Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| SS Seq | CCHHHHHHHHHHHCCCCCCSSSSSCCCCHHHHHHHHHHHHCCCSSSSSSSCCCCCCCSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSSSSCCCCSSSSSCCCCCCCHHHHHHHHHHHHHCCCSSSSSSSCCCCCCHHHHHHHHCCCCSSSSCCCCCCCHHHCCCCCSSSSSHHHHHHHHHHHHHCCCCHHHHHCCCCCCC RASPFLLQYIQEEIPDYRNAVIVAKSPASAKRAQSFAERLRLGIAVIHGEAQDAESDLVDGRHSPPMVRSVAAIHPSLEIPMLIPKEKPPITVVGDVGGRIAIIVDDIIDDVDSFLAAAETLKERGAYKIFVMATHGLLSSDAPRRIEESAIDEVVVTNTIPHEVQKLQCPKIKTVDISMILSEAIRRIHNGESMSYLFRNIGLDD |
1 | 2hcrB | 0.46 | 0.37 | 10.76 | 1.17 | DEthreader | | YAEPAVLKWIRENISEWRNCTIVSPDAGGAKRVTSIADRLNVDFALIHKE------------------------------------D--RMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAGATRVYAILTHGIFSGPAISRINNACFEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAIRRTHNGESVSYLFSHVP--- |
2 | 2hcrB2 | 0.46 | 0.37 | 10.76 | 1.51 | SPARKS-K | | YAEPAVLKWIRENISEWRNCTIVSPDAGGAKRVTSIADRLNVDFALIHKEDR--------------------------------------MVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAGATRVYAILTHGIFSGPAISRINNACFEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAIRRTHNGESVSYLFSHVP--- |
3 | 2hcrB2 | 0.46 | 0.36 | 10.63 | 0.84 | MapAlign | | YAEPAVLKWIRENISEWRNCTIVSPDAGGAKRVTSIADRLNVDFALIHK--------------------------------------EDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAGATRVYAILTHGIFSGPAISRINNACFEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAIRRTHNGESVSYLFSHV---- |
4 | 2hcrB2 | 0.46 | 0.37 | 10.76 | 0.64 | CEthreader | | YAEPAVLKWIRENISEWRNCTIVSPDAGGAKRVTSIADRLNVDFALIHKED--------------------------------------RMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAGATRVYAILTHGIFSGPAISRINNACFEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAIRRTHNGESVSYLFSHVP--- |
5 | 2hcrB2 | 0.46 | 0.37 | 10.76 | 1.68 | MUSTER | | YAEPAVLKWIRENISEWRNCTIVSPDAGGAKRVTSIADRLNVDFALIHKEDR--------------------------------------MVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAGATRVYAILTHGIFSGPAISRINNACFEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAIRRTHNGESVSYLFSHVP--- |
6 | 2hcrB | 0.46 | 0.37 | 10.76 | 2.21 | HHsearch | | YAEPAVLKWIRENISEWRNCTIVSPDAGGAKRVTSIADRLNVDFALIHKED--------------------------------------RMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAGATRVYAILTHGIFSGPAISRINNACFEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAIRRTHNGESVSYLFSHVP--- |
7 | 2hcrB2 | 0.46 | 0.37 | 10.76 | 2.12 | FFAS-3D | | -AEPAVLKWIRENISEWRNCTIVSPDAGGAKRVTSIADRLNVDFALIHKEDR--------------------------------------MVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAGATRVYAILTHGIFSGPAISRINNACFEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAIRRTHNGESVSYLFSHVP--- |
8 | 5t3oA2 | 0.37 | 0.29 | 8.66 | 0.68 | EigenThreader | | SAEPVIANYFATRV-DLENAVVVAPDAGDLKRASALARRLGLPLAFIDK-------------------------------ERVSDTEVRVRMLVGEVEGKTALIVDDEISTAGSLVEAVEALMQAGAKEVYAAATHGVYVGPALDRIAKSPVKEVAATDTCPPK----EGPKLRTLTVAPLFAEAIWRIHRGESV-----SSLFT- |
9 | 2ji4A | 1.00 | 0.80 | 22.29 | 2.06 | CNFpred | | RASPFLLQYIQEEIPDYRNAVIVAKSPASAKRAQSFAERLRLGIAVIH-----------------------------------------PITVVGDVGGRIAIIVDDIIDDVDSFLAAAETLKERGAYKIFVMATHGLLSSDAPRRIEESAIDEVVVTNTIPHEVQKLQCPKIKTVDISMILSEAIRRIHNGESMSYLFRNIGLD- |
10 | 2hcrB2 | 0.46 | 0.37 | 10.76 | 1.17 | DEthreader | | YAEPAVLKWIRENISEWRNCTIVSPDAGGAKRVTSIADRLNVDFALIHKE------------------------------------D--RMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAGATRVYAILTHGIFSGPAISRINNACFEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAIRRTHNGESVSYLFSHVP--- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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