| >O43861 (1147 residues) MADQIPLYPVRSAAAAAANRKRAAYYSAAGPRPGADRHSRYQLEDESAHLDEMPLMMSEE GFENEESDYHTLPRARIMQRKRGLEWFVCDGWKFLCTSCCGWLINICRRKKELKARTVWL GCPEKCEEKHPRNSIKNQKYNVFTFIPGVLYEQFKFFLNLYFLVISCSQFVPALKIGYLY TYWAPLGFVLAVTMTREAIDEFRRFQRDKEVNSQLYSKLTVRGKVQVKSSDIQVGDLIIV EKNQRIPSDMVFLRTSEKAGSCFIRTDQLDGETDWKLKVAVSCTQQLPALGDLFSISAYV YAQKPQMDIHSFEGTFTREDSDPPIHESLSIENTLWASTIVASGTVIGVVIYTGKETRSV MNTSNPKNKVGLLDLELNRLTKALFLALVALSIVMVTLQGFVGPWYRNLFRFLLLFSYII PISLRVNLDMGKAVYGWMMMKDENIPGTVVRTSTIPEELGRLVYLLTDKTGTLTQNEMIF KRLHLGTVSYGADTMDEIQSHVRDSYSQMQSQAGGNNTGSTPLRKAQSSAPKVRKSVSSR IHEAVKAIVLCHNVTPVYESRAGVTEETEFAEADQDFSDENRTYQASSPDEVALVQWTES VGLTLVSRDLTSMQLKTPSGQVLSFCILQLFPFTSESKRMGVIVRDESTAEITFYMKGAD VAMSPIVQYNDWLEEECGNMAREGLRTLVVAKKALTEEQYQDFESRYTQAKLSMHDRSLK VAAVVESLEREMELLCLTGVEDQLQADVRPTLEMLRNAGIKIWMLTGDKLETATCIAKSS HLVSRTQDIHIFRQVTSRGEAHLELNAFRRKHDCALVISGDSLEVCLKYYEHEFVELACQ CPAVVCCRCSPTQKARIVTLLQQHTGRRTCAIGDGGNDVSMIQAADCGIGIEGKEGKQAS LAADFSITQFRHIGRLLMVHGRNSYKRSAALGQFVMHRGLIISTMQAVFSSVFYFASVPL YQGFLMVGYATIYTMFPVFSLVLDQDVKPEMAMLYPELYKDLTKGRSLSFKTFLIWVLIS IYQGGILMYGALVLFESEFVHVVAISFTALILTELLMVALTVRTWHWLMVVAEFLSLGCY VSSLAFLNEYFGIGRVSFGAFLDVAFITTVTFLWKVSAITVVSCLPLYVLKYLRRKLSPP SYCKLAS |
| Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600 620 640 660 680 700 720 740 760 780 800 820 840 860 880 900 920 940 960 980 1000 1020 1040 1060 1080 1100 1120 1140 | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | MADQIPLYPVRSAAAAAANRKRAAYYSAAGPRPGADRHSRYQLEDESAHLDEMPLMMSEEGFENEESDYHTLPRARIMQRKRGLEWFVCDGWKFLCTSCCGWLINICRRKKELKARTVWLGCPEKCEEKHPRNSIKNQKYNVFTFIPGVLYEQFKFFLNLYFLVISCSQFVPALKIGYLYTYWAPLGFVLAVTMTREAIDEFRRFQRDKEVNSQLYSKLTVRGKVQVKSSDIQVGDLIIVEKNQRIPSDMVFLRTSEKAGSCFIRTDQLDGETDWKLKVAVSCTQQLPALGDLFSISAYVYAQKPQMDIHSFEGTFTREDSDPPIHESLSIENTLWASTIVASGTVIGVVIYTGKETRSVMNTSNPKNKVGLLDLELNRLTKALFLALVALSIVMVTLQGFVGPWYRNLFRFLLLFSYIIPISLRVNLDMGKAVYGWMMMKDENIPGTVVRTSTIPEELGRLVYLLTDKTGTLTQNEMIFKRLHLGTVSYGADTMDEIQSHVRDSYSQMQSQAGGNNTGSTPLRKAQSSAPKVRKSVSSRIHEAVKAIVLCHNVTPVYESRAGVTEETEFAEADQDFSDENRTYQASSPDEVALVQWTESVGLTLVSRDLTSMQLKTPSGQVLSFCILQLFPFTSESKRMGVIVRDESTAEITFYMKGADVAMSPIVQYNDWLEEECGNMAREGLRTLVVAKKALTEEQYQDFESRYTQAKLSMHDRSLKVAAVVESLEREMELLCLTGVEDQLQADVRPTLEMLRNAGIKIWMLTGDKLETATCIAKSSHLVSRTQDIHIFRQVTSRGEAHLELNAFRRKHDCALVISGDSLEVCLKYYEHEFVELACQCPAVVCCRCSPTQKARIVTLLQQHTGRRTCAIGDGGNDVSMIQAADCGIGIEGKEGKQASLAADFSITQFRHIGRLLMVHGRNSYKRSAALGQFVMHRGLIISTMQAVFSSVFYFASVPLYQGFLMVGYATIYTMFPVFSLVLDQDVKPEMAMLYPELYKDLTKGRSLSFKTFLIWVLISIYQGGILMYGALVLFESEFVHVVAISFTALILTELLMVALTVRTWHWLMVVAEFLSLGCYVSSLAFLNEYFGIGRVSFGAFLDVAFITTVTFLWKVSAITVVSCLPLYVLKYLRRKLSPPSYCKLAS |
| Prediction | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCSSSCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCSSSSSSSSCCCCCSSSSCCCCSSCCSSSSSSSCCCCCCSSSSCCCCCCCCCCSSCCCCHHHHCCCCHHHHHHCSSSSSSCCCCCCCCSSSSSSSSCCCCCCCCCCCCCCHSHSCCSSSSCCSSSSSSSSSCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHSHHHHHHHHHHHHHHHHCCCCCCSSCCCCHHHHHCCSSSSSCCCCCCCCCCCSSSSSSSSCCSSSCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCSSSCCCCCCHHHHHHHHHHHCCSSSSCCCCSSSSSSCCCCSSSSSSSSSSCCCCCCCCSSSSSSCCCCCSSSSSSCCCCCHHHHHHCHHHHHHHHHHHHHHHCCCSSSSSSSSCCHHHHHHHHHHHHHHHHCHHCHHHHHHHHHHHHHCCCSSSSSSSSSCCCCCCHHHHHHHHHHHCCSSSSSCCCCHHHHHHHHHHCCCCCCCCSSSSSSCCCCHHHHHHHHHHHHCCCCCSSSSCHHHHHHHHHHHHHHHHHHHHCCCCSSSSCCCHHHHHHHHHHHHHHCCCSSSSSCCCCCCHHHHHHCHHCCCCCCCCHHHHHHHCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCHHHHCC |
| Confidence | 9988888877777664445677777887778888777766666677888776787778888776655544577764211123554445553123443213565521014677898289769961456218998446766551568999999999999999999999999855424664058998877723456667899999999998997214321225763146532414578199983896514449999715898826996046887666411135345420699776753438999726887753245799981577666777531001101247742669999999322356677569999775479999999999999999988667555314555148899999999998753100114899999999998630146751313574157717614996177786444630679999998752355542011111134556654334555666630110123432244430578888877653113311233202421001233345667777514316896576999999993978651378817998368822578999996168877630589970899869999848850233310026899999999998527157999986899999999999999872121589999989999970877999999740455236999999999199999977995899999999807778997499995257658899998764202331123137899999777499999999509939998489699999999999854958999527753236777510034114651589997312012103788999999989999999999999999999999999999999846753278999999999999787889876347888999874815445431265335999999999999999999999999845874131235768999999999999974337999999999999999999999886311335514766788760389997999999999999999999866039980665169 |
| H:Helix; S:Strand; C:Coil | |
| Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600 620 640 660 680 700 720 740 760 780 800 820 840 860 880 900 920 940 960 980 1000 1020 1040 1060 1080 1100 1120 1140 | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | MADQIPLYPVRSAAAAAANRKRAAYYSAAGPRPGADRHSRYQLEDESAHLDEMPLMMSEEGFENEESDYHTLPRARIMQRKRGLEWFVCDGWKFLCTSCCGWLINICRRKKELKARTVWLGCPEKCEEKHPRNSIKNQKYNVFTFIPGVLYEQFKFFLNLYFLVISCSQFVPALKIGYLYTYWAPLGFVLAVTMTREAIDEFRRFQRDKEVNSQLYSKLTVRGKVQVKSSDIQVGDLIIVEKNQRIPSDMVFLRTSEKAGSCFIRTDQLDGETDWKLKVAVSCTQQLPALGDLFSISAYVYAQKPQMDIHSFEGTFTREDSDPPIHESLSIENTLWASTIVASGTVIGVVIYTGKETRSVMNTSNPKNKVGLLDLELNRLTKALFLALVALSIVMVTLQGFVGPWYRNLFRFLLLFSYIIPISLRVNLDMGKAVYGWMMMKDENIPGTVVRTSTIPEELGRLVYLLTDKTGTLTQNEMIFKRLHLGTVSYGADTMDEIQSHVRDSYSQMQSQAGGNNTGSTPLRKAQSSAPKVRKSVSSRIHEAVKAIVLCHNVTPVYESRAGVTEETEFAEADQDFSDENRTYQASSPDEVALVQWTESVGLTLVSRDLTSMQLKTPSGQVLSFCILQLFPFTSESKRMGVIVRDESTAEITFYMKGADVAMSPIVQYNDWLEEECGNMAREGLRTLVVAKKALTEEQYQDFESRYTQAKLSMHDRSLKVAAVVESLEREMELLCLTGVEDQLQADVRPTLEMLRNAGIKIWMLTGDKLETATCIAKSSHLVSRTQDIHIFRQVTSRGEAHLELNAFRRKHDCALVISGDSLEVCLKYYEHEFVELACQCPAVVCCRCSPTQKARIVTLLQQHTGRRTCAIGDGGNDVSMIQAADCGIGIEGKEGKQASLAADFSITQFRHIGRLLMVHGRNSYKRSAALGQFVMHRGLIISTMQAVFSSVFYFASVPLYQGFLMVGYATIYTMFPVFSLVLDQDVKPEMAMLYPELYKDLTKGRSLSFKTFLIWVLISIYQGGILMYGALVLFESEFVHVVAISFTALILTELLMVALTVRTWHWLMVVAEFLSLGCYVSSLAFLNEYFGIGRVSFGAFLDVAFITTVTFLWKVSAITVVSCLPLYVLKYLRRKLSPPSYCKLAS |
| Prediction |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|
| Values range from 0 (buried residue) to 8 (highly exposed residue) | |
| Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600 620 640 660 680 700 720 740 760 780 800 820 840 860 880 900 920 940 960 980 1000 1020 1040 1060 1080 1100 1120 1140 | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCSSSCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCSSSSSSSSCCCCCSSSSCCCCSSCCSSSSSSSCCCCCCSSSSCCCCCCCCCCSSCCCCHHHHCCCCHHHHHHCSSSSSSCCCCCCCCSSSSSSSSCCCCCCCCCCCCCCHSHSCCSSSSCCSSSSSSSSSCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHSHHHHHHHHHHHHHHHHCCCCCCSSCCCCHHHHHCCSSSSSCCCCCCCCCCCSSSSSSSSCCSSSCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCSSSCCCCCCHHHHHHHHHHHCCSSSSCCCCSSSSSSCCCCSSSSSSSSSSCCCCCCCCSSSSSSCCCCCSSSSSSCCCCCHHHHHHCHHHHHHHHHHHHHHHCCCSSSSSSSSCCHHHHHHHHHHHHHHHHCHHCHHHHHHHHHHHHHCCCSSSSSSSSSCCCCCCHHHHHHHHHHHCCSSSSSCCCCHHHHHHHHHHCCCCCCCCSSSSSSCCCCHHHHHHHHHHHHCCCCCSSSSCHHHHHHHHHHHHHHHHHHHHCCCCSSSSCCCHHHHHHHHHHHHHHCCCSSSSSCCCCCCHHHHHHCHHCCCCCCCCHHHHHHHCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCHHHHCC MADQIPLYPVRSAAAAAANRKRAAYYSAAGPRPGADRHSRYQLEDESAHLDEMPLMMSEEGFENEESDYHTLPRARIMQRKRGLEWFVCDGWKFLCTSCCGWLINICRRKKELKARTVWLGCPEKCEEKHPRNSIKNQKYNVFTFIPGVLYEQFKFFLNLYFLVISCSQFVPALKIGYLYTYWAPLGFVLAVTMTREAIDEFRRFQRDKEVNSQLYSKLTVRGKVQVKSSDIQVGDLIIVEKNQRIPSDMVFLRTSEKAGSCFIRTDQLDGETDWKLKVAVSCTQQLPALGDLFSISAYVYAQKPQMDIHSFEGTFTREDSDPPIHESLSIENTLWASTIVASGTVIGVVIYTGKETRSVMNTSNPKNKVGLLDLELNRLTKALFLALVALSIVMVTLQGFVGPWYRNLFRFLLLFSYIIPISLRVNLDMGKAVYGWMMMKDENIPGTVVRTSTIPEELGRLVYLLTDKTGTLTQNEMIFKRLHLGTVSYGADTMDEIQSHVRDSYSQMQSQAGGNNTGSTPLRKAQSSAPKVRKSVSSRIHEAVKAIVLCHNVTPVYESRAGVTEETEFAEADQDFSDENRTYQASSPDEVALVQWTESVGLTLVSRDLTSMQLKTPSGQVLSFCILQLFPFTSESKRMGVIVRDESTAEITFYMKGADVAMSPIVQYNDWLEEECGNMAREGLRTLVVAKKALTEEQYQDFESRYTQAKLSMHDRSLKVAAVVESLEREMELLCLTGVEDQLQADVRPTLEMLRNAGIKIWMLTGDKLETATCIAKSSHLVSRTQDIHIFRQVTSRGEAHLELNAFRRKHDCALVISGDSLEVCLKYYEHEFVELACQCPAVVCCRCSPTQKARIVTLLQQHTGRRTCAIGDGGNDVSMIQAADCGIGIEGKEGKQASLAADFSITQFRHIGRLLMVHGRNSYKRSAALGQFVMHRGLIISTMQAVFSSVFYFASVPLYQGFLMVGYATIYTMFPVFSLVLDQDVKPEMAMLYPELYKDLTKGRSLSFKTFLIWVLISIYQGGILMYGALVLFESEFVHVVAISFTALILTELLMVALTVRTWHWLMVVAEFLSLGCYVSSLAFLNEYFGIGRVSFGAFLDVAFITTVTFLWKVSAITVVSCLPLYVLKYLRRKLSPPSYCKLAS | |||||||||||||||||||
| 1 | 6lcpA | 0.22 | 0.17 | 5.48 | 1.17 | DEthreader | -----------------------------------------------------------------------------------------------------------------------------YFNLPPQQFPRNKIRTAKYTFIKNLWFQFHNIANIFFLFLVILVIFPIFGGVNPGLNSVPLIVIITVTAIKDAIEDYRRTILDIELNNAPVHRLKARFHKDAWKNLVVGDFVRIYNDDELPADIIILATSDPD-GACYVETKNLD-G-ETNLKVRQ-AL-RCG-RTLKHARDCAFVIESEPQNLYKYNGAIRWKEPREMSE-PIGIDNLLLRGCHLRNTEWALGVVVFTHDTKIMMNAGITPSKRARIARELNFNVICNFGILLIMCLIAAIANGIAWTGFITFWAAVIVFQNLVPISLYISLEIVRTLQAFFIYSDVGMYPCIPKSWNISDDVGQIEYIFSDKTGTLTQNVMEFKKATINGQPYGEKAILMTFIAPDF--EDLAG----P--E----QQQATEHFMLA--LA-LCH-TVV----------AE-KQPGDP--------P-------KMIFK--AQSPDEAALVATAR-------------LGMSDGGI-------------------------VLSIIEFNSSRKRMKGADSVIYSRLTAHLEMFAVEGLRTLCIA-RREHDLAATAL-EN-----------------REEKLEEVADIEGGTAIEDRLQDGVPDTIALLADAGIKLWVLTGDKVETAINIGFSCNLLNNDMDLLRLQVNESDLEQLKTNLERFNMSPYALVIDGFTLRWVLSDLKQKFLLLCKQCKSVLCCRVSPAQKAAVVSMVKNGLDVMTLSIGDGANDVAMIQEADVGVGIAGEEGRQAVMSSDFAIGQFRFLQRLVLVHGRWSYRRLAETISNFFYKNMIWTWSIFWYQCYCNFDIAYIFEYTYILMFNLFFTSVPVILMGVLDQDSDTVSLAVPQLYRRGIERKEWTQTKFWLYMIDGVYQSVMSFFIPFIVVVSERTRLGAYIAHPAVITINGYILINTYRWDWLMLLSIVLSDVFIFFWTGVYTATTYSA------GFYQAAPQVYQELTFWMCLIVTPALCLLPRLVVKCIQFPYDVDIIRE | |||||||||||||
| 2 | 6lcpA | 0.20 | 0.17 | 5.35 | 1.55 | EigenThreader | ----------------------------------APRKLYFNLPPELKDEEGHPIQQFPRNKIRTAKYTPLSFIPKNLWFQFHNIANIFFLFLVILV---------------------------IFPIFGGVNP----------------------------------------GLNSVPLIVIITVTAIKDAIEDYRRTILDIELNN------APVHRLSGKARKDAWKNLVVGDFVRIYNDDELPADIIILATSDPDGACYVETKNLDGETNLKVRQALRCGRTLKHA-------------RDCERAQFVIESAIRWKEPREMSEPIGIDNLLLRGCHLRTEWALGVVVFTGH-------DTKIMMNAGINFNVICNFGILLIMCLIAAIANGIAWGKTDASLAWFEALTGFITFWAAVIVFLYISLEIVRTLQAFFIYSDVGMYYEKISWNISDDVGQIEYIFSDKTGT-----LEFKKATINGQPYGEAYTEIAAAKVRAIRGLRELHDNPYLHDEDM-----TFIALAGKNGPEQQQATEHFMLAL--------ALCHTVVAEKQ----PGDPPKMI-FKAQSPDEAALVATARDMGFTVLGMGGINVNVM----GKDMHFPVLSIIEFNSRKRMSTIVRMPDGRILLFCKGA----DSVIYSRLRETAQHLEMFAVEGLRTLCIAERELSEEEYREWRREHDLAATALENREEKLEEVA-----DKIGTAIEDRLQ---DGVPDTIALLADAGIKLWVLTGDKVETAINIGFSCNLLNNDM-DLLRLQVNESDAEQLKTNLERFNMTGALVIDGFTLRWVLSDSLKQKFLLLCKQCKSVLCCVSPAQKAAVVSMVKNGLDVMTLSIGDGANDVAMIQEADVGVGIAVMSS-------DFAIGQFRFLQRLVLVHGRWSYRRLAETISNFFYKNMIWTWSIFWYQCYFNLFFTSVPVILMGVL---------------DQDVSDTVSLAVPQLYRRGIERKEWTKFWLYMIDGVYQSVMSFFIPFIFVVLVSERTRLGAYIAHPAVITINGYILINTYRWDWLMLLSIVLSDVFIFFWTGVYT---ATTYSAGFYQAAPQVYQELTFWMCLIVTPALCLLPRLVVKCIQKQRFPYDVDIIRE | |||||||||||||
| 3 | 7ky5A | 0.27 | 0.24 | 7.27 | 4.71 | SPARKS-K | -------------------------------------------------------------------------------------------------------------NRSDELRTVYYNLPLPPLAVYPRNKIRTTKYTPLTFFPKNILFQFHNFANIYFLILLILGAFQIFGVTNPGFASVPLIVIVIITAIKDGIEDSRRTVLDLEVNNTRTHILSGCRFAKDYWKNVKVGDIVRVHNNDEIPADMILLSTSDVDGACYVETKNLDGETNLKVRQSLKCSKIIKSSRDITRTKFWVESEGPHANLYSYQGNWQDTQNGNIRNEPVNINNLLLRGCTLRNTWAMGMVIFTGDDTKIMINAGVTPTKKSRISRELNFSVILNFVLLFILCFTAGIVNGVYYNGFVSFWVAVILYQSLVPISLYISVEIIKTAQAIFIYTDVLLYPCTPKSWNISDDLGQIEYIFSDKTGTLTQNVMEFKKCTINGVSYGRAYEKEEIAKDRETMIDELRSMSDNTQFCPSKEIVEDLKGSSGDHQQKCCEHFLLALALCHSVLVEPNKD----------------DPKKLDIKAQSPDESALVSTARQLGYSFVGSSKSGLIVEIQ-GVQKEFQVLNVLEFNSSRKRMSCIIKIPGEPKALLICKGADSVIYSRLTLLEKTALHLEEYATEGLRTLCLAQRELTWSEYERWVKTYDVAAASVTNREEELDKVTDVIERELILLGGTAIEDRLQDGVPDSIALLAEAGIKLWVLTGDKVETAINIGFSCNVLNNDMELLVVKASGPIQVVNNLVTKYLREGNFAVIIDGDALKVALNGMRRKFLLLCKNCKAVLCCRVSPAQKAAVVKLVKKTLDVMTLAIGDGSNDVAMIQSADVGVGIAGEEGRQAVMCSDYAIGQFRYVTRLVLVHGKWCYKRLAEMIPQFFYKNVIFTLSLFWYGIYNNFDGSYLFEYTYLTFYNLAFTSVPVILLAVDQDVSDTVSMLVPQLYRVGILRKEWNQTKFLWYMLDGVYQSVICFFFPYLAYHDHRYFVGVFVTAIAVTSCNFYVFMEQYRWDWFCGLFICLSLAVFYGWTGIWTS---SSSSNEFYKGAARVFAQPAYWAVLFVGVLFCLLPRFTIDCIRKIFYPKDIEIVRE | |||||||||||||
| 4 | 6lcpA | 0.27 | 0.23 | 7.16 | 2.00 | MapAlign | -----------------------------------------------------------------------------------------------------------------APRKLYFNEEGHPIQQFPRNKIRTAKYTPLSFIPKNLWFQFHNIANIFFLFLVILVIFPIFGGVNPGLNSVPLIVIITVTAIKDAIEDYRRTILDIELNN-APVHRLSARFHKDAWKNLVVGDFVRIYNDDELPADIIILATSDPDGACYVETKNLDGETNLKVRQALRCGRTLKHARDCERAQFVIESEPPQPNLYKYNGAIRWK-EPREMSEPIGIDNLLLRGCHLRNTWALGVVVFTGHDTKIMMNAGITPSKRARIARELNFNVICNFGILLIMCLIAAIANGIAWPALTGFITFWAAVQNLVPISLYISLEIVRTLQAFFIYSDVGMYYCIPKSWNISDDVGQIEYIFSDKTGTLTQNVMEFKKATINGQPYGAEEIAAAKVRAIRGLRELNPYLHDEDMTFIAPDFVEDLAGKNGPEQQQATEHFMLALALCHTVVAEKQ-----------------PGDPPKMIFKAQPDEAALVATARDMGFTVLGMSDGGINVNVM-GKDMHFPVLSIIEFNSSRKRMSTIVRMP-DGRILLFCKGADSVIYSRLKMRRETAQHLEMFAVEGLRTLCIAERELSEEEYREWRREHDLAATALENREEKLEEVADKIERDLTLLGGTAIEDRLQDGVPDTIALLADAGIKLWVLTGDKVETAINIGFSCNLLNNDMDLLRLQVNEYLQLAEEQLKTNLPSPTYALVIDGFTLRWVLSSLKQKFLLLCKQCKSVLCCRVSPAQKAAVVSMVKNGLDVMTLSIGDGANDVAMIQEADVGVGIAGEEGRQAVMSSDFAIGQFRFLQRLVLVHGRWSYRRLAETISNFFYKNMIWTWSIFWYQCYCNFDIAYI-FEYTYILMFNFFTSVPVILMGVDQDVSDTVSLAVPQLYRRGIERKEWFWLYMIDGVYQSVMSFFIPFIFVVGLDVSERTRLGAYIAHPAVITINGYILINTYRWDWLMLLSIVLSDVFIFFWTGVYTATTYSAGF---YQAAPQVYQELTFWMCLIVTPALCLLPRLVVKCIQKQRFPYDVDII-- | |||||||||||||
| 5 | 6lcpA | 0.25 | 0.23 | 7.00 | 0.79 | CEthreader | ----------------------------------------------------------------------------------------------------------APRKLYFNLPPELKDEEGHPIQQFPRNKIRTAKYTPLSFIPKNLWFQFHNIANIFFLFLVILVIFPIFGGVNPGLNSVPLIVIITVTAIKDAIEDYRRTILDIELNNAPVHRLSGKARHKDAWKNLVVGDFVRIYNDDELPADIIILATSDPDGACYVETKNLDGETNLKVRQALRCGRTLKHARDCERAQFVIESEPPQPNLYKYNGAIRWKEPREMSE-PIGIDNLLLRGCHLRNTWALGVVVFTGHDTKIMMNAGITPSKRARIARELNFNVICNFGILLIMCLIAAIANGIALTGFITFWAAVIVFQNLVPISLYISLEIVRTLQAFFIYSDVGMYPCIPKSWNISDDVGQIEYIFSDKTGTLTQNVMEFKKATINGQPYGEAYTEAQAGMDRRGINVEEEAKVIREEIAAAKVRAIRGLRELHDNIAPDFVEDLAGKNGPEQQQATEHFMLALALCHTVVAEKQPGDPPKMIFKAQSPDEAALVATARDMGFTVLGMSDGGINVNVMGKDMHF-PVLSIIEFNSSRKRMSTIVRM-PDGRILLFCKGADSVIYSRLDMRRETAQHLEMFAVEGLRTLCIAERELSEEEYREWRREHDLAATALENREEKLEEVADKIERDLTLLGGTAIEDRLQDGVPDTIALLADAGIKLWVLTGDKVETAINIGFSCNLLNNDMDLLRLQVNEYLQLAEEQLKTNLERPTYALVIDGFTLRWVLSSLKQKFLLLCKQCKSVLCCRVSPAQKAAVVSMVKNGLDVMTLSIGDGANDVAMIQEADVGVGIAGEEGRQAVMSSDFAIGQFRFLQRLVLVHGRWSYRRLAETISNFFYKNMIWTWSIFWYQCYCNFDIAYIFEYTYILMFNLFFTSVPVILMGVLQDVSDTVSLAVPQLYRRGIERKEWTQTKFWLYMIDGVYQSVMSFFIPFIFVVLERTRLGAYIAHPAVITINGYILINTYRWDWLMLLSIVLSDVFIFFWTGVYTATTYSAG---FYQAAPQVYQELTFWMCLIVTPALCLLPRLVVKCIQKQRFPYDVDIIRE | |||||||||||||
| 6 | 6rohA | 0.30 | 0.26 | 7.82 | 3.78 | MUSTER | ------------------------------------------------------------------------------------------------------------------PRVIHINDSANSSFGYSDNHISTTKYNFATFLPKFLFQEFSKYANLFFLCTSAIQQVPHVSPTNRYTTIGTLLVVLIVSAMKECIEDIKRANSDKELNNSTAEIFSEDDFVEKRWIDIRVGDIIRVKSEEPIPADTIILSSSEPEGLCYIETANLDGETNLKIKQSRVETAKFIDVKTLKNMNGKVVSEQPNSSLYTYEGTMTLNDR----QIPLSPDQMILRGALRNTAWIFGLVIFTGHETKLLRNATATPIKRTAVEKIINRQIIALFTVLIVLILISSIGNVIMSLFFKDFLTFWILFSNLVPISLFVTVELIKYYQAFMIGSDLDLYPTVVRTSSLVEELGQIEYIFS-KTGTLTRNIMEFKSCSIAGHCYIDKIPE----------DKTATVEDGIEVGYRKFDDLKKKLNDPSDEDSPIINDFLTLLATCHTVIPEFQS------------------DGSIKYQAASPDEGALVQGGADLGYKFIIRKPNSVTVLLETGEEKEYQLLNICEFNSTRKRMSAIFRFPD-GSIKLFCKGADTVILERLDDVEATMRHLEDYASEGLRTLCLAMRDISEGEYEEWNSIYNEAATTLDNRAEKLDEAANLIEKNLILIGATAIEDKLQDGVPETIHTLQEAGIKIWVLTGDRQETAINIGMSCRLLSEDMNLLIINEETRDDTERNLLEKINALNTLALVIDGKSLGFALEELEDYLLTVAKLCKAVICCRVSPLQKALVVKMVKRKSSSLLLAIGDGANDVSMIQAAHVGVGISGMEGMQAARSADIAVGQFKFLKKLLLVHGSWSYQRISVAILYSFYKNTALYMTQFWYVFANAFSGQSIMESWTMSFYNLFFTVWPPFVIGVDQFVSSRLLERYPQLYKLGQKGQFFSVYIFWGWIINGFFHSAIVFIGTILIYLADHWSWGVTVYTTSVIIVLGKAALVTNQWTKFTLIAIPGSLLFWLIFFPIYASIFPHANISREYYVVKHTYGSGVFWLTLIVLPIFALVRDFLWKYYKRMYEPETYHVQQF | |||||||||||||
| 7 | 7ky5A | 0.27 | 0.24 | 7.36 | 3.51 | HHsearch | -------------------------------------------------------------------------------------------------------------NRSDELRTVYYNLPLLPLAVYPRNKIRTTKYTPLTFFPKNILFQFHNFANIYFLILLILGAFQIFGVTNPGFASVPLIVIVIITAIKDGIEDSRRTVLDLEVNNTRTHILSGCRFAKDYWKNVKVGDIVRVHNNDEIPADMILLSTSDVDGACYVETKNLDGETNLKVRQSLKCSKIIKSSRDITRTKFWVESEGPHANLYSYQGNFKWQDTQNIRNEPVNINNLLLRGCTLRNTKAMGMVIFTGDDTKIMINAGVTPTKKSRISRELNFSVILNFVLLFILCFTAGIVNGVYTNGFVSFWVAVILYQSLVPISLYISVEIIKTAQAIFIYTDVLLYPCTPKSWNISDDLGQIEYIFSDKTGTLTQNVMEFKKCTINGVSYGRAYTEALAGLRVEGRREKEEISMSDNTQFCPEDLTEDLKGSSGDHQQKCCEHFLLALALCHSVLVEPNKDD----------------PKKLDIKAQSPDESALVSTARQLGYSFVGSSKSGLIVEIQ-GVQKEFQVLNVLEFNSSRKRMSCIIKIPGEPKALLICKGADSVIYSRLDRLEKTALHLEEYATEGLRTLCLAQRELTWSEYERWVKTYDVAAASVTNREEELDKVTDVIERELILLGGTAIEDRLQDGVPDSIALLAEAGIKLWVLTGDKVETAINIGFSCNVLNNDMELLVVKASGEDVEEFEELKEGLPQGNFAVIIDGDALKVALNEMRRKFLLLCKNCKAVLCCRVSPAQKAAVVKLVKKT-LDVMTLIGDGSNDVAMIQSADVGVGIAGEEGRQAVMCSDYAIGQFRYVTRLVLVHGKWCYKRLAEMIPQFFYKNVIFTLSLFWYGIYNNFDGSYLFEYTYLTFYNLAFTSVPVILLVLDQDVSDTVSMLVPQLYRVGILRKEWNQTKFLWYMLDGVYQSVICFFFPYLAYHKHRYFVGVFVTAIAVTSCNFYVFMEQYRWDWFCGLFICLSLAVFYGWTGIWTSSSSS-NEFYKG--AARVFAQPAYWAVLFVGVLFCLLPRFTIDCIRKIFYPKDIEIVRE | |||||||||||||
| 8 | 7ky5A | 0.26 | 0.23 | 7.22 | 7.48 | FFAS-3D | -------------------------------------------------------------------------------------------------------------NRSDELRTVYYNLPGLPLAVYPRNKIRTTKYTPLTFFPKNILFQFHNFANIYFLILLILGAFQIFGVTNPGFASVPLIVIVIITAIKDGIEDSRRTVLDLEVNNTRTHPNPECRFAKDYWKNVKVGDIVRVHNNDEIPADMILLSTSDVDGACYVETKNLDGETNLKVRQSLKCSKIIKSSRDITRTKFWVESEGPHANLYSYQGNFKWQDTQNGNIPVNINNLLLRGCTLRNTKWAMGMVIFTGDDTKIMINAGVTPTKKSRISRELNFSVILNFVLLFILCFTAGIVNGVYYNGFVSFWVAVILYQSLVPISLYISVEIIKTAQAIFIYNAKLDYPCTPKSWNISDDLGQIEYIFSDKTGTLTQNVMEFKKCTINGVSYGRAYKEEIAKDRETMIDELRSMSDNTQFCPEDKEIVEDLKGSSGDHQQKCCEHFLLALALCHSVLV----------------EPNKDDPKKLDIKAQSPDESALVSTARQLGYSFVGSSKSGLIVEIQ-GVQKEFQVLNVLEFNSSRKRMSCIIKIPGEPKALLICKGADSVIYSRLDRLEKTALHLEEYATEGLRTLCLAQRELTWSEYERWVKTYDVAAASVTNREEELDKVTDVIERELILLGGTAIEDRLQDGVPDSIALLAEAGIKLWVLTGDKVETAINIGFSCNVLNNDMELLVVKASGGSDPIQVVNNLVTPQGNFAVIIDGDALKVALEEMRRKFLLLCKNCKAVLCCRVSPAQKAAVVKLVKKTLDVMTLAIGDGSNDVAMIQSADVGVGIAGEEGRQAVMCSDYAIGQFRYVTRLVLVHGKWCYKRLAEMIPQFFYKNVIFTLSLFWYGIYNNFDGSYLFEYTYLTFYNLAFTSVPVILLAVDQDVSDTVSMLVPQLYRVGILRKEWNQTKFLWYMLDGVYQSVICFFFPYLAYHKNRYFVGVFVTAIAVTSCNFYVFMEQYRWDWFCGLFICLSLAVFYGWTGIWT---SSSSSNEFYKGAARVFAQPAYWAVLFVGVLFCLLPRFTIDCIRKIFYPKDIEIVR- | |||||||||||||
| 9 | 6rohA | 0.23 | 0.18 | 5.74 | 1.60 | EigenThreader | -------------------------------------------------------------------------------------------------------------------PRIHINDSLANSSFGYSDNHISTTKYNLPKFLFQEFS---KYANLFFLCTSAIQQVPHVSPTNRYTTIGTLLVVLIVSAMKECIEDIKRANSDKELNNSTAEIFSEAHFVEKRWIDIRVGDIIRV-KSEEPIPADTIILSSEPEGLCYIETANLDGET-NLKIKQSR--VETAKF-------IKVVSEQPNSSLYTYEGTMTLN---DRQIPLSPD-QMILRGATLNTAWIFGLVIFTGN-------ATATPIKRTAVEKIINRQIIALFTVLIVLILISSIG------NVIMSTADLFFKDFLTFWILFVTVELIKYYQAFMIGSDLDLYYEKTDTPTSLVEELGQIEYIFSKTGT-----LEFKSCSIAGHIDKIPED----------------KTATVEDGIEV----GYRKFNDPSDE--DSPIINDFLTLLATCH--------TVIPEFQ------SDGSIK-YQAASPDEGALVQGGADLGYKFIIRKPNSVTVLLEETGEEKEYQLLNICEFNSTRKRMSAIFRFPDGSLFCKGA-----DTVILERLDEATMRHLEDYASEGLRTLCLAMRDIEEWNSIYNEAATDEAANLIEK-------------NLILIGATAIEDDG---VPETIHTLQEAGIKIWVLTGDRQETAINIGMSCRLLSEDM-NLLIINEETRDDNLLEKINALNEHQLALVIDGKSLGFA----LDYLLTVAKLCKAVICCRVSPLQKALVVKMVKRKSSSLLLAIGDGANDVSMIQAAHVGVGISGMEGMQAARSADIAVGQFKFLKKLLLVHGSWSYQRISVAILYSFYKNTALYMTQFWYVFAMESWTMSFYNLF----------FPPFVIGVFDQFVSSRLLERYPQLYKLGQKGQFFSVYIFWGWIINGFFHSAIVFIGTILIYRLADHWSWGVTVYTTSVIIVLGKAALVTNQSLLFWLIFFPIYAPHAN----------ISREYYGVVKHTYG--SGVFWLTLPIFALVRDFLWKYYKRMYEPETYHVQQFQNA | |||||||||||||
| 10 | 6rohA | 0.30 | 0.26 | 7.81 | 5.18 | CNFpred | -------------------------------------------------------------------------------------------------------------------RVIHINDSLANSFGYSDNHISTTKYNFATFLPKFLFQEFSKYANLFFLCTSAIQQVPHVSPTNRYTTIGTLLVVLIVSAMKECIEDIKRANSDKELNNSTAEIFSEDDFVEKRWIDIRVGDIIRVKSEEPIPADTIILSSSEPEGLCYIETANLDGETNLKIKQSRVETAKFIDVKTLKNMNGKVVSEQPNSSLYTYEGTMTLND----RQIPLSPDQMILRGATLRNTWIFGLVIFTGHETKLLRNATATPIKRTAVEKIINRQIIALFTVLIVLILISSIGNV-AGLFFKDFLTFWILFSNLVPISLFVTVELIKYYQAFMIGSDLDLYPTVVRTSSLVEELGQIEYIFSMKTGTLTRNIMEFKSCSIAGHCYIDKIPEDKTATVEDGIEVGY----------RKFDDLKKKLNDPSDEDSPIINDFLTLLATCHTVIPEFQS------------------DGSIKYQAASPDEGALVQGGADLGYKFIIRKPNSVTVLLEEGEEKEYQLLNICEFNSTRKRMSAIFRFP-DGSIKLFCKGADTVILERLDYVEATMRHLEDYASEGLRTLCLAMRDISEGEYEEWNSIYNEAATTLDNRAEKLDEAANLIEKNLILIGATAIEDKLQDGVPETIHTLQEAGIKIWVLTGDRQETAINIGMSCRLLSEDMNLLIINEE-TRDDTERNLLEKIN-NTLALVIDGKSLGFALEELEDYLLTVAKLCKAVICCRVSPLQKALVVKMVKRKSSSLLLAIGDGANDVSMIQAAHVGVGISGMEGMQAARSADIAVGQFKFLKKLLLVHGSWSYQRISVAILYSFYKNTALYMTQFWYVFANAFSGQSIMESWTMSFYNLFFTVWPPFVIGVFDFVSSRLLERYPQLYKLGQKGQFFSVYIFWGWIINGFFHSAIVFIGTILIY-ADHWSWGVTVYTTSVIIVLGKAALVTNQWTKFTLIAIPGSLLFWLIFFPIYASIFPHANISREYYGVVKHTGSGVFWLTLIVLPIFALVRDFLWKYYKRMYEPE------- | |||||||||||||
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| References: | |
| 1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |