Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520
| | | | | | | | | | | | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC MAVNKGLTLLDGDLPEQENVLQRVLQLPVVSGTCECFQKTYTSTKEAHPLVASVCNAYEKGVQSASSLAAWSMEPVVRRLSTQFTAANELACRGLDHLEEKIPALQYPPEKIASELKDTISTRLRSARNSISVPIASTSDKVLGAALAGCELAWGVARDTAEFAANTRAGRLASGGADLALGSIEKVVEYLLPPDKEESAPAPGHQQAQKSPKAKPSLLSRVGALTNTLSRYTVQTMARALEQGHTVAMWIPGVVPLSSLAQWGASVAMQAVSRRRSEVRVPWLHSLAAAQEEDHEDQTDTEGEDTEEEEELETEENKFSEVAALPGPRGLLGGVAHTLQKTLQTTISAVTWAPAAVLGMAGRVLHLTPAPAVSSTKGRAMSLSDALKGVTDNVVDTVVHYVPLPRLSLMEPESEFRDIDNPPAEVERREAERRASGAPSAGPEPAPRLAQPRRSLRSAQSPGAPPGPGLEDEVATPAAPRPGFPAVPREKPKRRVSDSFFRPSVMEPILGRTHYSQLRKKS |
1 | 1sziA | 0.18 | 0.06 | 1.80 | 1.39 | FFAS-3D | | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NRLPLTEAELALIATPPEDSDQQRQEQNYFVRLGSLSERLRNHAYEHLQNARQKAQETLQQLTSVLGLMESVK-----------------------------------------QAKPEQVEAR--------------ALSMFRDITQQLQSMCVALGASIQGLPSHVREQAQQAFQDLSAGVLAQTRERIARAREAL----DNTVEYVAQNTPAMWL------------------------------------------------------------------------------------------------------------------- |
2 | 6bfiA | 0.08 | 0.05 | 2.00 | 1.08 | CNFpred | | ------------DEDFKAELPPSMQEVQQAAVFLSDAARLLKADQGSPEGKRKLLDGARGVINGMSDLLMCADRSEVRKMVKVCRSVQEYLD-VAKVIDVE-----ADLATFLQNLTPGMTSMMKVVEQRHPELTNLAHAQMLKSELGTVREQIPILISSIRVCCLVSGMKDAAFGRDYVIQKLFIAIEEIIRVLQLTTTFEEE--------ASAASLAHMFHQAQDALASGISRSTLDAVRKCISEGRRVAALAATDETRAKLLAAADELD-----QILKELEELQAKGLGDSRQARA-------------------------AHAAAVKLQELEQEIRKALAERVATDFNVGGPIKALEDAALASP----DPNRQANFAQKAKEFEAHTARLADTAELV------------------------------------------------------------------------------------------------------------------------- |
3 | 1vt4I | 0.06 | 0.06 | 2.62 | 1.50 | MapAlign | | FDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFVQKFVEEVLRINKFLMSPIKMTRMYIEQRDRLYNDNQAKYNVSRLQPYLKLRQALLEVALDVCLSYKVQNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSQNAKAWNATRFKQVTDFLSAAMTLTPDEVKSLLLKYLDCRPQDL----------PREVLTTNPRRLSIIAESIRTTIIESSLNVLPEYRKMFDRSAHIPTILLSLIWVMVVVNKLHLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKN---------IEHPERMTLFRMVFLDFRFLEQKIRILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKAEDEAIFEEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
4 | 1sziA | 0.17 | 0.06 | 1.82 | 6.75 | HHsearch | | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NRLPLTEAELALIATPPEDSDQQRQEQNYFVRLGSLSERLRNHAYEHSLGKLQNAQETLQQLTSVLGLMESVKQA-----------------------------K--------PEQ--------VE----------ARALSMFRDITQQLQSMCVALGASIQGLPSHVREQAQQARSQVSAGVLAQTRERIARARE----ALDNTVEYVAQNTPAMWLVGP-----FAPGI-----TE----------------------------------------------------------------------------------------------- |
5 | 6r9tA | 0.09 | 0.09 | 3.53 | 0.75 | CEthreader | | DAITAGTASVVNGCAVTTISSNLTEMSRGVKLLAALLEDEGGSGRPLLQAAKGLAGAVSELLRSAQP-ASAEPRQNLLQAAGNVGQASGELLQQIGESPHFQDALMQLAKAVASAAAALVLKAKSVAQRTEDSGLQTQVIAAATQCALSTSQLVACTKVVAPTISSPVCQEQLVEAGRLVAKAVEGCVSASQAATEDGATAVTQALNELLQHVKAHATGAGPAGRYDQATDTILTVTENIFSSMGDAGEMVRQARILAQATSDLVNAIKADAEGESDLENSRKLLSAAKILADAHPDSEEQQQRLREAAEGLRMATNAAAQNAIKKKLVQRLEHAAKQAAASATQTIAAAQHAASTPKASAGPQPLLVQCKAVAEQIPLLVQGVRGSQSAQLALIAASQSFLQPGGKMVAAAKASVPTIQDQASAMQLSQCAKNLGTALAELRTAAQKAQEACGPLEMDSALSVVQNLEKDLQEVKAAARDGKLKPLPGETMEKCTQDLGNSTKAVSSAIAQLLGEVAQGNE |
6 | 6gmhQ | 0.07 | 0.07 | 2.74 | 0.90 | EigenThreader | | -GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---GGGGGGGGGGGGGGGGGGGGGGGGGGGGG----GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGESCYQLARSFHVQDQAFQYYYQATQFASSSFVLPFFGLGQMYIYRGSQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYAWIELAQILEQTDIQGALSAYGTATRILQEKVQADEILNNVGALHFRLGNLGEAKKYFLASLDRAKAEAEHDEH---YYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPS |
7 | 5ic0A | 0.08 | 0.06 | 2.42 | 1.05 | FFAS-3D | | ---HMAPGQKE-----CDNALRQLETQPINDSYFGCLDSVMENSKVLGEAMTGISQNAKNGLPEFGDAIATASKALCGFTEAAAQAAYLVGVSDPNSQAQQGLVEPTQFARANQAIQMACQSQVLSAATIVAKHTSALCNSCRLASARTVQSAKEVANSTANLVFTEENRAQCRAATAPLLEAVDNLSAFA--------SNPEFSSVPAQISPEGRAAMEPIVISAKTMLESAGGLIQTARALAVPRWSVLAGHSRTVSDSIKKLITSMRDKAPGQLECETAIAALNSCLRD------------LDQASLAAVSQQLAPREGISQEALHTQMLTAVQEISHLIEPLASAARAEASQLGHKVSQMAQYFEPLTLHPQQMALLDQTKTLAESALQLLYTAKEAGG-------------NPKQAAHTQEALEEAVQMMTEA------------------------------------------------------------------------------------ |
8 | 4iggA | 0.09 | 0.09 | 3.46 | 0.86 | SPARKS-K | | LKVVEDGILKLRNAGNEQDLGIQYKALPEVDKLNIMAAKRQQEHRDQMAAARGILQKNVPILYTASQACLQAYKANRDLIYKQLQQAVTGISNALNNFDKQIIVDPLSEERFRPSLEERLESIISGAALMADSSCTR--DDRRERIVAECNAVRQALQDLLSEYMIDKMTKKTRDLRRQLRKAVMDHVSDSFLETNVPLLVLEAAKNG--NEKEVKEYAQVFREHANKLIEVANLACSEGVKLVRMSASQLEALCPQVINAALALAAKSKLAQENMDLFKEQWEKQVRVLTDAVDDI--------TSIDDFLAVSENHILEDVNKEKDVDGLDRTAGAIRGRAARVIHVVTSETEKVLEATKLLSNTVMPRFTEQVEAAVEALENEFIDASRLVYDGIRDIRKAVLMIRTPGQSARAIAQLPQEQKAKIAEQVASFQEEKSKLDAEVSKWDDSGNDIIVLAKQMCMIMMEMTDFTRGKGPLKNTSDVISAAKKIAEAGSRMDKLGRTIADHCPDSACKQDLL |
9 | 5ic0A | 0.10 | 0.07 | 2.55 | 1.08 | CNFpred | | ------------------GCLDSVMENKVLGEAMTGISQNAKNG--NLPEFGDAIATASKALCGFTEAAAQAAYLVGV-EPTQFARANQAIQMACQSLGEPG----CTQAQVLSAATIVAKALCNSCRLASART----NPTAKRQFVQSAKEVANSTANLVKTIKTEENRAQCRAATAPLLEAVDNLSAFASNPEFSSV-PAQISPEGRAAMEPIVISAKTMLESAGGLIQTARALRWSVLAGHSRTVS--DSIKKLITSMRDKAPGQLECETAI--AALNSCLRDLDQASLAAVSQQLAPREGISQEALHTQMLTA-------VQEISHLIEPLASAARAEASQLGHKVSQMAQYFEPLTLAAVGAASKTLSHPQQMALLDQTKTLAESALQLLYTAKEA------------------------------------------------------------------------------------------------------------------------- |
10 | 6ar6A | 0.06 | 0.03 | 1.36 | 0.50 | DEthreader | | ---------------------------------------------------------------------------------------------NT-IEESLNKITQNSGNDVRMYLDVDNQEMASLWSSYSINVEYISVKSKNLPE-----------------------------------------------------------------------------------ATIIDG-SL--IE---MAVN-TTIITSSLGIASGFSILLVPLAGISAHVVVFMPLIEIDFNNNSI-------------------EELDLSKDLMVRSFIALSLIIDVDNVVRDLIEGILST--------------ILNSHEINFS-FVSLIEVDYKLLPSKVITNILTGSLSNSFIFICIQPILRQNMIVFSQKYLYGIDS-----------ETNNTYPEVIVNINDLSIRYVW---------STSEVSQVKIRFVVALSFNFSDKQ-------FNPINGGAASIGTYYFLQT |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
|