARALSMFRDITQQLQSMCVALGASIQGLPSHVREQAQQARSQVNDLQATFSGIHSFQDLSAGVLAQTRERIARAREALDNTVEYVAQNTPAMWLVGPFAPGITE------- |
2 | 1sziA | 0.74 | 0.33 | 9.41 | 1.12 | SPARKS-K | | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NRLPLTEAELALIATPPEDSDMASLQQQRQEQNYFVRLGSLSERLRNHAYEHSLGKLQNARQKAQETLQQLTSVLGLMESVKQA--------------------------------KPEQVEARALSMFRDITQQLQSMCVALGASIQGLPSHVREQAQQARSQVNDLQATFSGIHSFQDLSAGVLAQTRERIARAREALDNTVEYVAQNTPAMWLVGPFAPGITE------- |
3 | 5ic0A | 0.13 | 0.11 | 3.76 | 1.14 | CNFpred | | -----------------------GCLDSVMENKVLGEAMTGISQNAKNG--NLPEFGDAIATASKALCGFTEAAAQAAYLVGV-EPTQFARANQAIQMACQSLGEPG----CTQAQVLSAATIVAK----HTSALCNSCRLASARTNPTAKRQFVQSAKEVANSTANLVKTIKDGDFTEENRAQCRAATAPLLEAVDNLSAFASSVPAQISPEGRAAMEPI------------ISAKTMLESAGGLIQTARALAVNRDPPRWSVLAGHSRTVSDSIKLITSMRDKAQLECETAIAALNSCLRDLDQASLALAPREGISQEALHTQMLTAVQEISHLIEPLASAARAEASQLGHKVSQMAQYFEPLTLAAVGAASKTLS-HPQQMALLDQTKTLAESALQLLYTAKEAGGN------------------------ |
4 | 5hb4B | 0.09 | 0.09 | 3.41 | 1.00 | MapAlign | | EPKGPFDMQKSLFHSLLNVLITLTVSEEEQGMRGYLVTLKYRVLRILQLLWKSPLSASLVMDELRATNFLFHMLLRCEFLLSASLAYIDYLASRAAIFEYIGKDALNGQIFYDIRKAQEILALKRKEYELETVELEEKVLIEWLTVRNRANLLLTARLNLLQAWANLLLVIESNDFKSTPKMAFLLQALQAILPTLEAFSSLKSDEAFELARVAKVLDFGLDREQFTVGNLIGDKLFQLFQLCLSAISLYYSICYRYLVTNARARTLKAITLYGDRLLNVICDDAYGSDTTCQTAAMILLNALVHTSRASSPADVDCPIIDALNRFIGVLVDPSQQYTSAKLALLLQLC-QTRQGAKYVLQLFRALEQVF---AADSESGVPRVVALERHYALLVALARVVGAAVTARGAHNIVQGRKFLTQHRGLVVHVLKK- |
5 | 1sziA | 0.74 | 0.33 | 9.34 | 6.42 | HHsearch | | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NRLPLTEAELALIATPPEDSDMASLQQQRQEQNYFVRLGSLSERLRNHAYEHSLGKLQNARQKAQETLQQLTSVLGLMESVKQA-------------------------------K-PEQVEARALSMFRDITQQLQSMCVALGASIQGLPSHVREQAQQARSQVNDLQATFSGIHSFQDLSAGVLAQTRERIARAREALDNTVEYVAQNTPAMWLVGPFAPGITE------- |
6 | 5ic0A | 0.14 | 0.12 | 4.10 | 1.39 | FFAS-3D | | -----------------HMAPGQKECDNALR--QLETVRELLENPYFGCLDS---VMENSKVLGEAMTGISQNAKNGNLPAIATASKALCGFTEAAAQAAYLVGVSDPNSQAGQPTQFARANQAIQMACQSLQAQVLSAATIVAKHTSALCNSCRLASRQFVQSAKEVANSTANLVLDGDFTEENRAQCRAATAPLLEAVDNL-----SAFASNPEFSSVPAQISPEGRAAMEPIVISAKTMLESAGGLIQTPRWSVLAGHSRTVSDSIKKLITSMRDKQLECETAIAALNSCLRDLDQASLAAVSQQLAPREGIS------QEALHTQMLTAVQEISHLIEPLASAARAEASQLGHKVSQMAQYFEPLTLALDQTKTLAESALQLLYHTQEALEEAVQMMTEAVEDLTT------------------------ |
7 | 5ic1A | 0.13 | 0.11 | 3.77 | 1.14 | CNFpred | | -----------------------GCLDSVMEN--SKVLGEAMTGISQNAKNGLPEFGDAIATASKALCGFTEAAAQAAYLVGVS-PTQFARANQAIQMACQSLGEP-----GCTQAQVLSAATIVAKHTSALCNSCRLASARTNPTAKRQFVQSAKEVANSTANLVKTIKAL-DGDFTEENRAQCRAATAPLLEAVDNLSAFAFSSVPAQISPEGRAAMEPIV----------ISAKTMLESAGGLIQTARALAVNPDPPRWSVLAGHSRTVSDSIKLITSMRDKAQLECETAIAALNSCLRDLDQASLALAPREGISQEALHTQMLTAVQEISHLIEPLASAARAEASQLGHKVSQMAQYFEPLTLAAVGAASKTLS-HPQQMALLDQTKTLAESALQLLYTAKEAGGN------------------------ |
8 | 5j1iA | 0.09 | 0.07 | 2.70 | 1.39 | FFAS-3D | | ---------------------------------------SRCQRCISELKD----IRLQLEACETRTVHRLRLPLDKEP--ARECAQRIAEQQKAQ-AEVEGLGKGV-------ARLSAEAEKVLAPTLRSELELTLGKLEQVRSLSAIYLEKLKTISLRGTQGAEEVLRAHEEQLKEAQAVPATLPELEATKASLKKLRAQ-AEAQQPTFDALRD------------------ELRGAQEVGERLQQRHVERWRERVAQLLERWQAVLAQTDVRQRELEQLGR----QLRYYRESADPLGAWLQDARRRQEQIQAMDSQAVREQLRQE-QALLEEIER-HGEKVEECQRFAKQYINAIKDYELQLVTYKAQLEKVQSGSESVIQEYVDLRTHYSELTTLTSQYIKFISET----------------------- |
9 | 4iggA | 0.12 | 0.10 | 3.53 | 1.10 | CNFpred | | -------------------------AKRQQELK-DVGHRDQMAAARGILQKNVPILYTASQACVAAYKANRDLIYKQLQQAVTGISNAAQA-GGELAYALNNFDKQIIVDPLSEERFRPSLEERLESIISGAALMADSTRDDRRERIVAECNAVRQALQDLLSEYMGN-RKERSDALNSAIDKMTTRDLRRQLRVMDHVSDSFLETPLLVLIEAAKNGNEKEVKEYAQVF--REHANKLIEVANLACSISNEEGVKLVRMSASQLEALCPQVINAALALAAKP--QSKLAQENMDLFKEQWEKQVRVLTDAVDD---------TSIDDFLAVSENHILEDVNKCVIALQEDVDGLDRTAGAIRGRAARVIHVVTSEMD-GVYTEKVLEATKLLSNTVMPRFTEQVEAAVEAL---------------------- |
10 | 6z9lA | 0.12 | 0.11 | 3.75 | 1.37 | FFAS-3D | | ---------------------QAIVDQKQQVADTAKKEKDAIDQSVKDQQAVVDQNKDALDQSQQAVTDQAKEQVATDTQAVDEQQKVVDQAQTDVNQQQAVVDEKAKETNAAKVQNVTAAKQEQAKLKVKAEKEQAAKEAELANKAKDQKTKDDQAVADQQTVVTTSQEKVTDAKADTAAKQADLTAKENALKDKQAATKQA----QNTLDNSKEELKGHKGINLPPADQKKELSVYTTELLNDVRKKELQQEIASNQEKLATAQQAESDAQQARSASQQALNTAKTTQATAEKELSVHKATLANLQAVATKSTTNYEEKVRQTAEKSLQQTKDQLATINELIQNRAAVL-EKAKTNVAEAQAIEQTSAKVLKEKQEAQKAEENTLNSLKEVLDLAKENLNQKQVALKT------------------------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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