Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| SS Seq | CCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCC DSSGVIDLFGDAFGSSASEPQPASQAASSSSASADLLAGFGGSFMAPSPSPVTPAQNNLLQPNFEAAFGTTPSTSSSSSFDPSVFDGLGDLLMPTMAPAGQPAPVSMVPPSPAMAASKALGSDLDSSLASLVGNLGISGTTTKKGDLQWNAGEKKLTGGANWQPKVAPATWSAGVPPSAPLQGAVPPTSSVPPVAGAPSVGQPGAGFGMPPAGTGMPMMPQQPVMFAQPMMRPPFGAAAVPGTQLSPSPTPASQSPKKPPAKDPLADLNIKDFL |
1 | 6h7fA | 0.08 | 0.08 | 3.17 | 0.62 | CEthreader | | ATDPSIYTNGASGGWSENYYIRGYASSTNDMSMNGLFGITPFYRTSPEKGPSALLNGMPPAGSVGGTVNLVTKYAADEPFARLTTTYMSDAQFGGHVDVGRRFGENKEFGVRINGMYRDGDAAVNDQSKESRLFSLGLDWQGENARVFVDAYDALDHVDGVTRGVNVSTAVGIPKPPKADTLLSPDWGSVETKDKGAMIRGYAAYGQSTTEYKYNGASAGTITSSTGTLSSTLGQLAFDVDKKSADAGFKGKFETGSVKHQWVANATYYNHTQD |
2 | 7kdtA | 0.05 | 0.04 | 2.14 | 0.63 | EigenThreader | | ENYDKIISECSKEIDAEGKYMAEALLLRATFYLLIGAKPDLDKVISLKEANVKLRANALIKRGSMYMQQQQPLLSTQDFNMAADIDPQNADVYHHRGQLKILLDQVEEAVADFDECIRLRPESALAQAQKCFALYRQAYTGN---NSSQIQAAMKGFEEVIKKFPRCAEGYALYAQALTDQQQFGKADEMYDKCIDLEPDNATTYVHKGLLQLQWKQD----------LDRGLELISKAIEIDNKCDFAYETMGTIEVQRGNMEKAIDMFNKAI |
3 | 2xd8A3 | 0.13 | 0.11 | 3.70 | 0.54 | FFAS-3D | | -ATDKYALYLKLFSGEMFKGFQHETIARDLVTKRTLKNGKSLQFIYTGRMTSSFHTPGT-------PILGNADKAPPVAEKTIVMDDL-LISSASATNFVEPGGTQIRVGSGTNESDAFTASALVNAFYDAAAAMDEKGPFLGKYGVKYGGTTGETSPGNLGSPTPENANATGGVNNDYGTNAELGAKSCGLIFQKEAAGVVEAIGPQVQVTNGDVSVIYQGDVILGRMAMGADNPAAAV---------------------------------- |
4 | 4nl6A | 0.12 | 0.10 | 3.59 | 1.18 | SPARKS-K | | ASFKHALKNGDICETSGKPKTTPLQQWKVGDKCSAIWSEDGCIYPATIASIDFKRETCVV-----------VYTGYGNREEQN----LSDLLSPI-------CEVANNIEQNAQENENESQVS----------TDESENSRSPGNKSDNIKPKSAPWNSFLPPPPPMPGPRLGPGKPGLKFNGPPPPPPPPPPHLLSCWLPPFPSGPPIIPPPPPICPDSLDDADALGSMLISWYMSGTGYYMGFRQNQKEGRCSHSLN--------------- |
5 | 6ulwA | 0.06 | 0.05 | 2.02 | 0.67 | DEthreader | | -----------GLYTQSQLGDAEALGAAVHRVLNVGIVMFHNQIRARTDFLRWLAPNFAFA---------DLSA-MT--CMINGAERPAFVFSAGVLTFEETSEQLRPAEATSFTELGKP-IPGITIRVQIKG--TMKGYY--RN-DEANQEVFHTGDLGFLLTLTGRYHYEIEAAEEVPASQHIKARIIPVQKHA---------FPKT--G----------------------KIERAQL---------QTKAVEPEEYWKDEAYFHELIESG |
6 | 6h7fA | 0.07 | 0.07 | 2.84 | 0.92 | MapAlign | | DTYAGGQVATSSNVGFLGSKDTPFNTISYTDKYIEDKQAKDITEVWSENYYIRGYASSTNDMSMNGLFGITPFYRTSPEMFGRVTTYMSDAQFGGHVDVGRRFGENKEFGVRINGMYRDGDAAVNDQSKESRLFSLGLDWQENARVFVDAYDALDHVDGEYDFSDQLMAYAAYGQSTTEYK-------YNGASAGTITSSTGTLSSTLGQKKSADAGFKGKFETGSVKHQWVANATYYNHTQDDYGYRIIPGFSDPVITNIYDPNPNWGPKP-- |
7 | 5c2vC | 0.09 | 0.08 | 3.23 | 0.72 | MUSTER | | ---------GQPRVISTIQTGATWEPLGREEPLTVPEVHFRVKHSPFKSEERGQTTGLIWDLGDEGWGSWKNTKYIRGGRYLPPFRHEGFTGHPDEIVGATSSRVCGRDPGFVFRSENFSPMRLE-ALICYIRALEFTGSPFRNADGSLTEAQKREDPKVG-PGDPMDPRALFSDAQTHDVGTGRVGVNGFRSTPGKVFNISALEAGEDPYGVESNTPIIGLDLVKETPTLRDIYASGTGGARTLMDTINNTVNDKDMHGRTSHLKQQELQDYL |
8 | 4c0bD | 0.38 | 0.04 | 1.08 | 0.50 | HHsearch | | -------------------------------------------------------------------------------------------------------------------------------------NTGISNSNLNKSDSQWAAKDDEITST------------------------------------------------------------------------------------------------------------------- |
9 | 5fokA | 0.07 | 0.07 | 2.77 | 0.51 | CEthreader | | GALTLADALRTTPGITFGADRPFIRGFNAESDTFLDGMRDVASQTREVFNVEQPGSAYTGAGSTGGSLNLISKTAKQDNFTDAGFTWGSDQTRRTTLDVNRMIGDNAAFRLNLMKHDAHVAGRDEVSVSRWGVAPTVTFGFDTPTRATLSYYHLSTDDMPDYGLPLTNPSKPASVDRDNFYGLKDRDYRKSTTDSGTFRIESNSTRLVRTTLDYIVSNPDDSRGNVANGYVYRSAKSRNSTSKGWVNQTDLKANFETGFIKHTLVTGLEFSYED |
10 | 4g1tA | 0.03 | 0.03 | 1.89 | 0.57 | EigenThreader | | IESPELDCEEGWTRLKCGGCFEKALEKKPKNPEFTSGLAIASYRLDNWPPSQNAPDNQYLKVLLALKLHKMRGEGEKLVEEALEKAPGVTDVLRSAAKFYRRKDEPDKAIELLKKALEYIPNNAYLHCQIGCCYRAKVFQVMNLGKRKLLELIGHAVAHLKKADEANDNLFRVCSILASLHDQYEEAEYYFQKEFSKELTPVAKQLLHLRYGNFQLYQMKCEDKAIHHFIEGVKINQKSREKEKMKDKLQKIAKMRLSKNGDSEALHVLAFLQE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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