>O43908 (158 residues) MNKQRGTYSEVSLAQDPKRQQRKLKGNKISISGTKQEIFQVELNLQNASSDHQGNDKTYH CKGLLPPPEKLTAEVLGIICIVLMATVLKTIVLIPCIGVLEQNNFSLNRRMQKARHCGHC PEEWITYSNSCYYIGKERRTWEERVCWPVLRRTLICFL |
Sequence |
20 40 60 80 100 120 140 | | | | | | | MNKQRGTYSEVSLAQDPKRQQRKLKGNKISISGTKQEIFQVELNLQNASSDHQGNDKTYHCKGLLPPPEKLTAEVLGIICIVLMATVLKTIVLIPCIGVLEQNNFSLNRRMQKARHCGHCPEEWITYSNSCYYIGKERRTWEERVCWPVLRRTLICFL |
Prediction | CCCCCCSSCCCCCCCCHHHHHCCCCCCCCCCCCCCCSSSSSSSSCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCSSSCCSSSSSSCCCCCHHHHHHHHHHCCCCSSSC |
Confidence | 99765232023468880564202235666642231104555543255430026655555556678864889999999999999999999998753000001345443432334678899997775878989999656558899999999829971659 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 | | | | | | | MNKQRGTYSEVSLAQDPKRQQRKLKGNKISISGTKQEIFQVELNLQNASSDHQGNDKTYHCKGLLPPPEKLTAEVLGIICIVLMATVLKTIVLIPCIGVLEQNNFSLNRRMQKARHCGHCPEEWITYSNSCYYIGKERRTWEERVCWPVLRRTLICFL |
Prediction | 87747132441434764544544656662524444441322414245346735565554525733433322102123331333233343333323334444444444445346444442026412415420000044463165035204647130044 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 | | | | | | | | |||||||||||||
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SS Seq | CCCCCCSSCCCCCCCCHHHHHCCCCCCCCCCCCCCCSSSSSSSSCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCSSSCCSSSSSSCCCCCHHHHHHHHHHCCCCSSSC MNKQRGTYSEVSLAQDPKRQQRKLKGNKISISGTKQEIFQVELNLQNASSDHQGNDKTYHCKGLLPPPEKLTAEVLGIICIVLMATVLKTIVLIPCIGVLEQNNFSLNRRMQKARHCGHCPEEWITYSNSCYYIGKERRTWEERVCWPVLRRTLICFL | |||||||||||||||||||
1 | 6w1sD | 0.08 | 0.08 | 2.99 | 1.09 | SPARKS-K | PMQYIKEYTDENIQEGLAPKPPPPIKDSYMMFGNQFQCD----DLIIRPLESQGIERLHPMQFDHKKELRKLNMSILINFLDLLDILIRREEKLEDLKLLFVHVHHLINEYRPHQARETLRVMMEVQKRQRLETAERFQKHLERVIEMIQNC------ | |||||||||||||
2 | 3cdgJ | 0.29 | 0.08 | 2.32 | 1.66 | HHsearch | -------------------------------------------------------------------------------------------------------------------DCCSCQEKWVGYRCNCYFISSEQKTWNESR-HLCASQKSSLLQ | |||||||||||||
3 | 3wp8A | 0.04 | 0.04 | 2.20 | 0.75 | CEthreader | YHIENEIARIKKLIAVITSNITEVVDGNGNKVNIIDQVVNTKPDNKNQDSLFLTYDKQGQETTDRLTIGQTVQKMNTDGIKFFHTNADTSKGDLGTTNDSSAGGLNGADSSVALGHNTKVNGKQSIAIGSGAEALGNQSISIGTGNKVTGDHSGAIGD | |||||||||||||
4 | 6ianA | 0.06 | 0.06 | 2.48 | 0.67 | EigenThreader | EEQNLDRRILAENQDFGLYKATRDEAFNVSDAVLSHQHQIRLLSTDPDKKRAAEVLRGILSKRQLKEELTKQCAEEERQLLIKQVKTARGDIEVLERQVNETRDALSESKNRCASLDEELKSYSG---------DNIKAFQELQEKDRELQSFDSFPA | |||||||||||||
5 | 3j82A | 0.24 | 0.06 | 1.97 | 0.78 | FFAS-3D | --------------------------------------------------------------------------------------------------------------------CSPCPHNWIQNGKSCYYVFERWEMWNISKKSCLKEGASLFQI | |||||||||||||
6 | 6n7pX | 0.06 | 0.06 | 2.47 | 1.00 | SPARKS-K | LTPQTGDEGFNDALTLPSVDDL-KSFVRLNKNFGSVDSMWKTPRYAFHVYLPNSAGNFETVVPISTYAGQLFNDIIIDLVESLEFNRKEVARQVITLDLFFKAGIFTEPGESIAQLIATYEENP----------LAPTFKIEDLAIETILGLIFKLPS | |||||||||||||
7 | 3bdwB | 0.66 | 0.18 | 5.23 | 0.63 | CNFpred | -----------------------------------------------------------------------------------------------------------------ARHCGHCPEEWITYSNSCYYIGKERRTWE-ESLLACTSKNSSLLS | |||||||||||||
8 | 6tedQ | 0.05 | 0.04 | 1.78 | 1.00 | DEthreader | CQYYYLMYDKEYAASEEQT---KNLVTADVWLAAMYCVVLACKVLLAEAQCSDLLSQAQYHVRKQEEERELRAKQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQRAQYVEKTKNI---------LMFT--------------------------- | |||||||||||||
9 | 2cf2C | 0.05 | 0.05 | 2.37 | 0.92 | MapAlign | GRGELFGAKGPQLPAPNMLMMDRVVKMTETGGNFDKGYVEAELDINPDLWFFGCHFIGDPVMPGCLGLDAMWQLVGFYLGWRESYTKEDLLASGRGELFGAKGPQLPAPNMLMMDRVVKMDKGYVEAELYRIHFKRIVNIMGLADGEVLVDGRLIYTA | |||||||||||||
10 | 3k1qD1 | 0.06 | 0.05 | 2.27 | 0.64 | MUSTER | ------------MAQRQFFGLTYNFYGQPAPLFDLNDLQELAGCYARPWTSRFSSTGSLPVWSARYPSVASRNIVVNTLLGAHLNPFAGGQITSHQGITWRDPVLSPVPAIQPPPVWAVAENVLLSNNYPTYVLNLSSM-WPINQDVHIMTMWALS-- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |