Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420
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| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VPKNFHSMQNLCPPQTNGTPEGRQGPGGLKGGLDKSRTMTPAGGSGSGLSDSGRNSLTSLPTYSSSYSQHLAPLSASTSHINRIGTASYGSGSGGSSGGGSGYQDLGTSDSGRASSKSGSSSSMGRPGHLGSGEGGGGGLPFAACSPPSPSALIQELEERLWEKEQEVAALRRSLEQSEAAVAQVLEERQKAWERELAELRQGCSGKLQQVARRAQRAQQGLQLQVLRLQQDKKQLQEEAARLMRQREELEDKVAACQKEQADFLPRIEETKWEVCQKAGEISLLKQQLKDSQADVSQKLSEIVGLRSQLREGRASLREKEEQLLSLRDSFSSKQASLELGEGELPAACLKPALTPVDPAEPQDALATCESDEAKMRRQAGVAAAASLVSVDGEAEAGGESGTRALRREVGRLQAELAAERRARER |
1 | 6yvuA | 0.10 | 0.07 | 2.50 | 1.16 | FFAS-3D | | --------------------------------------------------------------------------------------------------------------------------------------------------NMKPSEILSLIEEATKMFEDRREKAERTMSKKETKLQENRTLLTEEIEPKLEKLRNEKFLEFQSTQTDLEKTERIVSYEYYNIKHKHTSIRETLENGETRMKMLNEFVKKTSEEIDSLNEDVEEIKLQKEKLENKENGLLNEISRLKTSLSIKVENLNDTTEKSKALESEIASSSAKLIEKKSAYANTEKDYKMVQEQLSKQRDEELVSTLADGGYNAQLAKAKTELNEVSLAIKKSSMKMELLKKELLTKEATKDNELNVKHVKQCQETCDKLRARLVE |
2 | 6yvuA | 0.10 | 0.09 | 3.37 | 1.33 | SPARKS-K | | RGRLRKRVTIIPLDKIYTRPISSQVLDLAKKIAPGKVE-----------------LAINLIRFDESITKAMEFIFGNSLICEDPETAKKITFHPKIRARSITLQGDVYDPEGT------------------LSGGSRESLL----------VDIQKYNQIQKQIETIQADLNHVTEETQYATSQKTKTIQSDLNLSLHKLDLAKRNLDANPSSQIIARNEEILRDIGECENEIKTKQMSLKKCQEEVSTIEKDMKEYDSKLNELKKELKLLAKELEEQESESERKYDLFQNLELETEQLSSELDSNKTLLHNHLKSIESLKLENSDLEGKIRGVEDDLVTVQTELNEEKKRLMDIDDELNELETLIKKKQDEKKSSELELQKLVHDLNKYNMEKIIEDLDTYRERSKQLNEKFQENMIENVEKKEA |
3 | 2tmaA | 0.13 | 0.08 | 2.60 | 1.00 | CNFpred | | ------------------------------------------------------------------------------------------------------------------------------------------------------EADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKK--ATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKED--------------KYEEEIKVLSDKLKEAETRAEFAER----------------SVTKLEKSIDDLEDELYAQKLKYKA |
4 | 6yvuA | 0.05 | 0.05 | 2.45 | 1.13 | MapAlign | | ----VEELIIDGFKSYATRTVITDWDPQFNAITGLNGSGKSNILDAICFVLGIASMSTVRASSLQDLIYKRGQAGVTKASVTIVFDNTDKSNSPIGFTNSPQISVTRYLINGHRAPQQSVLQLFQSVQLNINNPNFLIMQGGTKMFEDRREKAERTMSKKETKLQENRTLLTEEIEPKLEKLRNEKRMFLEFQSTQTDLEKTERIVVSYEYYNIKHKHTSIRETLENGETRMKMLNEFVKKTSEEIDSLNEDVEEIKLQKEKELHKSKLENKENGLLNEISRLKTSLSIKVENLNDTTEKSKALESEIASSSAKLIEKKSAYANTEKDYKMVQEQLSKQRDLYKRKEELVSTLADGGYNAQLAKAKTELNEVSLAIKKSSMKMELLKKELLTIEPKLKEATKDNELNVKHVKQCQETCDKLRARLV |
5 | 6yvuB | 0.10 | 0.10 | 3.59 | 0.67 | CEthreader | | VIDSMLFV--FGFRANKMRQDRLSDLIHKSEAFPSLQSCSVAVHFQYVIDESSGTSRIDEEKPGLIITRKAFKNNSSKYYINEKESSYTEVTKLLKNEGIDLDHKRFLILQGENIAQMKPKAEKESDDGLLEYLEDIIGTANYKPLIEERMGQIENLNEVCLEKENRFEIVDREKNSLGKETALEFLEKEKQLTLLRSKLFQFKLLQSNSKLASTLEKISSSNKDLEDEKMKFQESLKKVDEIKAQRKEIKDRISSCSSKEKTLVLERRELEGTRVSLEERTKNLVSKMEKAEKTLKSTKHSISEAENMLEELRGQQTEHETEIKDLTQLLEKERSILDDIKLSLKDKTKNISAEIIRHEKELEPWDLQLQEKESQIQLAESELSLLEETQAKLKKNVETLEEKILAKKTHKQELQDLILDLKKKL |
6 | 7kogB | 0.05 | 0.05 | 2.46 | 0.95 | EigenThreader | | EQLEEEAEGKADIQRQLSKANAEAQLWRTKYESEGVARAEELEEAKRKLQARLAEAEETIESLNQKVIALEKTKQRLATEVEDLQLEVDRATAIANAAEKKAKAIDKIIGEWKLKVDDLAAELDASQKECRNYSTELFRLKGAYEEAQEQLEAVRRENKNLADEVKDLLDQIGEGGRNIHEIEKQKKRLEVEKDELQAALEEAEAALEQEENKVLRSQLELSQVRQDRRIQEKEEEFENTRKNHQRALDSMQASLEAEAKGKAEALRMKKKLEADINELEIALDHANKANSEAQKTIKKYQQQLKDVQTALEEEQRARDDAREQLGISERRANALQNELEESRTLLEQADRGRRQAEQELGDAHEQINELAAQATSASAAKRKLEGELQTLHADLDELLNEAKNSEEKAKKAMVDAARLADELRAE |
7 | 2tmaA | 0.13 | 0.08 | 2.70 | 1.15 | FFAS-3D | | ------------------------------------------------------------------------------------------------------------------------------------------------------KLDKENALDRAEQAEADKKAAEDRSKQLEDELVSL-QKKLKGTEDELDKYSEA-LKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERS----------------VTKLEKSIDDLEDELYAQKLKYKA |
8 | 6yvuB | 0.08 | 0.08 | 2.98 | 1.32 | SPARKS-K | | LDDVVVDTVECAQHCIDYLRKNKLGYARFILLDRLRQFNLQPISTPENV----PRLFDLVKPKNPKFSNAFYSVLRDTLVAQNL--KQANNVAYGKKRFRVVTVDGKLIDIS----GTMSGGGNHVAKGLMKLKVDDYT-----------PEEVDKIERELSERENNFRVASDTVHEDLESQISKAEMEADSLASELTLAEQQVKEAEMAYVKAVSAQLNVVMKNLERLRGEYNDLQSETKTKKEKIKGLQDEIQMQNSKVESVCQKLDILVAKLKKVKSASKKSGGDVVKFQKLLQNSERDVELSSDELKVIEEQLKHTKLALAENDTNMNETLNLKVELKEQSEQLKEQMEDMEESINEFKSIEIEMKNKLEKLNSLLTYIKSEIAETSCLSEDELRELDVELIESKINELSYYVEETGVLEEY |
9 | 5xg2A | 0.19 | 0.10 | 3.26 | 0.97 | CNFpred | | ------------------------------------------------------------------------------------------------------------------------------------------------------GKRKEKLIEEIRAREEERNALVVRLGEI-DRTFAVAREEFDTVVKELEEARK-SLYEGEARIKRAEEEKERLKAEILTGEARLPGLRERAENLRRLVEEKRAEISELERRLSSI---------------SQSFELRIKLSDLEKELELARKDLEKVLAEERAVREEIEVAKRRINELDTLIERERGELAKLRG---------------------RIERLERKRDKLKKALENPEARELTE-----------KIRAVEKEIAALREELSRVEGKLEG |
10 | 6z9lA | 0.06 | 0.04 | 1.95 | 0.83 | DEthreader | | -EL-G-KG------------------------------------------------DEKNKDVMWDIQHLQKKSVTELLNLSVQSIKFAWDIA--KY-SDTGEYMH---------------DVIAINKA--AKE-GFKEYPNYYENLGGGYLQESIRKVM-SK--LQ-EIANQEKLATAQQAESDAQQARSASQQALNTAKTTQATAEKELSVHKATLANLQAVATKSTTNYEEKVRQTATAEKSLQQTKDQLATINELIQNRAAVLEKAKTNVAEAQAIEQTSAKVLKEKQEAQKAEENTLNSLKEVLDLAKENLNQKQVALKTSTRSLSRLENAQPTYEKA---L-NK-EAAVVQAQEAYENSMKSLEELKEQQAVATLAYAQAQEDLS-NAKLELQQ-------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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