Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380
| | | | | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCHHHHHCCCCCCCCSSSCCCCSCCCCCCCCCCCCCCCCHHHHSSSCCSSCCHHHHHHHHHHHCCCCCCCSSSSCCCSCCCCCCCCCCCCCCSCCCCCCCCCSSCSSSCCCCCCCCCCHHHHHCCCCCCSSSCCCCCCCCCCHHHHCCCCCCCSSSCCCCCCCCCCCCCCHHHCCCCCCCSSSCCCCCCCCCCCCHHHHCCCCCCCSSSCCCCCCCCCCHHHCCCCCCCSSSCCCCCCCCCCHHHCCCCCSSSCCCCCCCCCCCCCCCCCSSSCCCCCCCSCCCCCCCCCCCSSSCCCCCCCCCCHHHHHCCCCCCSSSCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCSSCCCHHHCCCCHHHCCHHHCCCCCHHHHHHHCC LHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFDDCTLNGVGNFRASDNDRVIDPGKVETLTIRRLHIPRFYLFYDLSTLYSLTERVKRITVENSKVFLVPCLLSQHLKSLEYLDLSENLMVEEYLKNSACEDAWPSLQTLILRQNHLASLEKTGETLLTLKNLTNIDISKNSFHSMPETCQWPEKMKYLNLSSTRIHSVTGCIPKTLEILDVSNNNLNLFSLNLPQLKELYISRNKLMTLPDASLLPMLLVLKISRNAITTFSKEQLDSFHTLKTLEAGGNNFICSCEFLSFTQEQQALAKVLIDWPANYLCDSPSHVRGQQVQDVRLSVSECHRTALVSGMCC |
1 | 2a0zA | 0.18 | 0.17 | 5.54 | 1.33 | DEthreader | | EYNNIQH-LFSHSLHGLFNVRYLNLKRSFTKLPKIDDFSFQW-LKCLEHLNMEDNDIP---GIK-SNMFTGLINLKYLSLSNSFTSLRTLTN--ETFVSLAHSPLHILNLTKNKI-S-K-IES-DAF-SWLGHLEVLDLGLNEIGQLTGQEWRGLENIFEIYLSYNKYL-QL-TRNSFA-LVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLELEKLEILDLQHNNLALWIYFLLSHLHILNLESNGFDEIVFKLFELKIIDLGLNNLNTLPASFNQVSLKSLNLQKNLITSVEKKVFGPARNLTELDMRFNPFDCTCSIAWFVNWINETHTNIPELSSHYLCNTPPHYHGFPVRLFDTSSC------------- |
2 | 5a5cA | 0.19 | 0.16 | 5.17 | 2.41 | SPARKS-K | | --------------MACPPKCRCEKLLFYCDSQGFHS-VPNGLPSQLLGLSLRHNQLQSLPNGV----FDKLTQLTWLHLDHNQLQSLP------NGVFDKLTKLTELILSSNQLQSL-----PNGTFDKLTNLQNLDLSFNQLQSLPNGVFDKLTNLQTLHLRSNQLQSLPNGVF---DKLTSLTFLDLSTNQLQSL--PNGVFDKLTNLRELHLEHNQLQSLPNGFDKLTSLTTLFLQWNQLQSLPNGVF-----------------DKLTNLEKLDLTGNQLQSLPNGDKLTNLKILLLDNNQLQSLPNGVFDKLKSLTTVGLSGNLWECSPRVCALASWLGSF---QGRWEHSILCHSPDHTQGEDILDAVHGFQLCW---------- |
3 | 4u7lA | 0.19 | 0.18 | 5.66 | 0.61 | MapAlign | | YLNNNELTAVPSLGAASSHVVSLFLQHNKIR---SVEGSQLKAYLSLEVLDLSLNNITE--VR--NTCFPHGPPIKELNLAGNRIGTLELGAF-----DGLSRSLLTLRLSKNRI--TQ-LP-VR-AF-KLPRLTQLDLNRNRIRLIEGLTFQGLNSLEVLKLQRNNIS--KLTDGAFW-GLSKMHVLHLEYNSLVEV--NSGSLYGLTALHQLHLSNNSIARIHRKGWFCQKLHELVLSFNNLTRLSLAELSSLSVLRLSHNSISHIAFGLRSLRVLDLDHNEISIESGFSGLDSLSKLTLFGNKIKSVAKRAFSGLEGLEHLNLGGNAIRS--VQFDAFVKMKNL-KELHISSVTATCAHPESLKGQSIFSVPPESFVC----------- |
4 | 3a79A | 0.59 | 0.56 | 16.03 | 0.39 | CEthreader | | LHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFHPMPDSCQWPEKMRFLNLSSTGIRVVKTCIPQTLEVLDVSNNNLDSFSLFLPRLQELYISRNKLKTLPDASLFPVLLVMKIASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNKNSQKEQG--SAKCSGSGKPVRSIICP------------------- |
5 | 3a79A | 0.59 | 0.56 | 16.10 | 1.95 | MUSTER | | LHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFHPMPDSCQWPEKMRFLNLSSTGIRVVKTCIPQTLEVLDVSNNNLDSFSLFLPRLQELYISRNKLKTLPDASLFPVLLVMKIASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPIDYLSRWLNKNSQKEQG---SAKCSGSGK---------PVRSIICP---------- |
6 | 4lxrA | 0.18 | 0.17 | 5.50 | 0.95 | HHsearch | | LELRAN--IEEMPSHLFDDLEN--LESIEFGSNKLRQMPRGI-FGKMPKLK--QLNLWSNQLHNLTKHFEGATSVLGIDIHDNGIEQLPHD------VFAHLTNVTDINLSANLFRSLPQGATLPRLFEHSTQITNISLGDNLLKTLPATLLEHQVNLLSLDLSNNRLTHLPDSLF---AHTTNLTDLRLEDNLLTGIS--GDIFSNLGNLVTLVMSRNRLRTIDRAFVSTNGLRHLHLDHNDIDLQQPLFMHGLLTLNLRNNSIIFVYNTMLQLRELDLSYNNISSLGYEDFLSQNLHVNMTHNKIRRIALPEDV-NNNLVHVDLNDNPLVCDCTILWFIQLVRGVHKQFKLRTDRLVCSQPNVLEGTPVRQIEPQTLICPLDFALVINCH |
7 | 3j0aA | 0.20 | 0.19 | 6.03 | 1.80 | FFAS-3D | | LDLGSSKILHPDAFQGLFHLFELRLYFCGLSDAVLKD-GYFRNLKALTRLDLSKNQIRS---LYLHPSFGKLNSLKSIDFSSNQIFLVCEVDWGKCMNPFRNMVLEILSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGEL---YSSNFYGLPKVAYIDLQKNHIAII--QDQTFKFLEKLQTLDLRDNALTTIHFFLLRVPHLQILILNQNRFSSCSGDENPSLEQLFLGENMLQGVFSHLTALRGLSLNSNRLTVLSHNDLPANLEILDISRNQLLAPNPD---VFVSLSVLDITHNKFICECELSTFINWLNHTNVTIAGPPADIYCVYPDSFSGVSLFSLSTE--------------- |
8 | 3a79A | 0.57 | 0.53 | 15.18 | 1.12 | EigenThreader | | LKSIESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSTDESFNELLKLLRY--ILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVESKVFL-VPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFHPMPDSCQWPEKMRFLNLSSTGIRVVKTCIPQTLEVLDVSNNNLDSFSLFLPRLQELYISRNKLKTLPDASLFPVLLVMKIASNQLKSVPL------TSLQKIWLHTNPWDCSCPRIDYLSRWLNKNSQKEQGS---AKCSGS---GKPVRS------IICP--------- |
9 | 5d3iA | 0.68 | 0.64 | 18.30 | 10.86 | CNFpred | | LHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFHPMPDSCQWPEKMRFLNLSSTGIRVVKTCIPQTLEVLDVSNNNLDSFSLFLPRLQELYISRNKLKTLPDASLFPVLLVMKIRENAVSTFSKDQLGSFPKLETLEAGDNHFVCSCELLSFTMETPALAQILVDWPDSYLCDSPPRLHGHRL--------------------- |
10 | 4u7lA | 0.16 | 0.14 | 4.77 | 1.33 | DEthreader | | NQHNKIRSVEGSQLKAYLSLEVL-DL-SLNNITEVRTCFPHG--PPIKELNLA-GNRIGT--LE-LGAFDGLSSLLTLRLSKNRI-TQ--LP--VR--AFKLPRLTQLDLNRN-R-IRL-IE-GL-TFQGLNSLEVLKLQRNNISKLTDGAFWGLSKMHVLHLEYNSLVE-VN-SGSL-YGLTALHQLHLSNNSIARI--HRKGWSFCQKLHELVLSFNNLTRLDEESLALSSLSVLRLSHNSISHIAGAFLRSLRVLDLDHNEISTIAFSLDSLSKLTLFGNKIKSVAKRFGLEGLEHLNLGGNAIRSVQFDAFVKMKNLKELHISSDSFLCDCQLKWLPPWLIGRM-LQAFVT--ATCAHPESLKGQSIF-SVPP-ESFV--CDD-F--- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
|