>O60259 (260 residues) MGRPRPRAAKTWMFLLLLGGAWAGHSRAQEDKVLGGHECQPHSQPWQAALFQGQQLLCGG VLVGGNWVLTAAHCKKPKYTVRLGDHSLQNKDGPEQEIPVVQSIPHPCYNSSDVEDHNHD LMLLQLRDQASLGSKVKPISLADHCTQPGQKCTVSGWGTVTSPRENFPDTLNCAEVKIFP QKKCEDAYPGQITDGMVCAGSSKGADTCQGDSGGPLVCDGALQGITSWGSDPCGRSDKPG VYTNICRYLDWIKKIIGSKG |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | MGRPRPRAAKTWMFLLLLGGAWAGHSRAQEDKVLGGHECQPHSQPWQAALFQGQQLLCGGVLVGGNWVLTAAHCKKPKYTVRLGDHSLQNKDGPEQEIPVVQSIPHPCYNSSDVEDHNHDLMLLQLRDQASLGSKVKPISLADHCTQPGQKCTVSGWGTVTSPRENFPDTLNCAEVKIFPQKKCEDAYPGQITDGMVCAGSSKGADTCQGDSGGPLVCDGALQGITSWGSDPCGRSDKPGVYTNICRYLDWIKKIIGSKG |
Prediction | CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCSSCCSSCCCCCCCCSSSSSSCCSSSSSSSSSCCCSSSSCCCCCCCCSSSSSCCCSCCCCCCCSSSSSSSSSSSCCCCCCCCCCCCCCCSSSSSSCCCCCCCCCSSSCSCCCCCCCCCCSSSSSCCCSCCCCCCCCCCCCSSSSSSSCCHHHHHHHCCCCCCCCSSSSCCCCCCSCCCCCCCCCSSSCCSSSSSSSSCCCCCCCCCCCSSSSSHHHHHHHHHHHHHHCC |
Confidence | 99987428999999999986222688888985149865899997529999979918987899239979992120699539998112578899982999866999699999654677897389997488877889843250869999886289997281326899879886669985642899999872999999857644699970878889894227989999996169989999988288653466799999996439 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | MGRPRPRAAKTWMFLLLLGGAWAGHSRAQEDKVLGGHECQPHSQPWQAALFQGQQLLCGGVLVGGNWVLTAAHCKKPKYTVRLGDHSLQNKDGPEQEIPVVQSIPHPCYNSSDVEDHNHDLMLLQLRDQASLGSKVKPISLADHCTQPGQKCTVSGWGTVTSPRENFPDTLNCAEVKIFPQKKCEDAYPGQITDGMVCAGSSKGADTCQGDSGGPLVCDGALQGITSWGSDPCGRSDKPGVYTNICRYLDWIKKIIGSKG |
Prediction | 87434220010000000000020242535551003265054322110002134440011004426300000001347402010011116455644130305400302402453255352330102563505126303201416740545333300041304476454343423060301347414621654036200100266030031241130000433000000233341244521001020041272445316768 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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SS Seq | CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCSSCCSSCCCCCCCCSSSSSSCCSSSSSSSSSCCCSSSSCCCCCCCCSSSSSCCCSCCCCCCCSSSSSSSSSSSCCCCCCCCCCCCCCCSSSSSSCCCCCCCCCSSSCSCCCCCCCCCCSSSSSCCCSCCCCCCCCCCCCSSSSSSSCCHHHHHHHCCCCCCCCSSSSCCCCCCSCCCCCCCCCSSSCCSSSSSSSSCCCCCCCCCCCSSSSSHHHHHHHHHHHHHHCC MGRPRPRAAKTWMFLLLLGGAWAGHSRAQEDKVLGGHECQPHSQPWQAALFQGQQLLCGGVLVGGNWVLTAAHCKKPKYTVRLGDHSLQNKDGPEQEIPVVQSIPHPCYNSSDVEDHNHDLMLLQLRDQASLGSKVKPISLADHCTQPGQKCTVSGWGTVTSPRENFPDTLNCAEVKIFPQKKCEDAYPGQITDGMVCAGSSKGADTCQGDSGGPLVCDGALQGITSWGSDPCGRSDKPGVYTNICRYLDWIKKIIGSKG | |||||||||||||||||||
1 | 2zchP | 0.43 | 0.38 | 11.16 | 1.33 | DEthreader | --------------------------------IVGGWECEKHSQPWQVLVASRGRAVCGGVLVHPQWVLTAAHCIRNKSVILLGRHSLFHPEDTGQVFQVSHSFPHPLYDMSLLDDSSHDLMLLRLSEPAELTDAVKVMDLPTQEPALGTTCYASGWGSIEPEEFLTPKKLQCVDLHVISNDVCAQVHPQKVTKFMLCAGRWGGKSTCSGDSGGPLVCNGVLQGITSWGSEPCALPERPSLYTKVVHYRKWIKDTIVANP | |||||||||||||
2 | 1npmA | 0.74 | 0.64 | 18.10 | 2.67 | SPARKS-K | --------------------------------ILEGRECIPHSQPWQAALFQGERLICGGVLVGDRWVLTAAHCKKQKYSVRLGDHSL--QSQPEQEIQVAQSIQHPCYNNSNPEDHSHDIMLIRLQNSANLGDKVKPVQLANLCPKVGQKCIISGWGTVTSPQENFPNTLNCAEVKIYSQNKCERAYPGKITEGMVCAGSSNGADTCQGDSGGPLVCDGMLQGITSWGSDPCGKPEKPGVYTKICRYTTWIKKTMD--- | |||||||||||||
3 | 2a7jA | 0.36 | 0.31 | 9.28 | 0.66 | MapAlign | --------------------------------VVGGTEAQRNSWPSQISLQYRWAHTCGGTLIRQNWVMTAAHCVELTFRVVVGEHNLNQNDGTEQYVGVQKIVVHPYWNTDDVAA-GYDIALLRLAQSVTLNSYVQLGVLPGTILANNSPCYITGWGLTRT-NGQLAQTLQQAYLPTVDYAICSSYWGSTVKNSMVCAGGDGVRSGCQGDSGGPLHCLYAVHGVTSFVSLGCNVTRKPTVFTRVSAYISWINNVIASN- | |||||||||||||
4 | 2a7jA | 0.36 | 0.31 | 9.17 | 0.36 | CEthreader | --------------------------------VVGGTEAQRNSWPSQISLQYRWAHTCGGTLIRQNWVMTAAHCVDLTFRVVVGEHNLNQNDGTEQYVGVQKIVVHPYWNTDD-VAAGYDIALLRLAQSVTLNSYVQLGVLPGTILANNSPCYITGWGLTRT-NGQLAQTLQQAYLPTVDYAICSSYWGSTVKNSMVCAGGDGVRSGCQGDSGGPLHCLVAVHGVTSFVSLGCNVTRKPTVFTRVSAYISWINNVIASN- | |||||||||||||
5 | 1npmA | 0.75 | 0.64 | 18.20 | 2.20 | MUSTER | --------------------------------ILEGRECIPHSQPWQAALFQGERLICGGVLVGDRWVLTAAHCKKQKYSVRLGDHSLQ--SQPEQEIQVAQSIQHPCYNNSNPEDHSHDIMLIRLQNSANLGDKVKPVQLANLCPKVGQKCIISGWGTVTSPQENFPNTLNCAEVKIYSQNKCERAYPGKITEGMVCAGSSNGADTCQGDSGGPLVCDGMLQGITSWGSDPCGKPEKPGVYTKICRYTTWIKKTMD--- | |||||||||||||
6 | 6esoA | 0.36 | 0.33 | 9.75 | 1.49 | HHsearch | DGSPTRIAY------------GTQGSSGYSLRIVGGTNSSWGEWPWQVSLQVKQRHLCGGSLIGHQWVLTAAHCFDGVWRIYSGILNLSDITKDTPFSQIKEIIIHQNYKVSE---GNHDIALIKLQAPLNYTEFQKPICLPSKGSTIYTNCWVTGWGFSKEK-GEIQNILQKVNIPLVTNEECQKRYQDKITQRMVCA---GGKDACKGDSGGPLVCKHRLVGITSWGE-GCARREQPGVYTKVAEYMDWILEKTQSS- | |||||||||||||
7 | 2zchP | 0.43 | 0.38 | 11.05 | 3.13 | FFAS-3D | --------------------------------IVGGWECEKHSQPWQVLVASRGRAVCGGVLVHPQWVLTAAHCIRNKSVILLGRHSLFHPEDTGQVFQVSHSFPHPLYDLRPGDDSSHDLMLLRLSEPAELTDAVKVMDLPTQEPALGTTCYASGWGSIEPEEFLTPKKLQCVDLHVISNDVCAQVHPQKVTKFMLCAGRTGGKSTCSGDSGGPLVCNGVLQGITSWGSEPCALPERPSLYTKVVHYRKWIKDTIVAN- | |||||||||||||
8 | 1z8gA | 0.31 | 0.30 | 9.06 | 0.92 | EigenThreader | SSRSNARVAGLSCEEMG-------FCGRRKLPIVGGRDTSLGRWPWQVSLRYDGAHLCGGSLLSGDWVLTAAHCFPERWRVFAGAVAQA--SPHGLQLGAVVYHGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPAQALVDGKICTVTGWGNTQY-YGQQAGVLQEARVPIISNDVCNGFYGNQIKPKMFCAGYPGGIDACQGDSGGPFVCEPRWRLIVSWGT-GCALAQKPGVYTKVSDFREWIFQAIKTHS | |||||||||||||
9 | 5ms3A | 1.00 | 0.88 | 24.55 | 4.83 | CNFpred | --------------------------------VLGGHECQPHSQPWQAALFQGQQLLCGGVLVGGNWVLTAAHCKKPKYTVRLGDHSLQNKDGPEQEIPVVQSIPHPCYNSSDVEDHNHDLMLLQLRDQASLGSKVKPISLADHCTQPGQKCTVSGWGTVTSPRENFPDTLNCAEVKIFPQKKCEDAYPGQITDGMVCAGSSKGADTCQGDSGGPLVCDGALQGITSWGSDPCGRSDKPGVYTNICRYLDWIKKIIGSKG | |||||||||||||
10 | 1spjA | 0.46 | 0.40 | 11.68 | 1.33 | DEthreader | --------------------------------IVGGWECEQHSQPWQAALYHFSTFQCGGILVHRQWVLTAAHCISDNYQLWLGRHNLFDDENTAQFVHVSESFPHPGFNMSLQEDYSHDLMLLRLTEPADTTDAVKVVELPTEEPEVGSTCLASGWGSIEPENFSFPDDLQCVDLKILPNDECKKAHVQKVTDFMLCVGHEGGKDTCVGDSGGPLMCDGVLQGVTSWGYVPCGTPNKPSVAVRVLSYVKWIEDTIAENS | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |