Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360
| | | | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCSSSSHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSHHHCCCC MELELDAGDQDLLAFLLEESGDLGTAPDEAVRAPLDWALPLSEVPSDWEVDDLLCSLLSPPASLNILSSSNPCLVHHDHTYSLPRETVSMDLESESCRKEGTQMTPQHMEELAEQEIARLVLTDEEKSLLEKEGLILPETLPLTKTEEQILKRVRRKIRNKRSAQESRRKKKVYVGGLESRVLKYTAQNMELQNKVQLLEEQNLSLLDQLRKLQAMVIEISNKTSSSSTCILVLLVSFCLLLVPAMYSSDTRGSLPAEHGVLSRQLRALPSEDPYQLELPALQSEVPKDSTHQWLDGSDCVLQAPGNTSCLLHYMPQAPSAEPPLEWPFPDLFSEPLCRGPILPLQANLTRKGGWLPTGSPSVILQDRYSG |
1 | 1vt4I | 0.08 | 0.08 | 3.04 | 1.68 | MapAlign | | LLVLLNVQNAKAWNAFTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLPSAHIPTILLSLQPKESTISIPSIPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKALMAEDEAIFEEAHKQVQGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
2 | 6iakA | 0.72 | 0.13 | 3.75 | 2.20 | HHsearch | | ----------------------------------------------------------------------------------------------------------------------------------------------------RLLKKVRRKIRNKQSAQDSRRRKKIYVDGLENRVAACTAQNHELQKKVQLLQKQNMSLLEQLRKLQAL----------------------------------------------------------------------------------------------------------------------------------------------------------- |
3 | 1vt4I | 0.04 | 0.04 | 2.16 | 0.82 | CEthreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
4 | 4cr2Z | 0.06 | 0.06 | 2.59 | 0.68 | EigenThreader | | PEDVAFLKTAYSIYLSQNELTDAIALAVRLGEEDMIRSVFDATSDPVMHKQLAYILAAQKTSFEYEGVQDIIGNGKLSEHFLYLAKELNLTGPKNSKSVFSSLGYCNDKLIVDNGMTSAVASIGSIYQGLQQLDKYLYVDEPEVKAGALLGIGISASSAAILGLGIAFAAMASLALAHVFDITTSIMDNFLERDWVRFLALALGILYMTSAIEVLVGSCAYTGTGDVLLIQDLLHRLTYAVLGIALIALGEDIGKEMSLRHFGHLMHYGNEHIRRMVPLAMGIVSVSDPQFSHDADLEVSMNSIFAMGLCGAGTNNARLAQLLRQLASYYSREQDALFITRLAQGLLHLGKGTMTMDVFNDA----HVLNK |
5 | 2wt7B | 0.29 | 0.07 | 2.05 | 0.68 | FFAS-3D | | ---------------------------------------------------------------------------------------------------------------------------DQLVSMSVRE---LNRHLRFTKDEVIRLKQKRRTLKNRGYAQSCRYKRVQQKHHLENEKTQLIQQVEQLKQEVSRLARERDAYKVKSEKL-------------------------------------------------------------------------------------------------------------------------------------------------------------- |
6 | 4btgA | 0.12 | 0.12 | 4.16 | 0.76 | SPARKS-K | | NGSARGLTQAFAIGEL-KNQLSVGALQLPLQFTRTFSASMTSELLWEVGARLFFQYAQAGGALSHQSTACNPEIWRKLTAYITGSSN-----RAIKADAVGKVPPTAILEQLRTLAPSEHELTDFVCHVLSPLGFILPDAATYPNF-YALVDCVRASDLRRMLTALSSVDSKMLQATFKAKGALAPAISQHLANAATTAFERNAVVSSVLTILGRLWSPSTPKELDPSRSNLALFIAYQDMVKQRRAEVIFSDEE------LSSTI--IPWFIEAMSEVSPFKLRPINETTSYAIDHMGQPSHVVVYEDWQFAKPVKLANNSNQRFLDVEPGISDRMSATLAPIGNTFAVSQRGTVNSNGAEMTLGFPSVV |
7 | 6f1tx | 0.17 | 0.05 | 1.51 | 0.51 | CNFpred | | -------------------------------------------------------------------------------------------------------------DREKTRAVQEL--SEQNQRLLDQL--------RASEVERQLSMQVHALKEDFREKNSSTNQHIIRLESLQAEIKMLSDRKRELEHRLSATLEENDLLQGTVEELQDRVLILER----------------------------------------------------------------------------------------------------------------------------------------------------- |
8 | 1nneA | 0.06 | 0.04 | 1.58 | 0.67 | DEthreader | | ------------------YVELRDQYP-----FGE-AETHKTPMAGIPLAFAYAERLLKMGFPP-AFETFSDETRTGLLDLERLLASPKPLIRERHRGVAFLVGYNFGYYTMKEKERE-V--------------------YRLEA-LI-RRREEEVFLEVRERAKRQAE-A-LRE--AARILA-ELDVYAALAEVAVRYGYV------------------------------------EFVP--GPNMAGK----IGAVEEEVALILKEATEN----SL-VL-LDEVGRGTSSLDGVA-ATA----------LH----------RRAYTLFALLGLPRLKN-LH--VA--A------GLVFYHQVLPG--- |
9 | 5lfcA | 0.06 | 0.06 | 2.48 | 1.53 | MapAlign | | -TQYFGPDGAQVKGAFQQVNKNIYFDAQTGYARQNVGFLDGTAKGFDIKSGIATDLSGNVYYFDASGKMLTGVQNIDGKKYYFDEQGHRRRNYAGVFNNEFIYFGLDGVGQLMTWWPDKEVQANYLNYMSLGLGDQKIYTGASSQLDLNNAALIVQEAIDVWYNQQVNGNSQLTMDATMQNQLLASSEVQTIIAKIISDKAKDSALYDEAFTEYNADMQKISSQKQYTTDEDLRNAIKSLHASNTGFIVDDIGVKYYSISGYQAKNTFVEDGNGEWYYFDNDGYMVKSTGPLRTVNASSKKYYILPNGVEIRNSFGQDIQGNTYY-----------FDARGEMVTSQYISDDTQNIYYFNNDGTM------ |
10 | 5yz0C | 0.18 | 0.16 | 5.11 | 0.58 | MUSTER | | MAGTSAPGSKRRSEPPAPRPGPPPGTFSAAAAPDPDDPFGAHGDFTADDLEDTLASQ--------ALSQCPAAARDVSSDHKVHRLLDGMSKNPSGKNRETVPIKDNFELEVLQAQYKELKMKVMEEEVLIKNGEIKILRDSLHQTESVLEEQRRHFLLEQEKTQALSDKEKEFLQSLQSELQFKDAEMNELRTKLQTSERANK--LAAPSVSHVSPRKNPSVVIKPEAC----SPQFGKTSFPTKESFSLPHPCQTESGYKPLVGRED-SKPHSLRGDSIKQEEAQKSFVDSWRQRSNTQGSI-----NLLLKQPLIPGSSSSSESPAGTPLQPPGFGSTLAGMSGLRT--------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
|