>O60256 (163 residues) MFCVTPPELETKMNITKGGLVLFSANSNSSCMELSKKIAERLGVEMGKVQVYQEPNRETR VQIQESVRGKDVFIIQTVSKDVNTTIMELLIMVYACKTSCAKSIIGVIPYFPYSKQCKMR KRGSIVSKLLASMMCKAGLTHLITMDLHQKEIQGFFNIPVDNL |
Sequence |
20 40 60 80 100 120 140 160 | | | | | | | | MFCVTPPELETKMNITKGGLVLFSANSNSSCMELSKKIAERLGVEMGKVQVYQEPNRETRVQIQESVRGKDVFIIQTVSKDVNTTIMELLIMVYACKTSCAKSIIGVIPYFPYSKQCKMRKRGSIVSKLLASMMCKAGLTHLITMDLHQKEIQGFFNIPVDNL |
Prediction | CCCCCCCCCCCCCCCCCCCSSSSSSCCCCCHHHHHHHHHHHHCCCCSSSSSSSCCCCCSSSSSCCCCCCCSSSSSSCCCCCCCHHHHHHHHHHHHHHHHCCCSSSSSSCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCSSSSSCCCCHHHCCCCCCSCCCC |
Confidence | 9867798776677789998799982699984999999999979973447999749981899857766798299997299986558999999999999936985899943666433456678876039999999998199989997188667748177806889 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 | | | | | | | | MFCVTPPELETKMNITKGGLVLFSANSNSSCMELSKKIAERLGVEMGKVQVYQEPNRETRVQIQESVRGKDVFIIQTVSKDVNTTIMELLIMVYACKTSCAKSIIGVIPYFPYSKQCKMRKRGSIVSKLLASMMCKAGLTHLITMDLHQKEIQGFFNIPVDNL |
Prediction | 7435444626551446543010000112453450043007317152151315425421130305550443200000012433142102112113004424043000000001123334344333221320032134340100000001264036217133637 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 | | | | | | | | | |||||||||||||
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SS Seq | CCCCCCCCCCCCCCCCCCCSSSSSSCCCCCHHHHHHHHHHHHCCCCSSSSSSSCCCCCSSSSSCCCCCCCSSSSSSCCCCCCCHHHHHHHHHHHHHHHHCCCSSSSSSCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCSSSSSCCCCHHHCCCCCCSCCCC MFCVTPPELETKMNITKGGLVLFSANSNSSCMELSKKIAERLGVEMGKVQVYQEPNRETRVQIQESVRGKDVFIIQTVSKDVNTTIMELLIMVYACKTSCAKSIIGVIPYFPYSKQCKMRKRGSIVSKLLASMMCKAGLTHLITMDLHQKEIQGFFNIPVDNL | |||||||||||||||||||
1 | 5t3oA1 | 0.41 | 0.36 | 10.48 | 1.33 | DEthreader | ---------------P---LLIFSGQS---NRPLAQAIAEALGLPLGKSTTLRFANDNLFVRYEESLREGDVFIVQSFVPPVQDHLMELLMMVDAAKGASAARVTAVIPYFSYARSDKKDPRISITARLIADLLQTAGADRVLTMTLHSPQVHGFFKIPVDHL | |||||||||||||
2 | 5t3oA1 | 0.42 | 0.36 | 10.64 | 2.38 | SPARKS-K | ------------------PLLIFSGQSN---RPLAQAIAEALGLPLGKSTTLRFANDNLFVRYEESLREGDVFIVQSFVPPVQDHLMELLMMVDAAKGASAARVTAVIPYFSYARSDKKAPRISITARLIADLLQTAGADRVLTMTLHSPQVHGFFKIPVDHL | |||||||||||||
3 | 4s2uA | 0.41 | 0.36 | 10.48 | 0.84 | MapAlign | -----------------PDMKLFAGNA---TPELAQRIANRLYTSLGDAAVGRFSDGEVSVQINENVRGGDIFIIQSTCAPTNDNLMELVVMVDALRRASAGRITAVIPYFGYARQDRRVARVPITAKVVADFLSSVGVDRVLTVDLHAEQIQGFFDVPVDNV | |||||||||||||
4 | 4s2uA1 | 0.41 | 0.36 | 10.48 | 0.70 | CEthreader | -----------------PDMKLFAGNA---TPELAQRIANRLYTSLGDAAVGRFSDGEVSVQINENVRGGDIFIIQSTCAPTNDNLMELVVMVDALRRASAGRITAVIPYFGYARQDRRVARVPITAKVVADFLSSVGVDRVLTVDLHAEQIQGFFDVPVDNV | |||||||||||||
5 | 2c4kA1 | 0.74 | 0.66 | 18.78 | 2.59 | MUSTER | ------------------GYRVFSANSTAACTELAKRITERLGAELGKSVVYQETNGETRVEIKESVRGQDIFIIQTIPRDVNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKMRKRGSIVCKLLASMLAKAGLTHIITMDLHQKEIQGFFSFPVDNL | |||||||||||||
6 | 1dkrB | 0.46 | 0.42 | 12.18 | 2.75 | HHsearch | -----------SNQYGDKNLKIFSLNS---NPELAKEIADIVGVQLGKCSVTRFSDGEVQINIEESIRGCDCYIIQSTSDPVNEHIMELLIMVDALKRASAKTINIVIPYYGYARQDRKASREPITAKLFANLLETAGATRVIALDLHAPQIQGFFDIPIDHL | |||||||||||||
7 | 2c4kA1 | 0.74 | 0.66 | 18.61 | 2.26 | FFAS-3D | -------------------YRVFSANSTAACTELAKRITERLGAELGKSVVYQETNGETRVEIKESVRGQDIFIIQTIPRDVNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKMRKRGSIVCKLLASMLAKAGLTHIITMDLHQKEIQGFFSFPVDNL | |||||||||||||
8 | 1dkrB | 0.45 | 0.41 | 12.01 | 0.78 | EigenThreader | -----------SNQYGDKNLKIFSLNS---NPELAKEIADIVGVQLGKCSVTRFSDGEVQINIEESIRGCDCYIIQSTSDPVNEHIMELLIMVDALKRASAKTINIVIPYYGYARQDRKARSREITAKLFANLLETAGATRVIALDLHAPQIQGFFDIPIDHL | |||||||||||||
9 | 2c4kA | 0.74 | 0.66 | 18.78 | 1.97 | CNFpred | ------------------GYRVFSANSTAACTELAKRITERLGAELGKSVVYQETNGETRVEIKESVRGQDIFIIQTIPRDVNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKMRKRGSIVCKLLASMLAKAGLTHIITMDLHQKEIQGFFSFPVDNL | |||||||||||||
10 | 5t3oA | 0.40 | 0.35 | 10.31 | 1.33 | DEthreader | ---------------P---LLIFSGQS---NRPLAQAIAEALGLPLGKSTTLRFANDNLFVRYEESLREGDVFIVQSFVPPVQDHLMELLMMVDAAKGASAARVTAVIPYFSYARSDKKDAPISITARLIADLLQTAGADRVLTMTLHSPQVHGFFKIPVDHL | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |