>O43818 (475 residues) MSATAAARKRGKPASGAGAGAGAGKRRRKADSAGDRGKSKGGGKMNEEISSDSESESLAP RKPEEEEEEELEETAQEKKLRLAKLYLEQLRQQEEEKAEARAFEEDQVAGRLKEDVLEQR GRLQKLVAKEIQAPASADIRVLRGHQLSITCLVVTPDDSAIFSAAKDCSIIKWSVESGRK LHVIPRAKKGAEGKPPGHSSHVLCMAISSDGKYLASGDRSKLILIWEAQSCQHLYTFTGH RDAVSGLAFRRGTHQLYSTSHDRSVKVWNVAENSYVETLFGHQDAVAALDALSRECCVTA GGRDGTVRVWKIPEESQLVFYGHQGSIDCIHLINEEHMVSGADDGSVALWGLSKKRPLAL QREAHGLRGEPGLEQPFWISSVAALLNTDLVATGSHSSCVRLWQCGEGFRQLDLLCDIPL VGFINSLKFSSSGDFLVAGVGQEHRLGRWWRIKEARNSVCIIPLRRVPVPPAAGS |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 | | | | | | | | | | | | | | | | | | | | | | | MSATAAARKRGKPASGAGAGAGAGKRRRKADSAGDRGKSKGGGKMNEEISSDSESESLAPRKPEEEEEEELEETAQEKKLRLAKLYLEQLRQQEEEKAEARAFEEDQVAGRLKEDVLEQRGRLQKLVAKEIQAPASADIRVLRGHQLSITCLVVTPDDSAIFSAAKDCSIIKWSVESGRKLHVIPRAKKGAEGKPPGHSSHVLCMAISSDGKYLASGDRSKLILIWEAQSCQHLYTFTGHRDAVSGLAFRRGTHQLYSTSHDRSVKVWNVAENSYVETLFGHQDAVAALDALSRECCVTAGGRDGTVRVWKIPEESQLVFYGHQGSIDCIHLINEEHMVSGADDGSVALWGLSKKRPLALQREAHGLRGEPGLEQPFWISSVAALLNTDLVATGSHSSCVRLWQCGEGFRQLDLLCDIPLVGFINSLKFSSSGDFLVAGVGQEHRLGRWWRIKEARNSVCIIPLRRVPVPPAAGS |
Prediction | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSCCCCCSSSSHHHHHHHHHHHCCCCSSSSSSCCCCCCHHHHHHHCCCCSSSSSSSCCCCCCCCCCSSSSSCCCCCCSSSSSSCCCCCSSSSSSCCCSSSSSSCCCCCSSSSSCCCCCCCCCCCCCCCCCSSSSSSCCCCCSSSSSSCCCSSSSSSCCCCCSSSSSCCCCCCSSSSSSCCCCCSSSSSSCCCSSSSSSCCCCCSSSSSCCCCCCSSSSSSCCCCCSSSSSSCCCSSSSSSCCCCCSSSSSCCCCCSSSSSSSCCCSSSSSSCCCSSSSSSCCCCCSSSSSCCCCCCCCCCCCCCCCSSSSSSSCCCCCSSSSSSCCCSSSSSSCCCCCSSSSSCCCCCCCCCSSSSSSCCCCCSSSSSSCCCCCSSSSSSCCCCCSSSSSSCCCCCCCCCCCCC |
Confidence | 9987543333465566666677653323466764443100244557422466553222223346887775773156783773245665777415585689995577542022223201412756331123116998133898179998799999899998999928994999878989479985166666565567888978999997999989997289918996679995788764899968999994899989998189919988789992888574888887899996999989999189949999789991899836898389999918995999848990999878999264663156554466788878728999993899989999289959997789993899861678888858999998999989999847998899998788932589982689877778999 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 | | | | | | | | | | | | | | | | | | | | | | | MSATAAARKRGKPASGAGAGAGAGKRRRKADSAGDRGKSKGGGKMNEEISSDSESESLAPRKPEEEEEEELEETAQEKKLRLAKLYLEQLRQQEEEKAEARAFEEDQVAGRLKEDVLEQRGRLQKLVAKEIQAPASADIRVLRGHQLSITCLVVTPDDSAIFSAAKDCSIIKWSVESGRKLHVIPRAKKGAEGKPPGHSSHVLCMAISSDGKYLASGDRSKLILIWEAQSCQHLYTFTGHRDAVSGLAFRRGTHQLYSTSHDRSVKVWNVAENSYVETLFGHQDAVAALDALSRECCVTAGGRDGTVRVWKIPEESQLVFYGHQGSIDCIHLINEEHMVSGADDGSVALWGLSKKRPLALQREAHGLRGEPGLEQPFWISSVAALLNTDLVATGSHSSCVRLWQCGEGFRQLDLLCDIPLVGFINSLKFSSSGDFLVAGVGQEHRLGRWWRIKEARNSVCIIPLRRVPVPPAAGS |
Prediction | 7646646543546565555655555345556655555364455535541543644454355454365354021106421000044215403541654030200145430530253035540301310054042742530210301332410201015342200002010000120733420210343454453414003423202010363321000020324231307325122204015233202010253421000023314241306213122204005326203030343320000020202102406543313030151201000002521000002020002010643320332454331421444423100000000041312000020210242306445332404343504110100000041313000002332000002054141110020035341314568 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSCCCCCSSSSHHHHHHHHHHHCCCCSSSSSSCCCCCCHHHHHHHCCCCSSSSSSSCCCCCCCCCCSSSSSCCCCCCSSSSSSCCCCCSSSSSSCCCSSSSSSCCCCCSSSSSCCCCCCCCCCCCCCCCCSSSSSSCCCCCSSSSSSCCCSSSSSSCCCCCSSSSSCCCCCCSSSSSSCCCCCSSSSSSCCCSSSSSSCCCCCSSSSSCCCCCCSSSSSSCCCCCSSSSSSCCCSSSSSSCCCCCSSSSSCCCCCSSSSSSSCCCSSSSSSCCCSSSSSSCCCCCSSSSSCCCCCCCCCCCCCCCCSSSSSSSCCCCCSSSSSSCCCSSSSSSCCCCCSSSSSCCCCCCCCCSSSSSSCCCCCSSSSSSCCCCCSSSSSSCCCCCSSSSSSCCCCCCCCCCCCC MSATAAARKRGKPASGAGAGAGAGKRRRKADSAGDRGKSKGGGKMNEEISSDSESESLAPRKPEEEEEEELEETAQEKKLRLAKLYLEQLRQQEEEKAEARAFEEDQVAGRLKEDVLEQRGRLQKLVAKEIQAPASADIRVLRGHQLSITCLVVTPDDSAIFSAAKDCSIIKWSVESGRKLHVIPRAKKGAEGKPPGHSSHVLCMAISSDGKYLASGDRSKLILIWEAQSCQHLYTFTGHRDAVSGLAFRRGTHQLYSTSHDRSVKVWNVAENSYVETLFGHQDAVAALDALSRECCVTAGGRDGTVRVWKIPEESQLVFYGHQGSIDCIHLINEEHMVSGADDGSVALWGLSKKRPLALQREAHGLRGEPGLEQPFWISSVAALLNTDLVATGSHSSCVRLWQCGEGFRQLDLLCDIPLVGFINSLKFSSSGDFLVAGVGQEHRLGRWWRIKEARNSVCIIPLRRVPVPPAAGS | |||||||||||||||||||
1 | 5wlcSG | 0.27 | 0.19 | 5.82 | 1.00 | DEthreader | ---------------------------------------------------------------------------------------------------------------------G-RVFRY--FGDKLLISEAK-QSFTRVGENNLTCISCFQPRLFAYTVSKDLQLTKYDIDKPKKLKYAKGGAKYIPT-TEGHYDEILTVAASPDGKYVVTGGRDRKLIVWSTESLSPVKVIPTDRGEVLSLAFRKNSDQLYASCADFKIRTYSINQFSQLEILYGHHDIVEDISALAM-ERCVTVGARRTAMLWKIPDETRLTFRGGEGSIDVVSMVDDFHFITGSDNGNICLWSLAKKKPIFTERIAHGILEGKKLLQPFWITSLYAIPYSNVFISGSWSGSLKVWKISNLRSFELLGELSGAKGVVTKIQVVEEKFRILASIAKEH-------VSGARNGIYSAVID-Q-------- | |||||||||||||
2 | 5i2tA | 0.15 | 0.14 | 4.68 | 2.85 | FFAS-3D | -------SNLLGTVYRQGNITFSDDGKQLLSPVGN-RVSVFDLINNKSFTFEYEHRKNIAAIDLNKQGTLLISIDEDGRAILVNFKARNVHAGHFQDITSLTWSQD--SRFILTTSKDLSAKIWSVD----SEEKNLAATTFNGHRDYVMGAFFSHDQEKIYTVSKDGAVFVWEFTSWRITKKHF---------FYANQAKVKCVTFHPATRLLAVGFTSGEFRLYDLPDFTLIQQQQGHFDSTNSLAYSPDGSRVVTASEDGKIKVWDITSGFCLATFEEHTSSVTAVQFAKRGQVMFSSSLDGTVRAWDLIRYRNFALSGHEGPVSCLSFSQENSLASASWDKTIRIWSIFGRSQQ-----------VEPIEVYSDVLALSMRPDGKEVAVSTLKGQISIFNIEDAKQVGNIDCRKIISKFFTTIHYSFDGMAIVAGG--NNNSICLYDVPNEVLLKRFISRNEVRVTSVQFS | |||||||||||||
3 | 4jxmA | 0.99 | 0.69 | 19.34 | 2.33 | SPARKS-K | ---------------------------------------------------------------------------------------------------------------------------------EIQAPASADIRVLRGHQLSITCLVVTPDDSAIFSAAKDCSIIKWSVESGRKLHVIP------RAKPPGHSSHVLCMAISSDGKYLASGDRSKLILIWEAQSCQHLYTFTGHRDAVSGLAFRRGTHQLYSTSHDRSVKVWNVAENSYVETLFGHQDAVAALDALSRECCVTAGGRDGTVRVWKIPEESQLVFYGHQGSIDCIHLINEEHMVSGADDGSVALWGLSKKRPLALQREAHGLRGEPGLEQPFWISSVAALLNTDLVATGSHSSCVRLWQCGEGFRQLDLLCDIPLVGFINSLKFSSSGDFLVAGVGQEHRLGRWWRIKEARNSVCIIPLR---------- | |||||||||||||
4 | 6t9iD | 0.18 | 0.16 | 5.09 | 0.60 | EigenThreader | HRTEAMLRAESGRTLTPQNKQSPANTKTGKFPEQSSIPPNPGKTAKPISNPTPENYIRAYSMLKNWVDSSLEIYKPELSYIMYPIFIYLFLNLVDHIKVASAFQSHTTLNLLLYFLNLEIQKVKESRDAIKLDNLQLALYTFQNTNKDMSCLDFSDDCRIAAAGFQDSYIKIWSLDGSSL------NNPNIALNNNGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLGHYFATASHDQTARLWSCD--HPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDVSTGDVRLFLGHTAPVISIAVCPDGWLSTGSEDGIINVWDIGTGKRLKQMRGHG----------KNAIYSLSYSKEGNVLISGGADHTVRVWDLTSDLVASFYT----KKTPVFKVKFSRSNLALAGGAFRP-------------------------------- | |||||||||||||
5 | 4jxmA | 0.98 | 0.68 | 18.99 | 0.39 | MapAlign | ----------------------------------------------------------------------------------------------------------------------------------IQAPASADIRVLRGHQLSITCLVVTPDDSAIFSAAKDCSIIKWSVESGRKLHVIPRA------KPPGHSSHVLCMAISSDGKYLASGDRSKLILIWEAQSCQHLYTFTGHRDAVSGLAFRRGTHQLYSTSHDRSVKVWNVAENSYVETLFGHQDAVAALDALSR-ECCVTAGGDGTVRVWKIPEESQLVFYGHQGSIDCIHLINEEHMVSGADDGSVALWGLSKKRPLALQREAHGLRGEPGLEQPFWISSVAALLNTDLVATGSHSSCVRLWQCGEGFRQLDLLCDIPLVGFINSLKFSSSGDFLVAGVGQEHRLGRWWRIKEARNSVCIIPLR---------- | |||||||||||||
6 | 5mzhA | 0.20 | 0.16 | 5.07 | 1.62 | MUSTER | -----------------------------------KLRKFLLRYYPPGIIERVMKQKPIDLLDLTPDVD-------------VEVLLSQIIRQE---------------PLISENRRPALRQLIHRLIDKM--LEFTLFKVLRAHILPLTNCAFNKSGDRFITGSYDRTCKVWNTFTGEEVFTLE-----------GHKNVVYAIAFNPYGDKIVTGSFDKTCKLWDAYTGQLYYTLKGHQTEIVCLSFNPQSTIIATGSMDNTAKLWDVETGQERATLAGHRAEIVSLGFNTGGDLIVTGSFDHDSRLWDVRTGCVHVLSGHRGEVSSTQFNYAGLVVSGSIDCTSRLWDVRSGRCLSVKQ-----------GHTDEVLDVAFDAAGTKMVSASADGSARLYHTLTGVCQHTLV---GHEGEISKVAFNPQGTRLITAS--SDKTCRLWDCDTGECLQVLEGHTDEIFSCAEGD | |||||||||||||
7 | 4jxmA | 1.00 | 0.69 | 19.45 | 0.31 | CEthreader | ---------------------------------------------------------------------------------------------------------------------------------EIQAPASADIRVLRGHQLSITCLVVTPDDSAIFSAAKDCSIIKWSVESGRKLHVIPRA------KPPGHSSHVLCMAISSDGKYLASGDRSKLILIWEAQSCQHLYTFTGHRDAVSGLAFRRGTHQLYSTSHDRSVKVWNVAENSYVETLFGHQDAVAALDALSRECCVTAGGRDGTVRVWKIPEESQLVFYGHQGSIDCIHLINEEHMVSGADDGSVALWGLSKKRPLALQREAHGLRGEPGLEQPFWISSVAALLNTDLVATGSHSSCVRLWQCGEGFRQLDLLCDIPLVGFINSLKFSSSGDFLVAGVGQEHRLGRWWRIKEARNSVCIIPLR---------- | |||||||||||||
8 | 3jctx | 0.20 | 0.17 | 5.41 | 2.80 | FFAS-3D | -------KKQKKEAQLPREVAIIPKDKFQALDTGDNALRVPGAISEKQLEELLNQLNGT-SVPYTFSCTIKASDPYSSLIKVFKVKPVSAIAGHGSTILCSAFAPHT-SSRMVTGAGDNTARIWDC-------DTQTPMHTLKGHYNWVLCVSWSPDGEVIATGSMDNTIRLWDPKSGQ----------CLGDALRGHSKWITSLSKPGSKPRLASSSKDGTIKIWDTVSRVCQYTMSGHTNSVSCVKWG-GQGLLYSGSHDRTVRVWDINSQGRCINILKSHAHWVNHLSGNSEEMMVTASDDYTMFLWNPLKSTKPRMTGHQKLVNHVAFSPDGYIVSASFDNSIKLWDGRDGKFISTFR-----------GHVASVYQVAWSSDCRLLVSCSKDTTLKVWDVRTRKLSVDLPGH---KDEVYTVDWSVDGKRVCSGG--KDKMVRLWT------------------------ | |||||||||||||
9 | 4jxmA | 1.00 | 0.69 | 19.40 | 1.78 | MUSTER | ---------------------------------------------------------------------------------------------------------------------------------EIQAPASADIRVLRGHQLSITCLVVTPDDSAIFSAAKDCSIIKWSVESGRKLHVIPR------AKPPGHSSHVLCMAISSDGKYLASGDRSKLILIWEAQSCQHLYTFTGHRDAVSGLAFRRGTHQLYSTSHDRSVKVWNVAENSYVETLFGHQDAVAALDALSRECCVTAGGRDGTVRVWKIPEESQLVFYGHQGSIDCIHLINEEHMVSGADDGSVALWGLSKKRPLALQREAHGLRGEPGLEQPFWISSVAALLNTDLVATGSHSSCVRLWQCGEGFRQLDLLCDIPLVGFINSLKFSSSGDFLVAGVGQEHRLGRWWRIKEARNSVCIIPLR---------- | |||||||||||||
10 | 5mzhA | 0.19 | 0.15 | 4.96 | 2.05 | SPARKS-K | -------------------KLRKFLLRYYPPGIILQYERVMKQKPIDLLDLTPDVD----------------------VEVLLSQIIRQEPL-------------------ISENRRPALRQLIHRLIDKML--EFTLFKVLRAHILPLTNCAFNKSGDRFITGSYDRTCKVWNTFTGEEVFTLE-----------GHKNVVYAIAFNPYGDKIVTGSFDKTCKLWDAYTGQLYYTLKGHQTEIVCLSFNPQSTIIATGSMDNTAKLWDVETGQERATLAGHRAEIVSLGFNTGGDLIVTGSFDHDSRLWDVRTQCVHVLSGHRGEVSSTQFNAGTLVVSGSIDCTSRLWDVRSGRCLSVKQGHTDE-----------VLDVAFDAAGTKMVSASADGSARLYHTLTGVCQHTLV---GHEGEISKVAFNPQGTRLITASSDK--TCRLWDCDTGECLQVLEGHTDEIFSCAFNY | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |