Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| SS Seq | CCSSSCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCSSCCSSCCCCCCCCCCCCCCCCCCCCSSSSSSSSCCCCSSSSSCCCCCCCCCCCSSSSSSCCCCCSSSSSCCCCSSSSSSCCCCCCCCHHHHHHHHHHHCCCCCCCCCCSSSSSSSSCCCCCCHHHHHHHHHHHHCCCCSSSSSSSCCCCCCSSCCCCCCCSSSSSCCCCSSSSSSSCC MVKIAFNTPTAVQKEEARQDVEALLSRTVRTQILTGKELRVATQEKEGSSGRCMLTLLGLSFILAGLIVGGACIYKYFMPKSTIYRGEMCFFDSEDPANSLRGGEPNFLPVTEEADIREDDNIAIIDVPVPSFSDSDPAAIIHDFEKGMTAYLDLLLGNCYLMPLNTSIVMPPKNLVELFGKLASGRYLPQTYVVREDLVAVEEIRDVSNLGIFIYQLCNNRKSFRLRRRDLLLGFNKRAIDKCWKIRHFPNEFIVETKICQE |
1 | 1oh2Q | 0.09 | 0.08 | 3.09 | 0.79 | CEthreader | | SLYGRNFGDIDDSSNSVQNYILTMNHFAGPLQMMVSGLRAKDNDERKDSNGNLAKGDAANTGVHALLGLHNDSFYGLRDGSSKTALLYGHGLGAEVKGIGSDGALRPGADTWRIASYGTTPAMLAQRSKDRYADGDSYQWATFN----LRLIQAINQNFALAYEGSYQYMDLKPEGYNDRQ---------AVNGSFYKLTFAPTFKVGSIGDFF----SRPEIRFYTSWMDWSKKLNNYASDDALGSDGFNSGGEWSFGVQME |
2 | 7kznE | 0.12 | 0.09 | 3.25 | 0.75 | EigenThreader | | ANT----NAVILVNK-----AMSHVEG--------GWPKDVDYTEAEHTIRYRKKVEKIRTVVQLGSSVEDLIKQNNAVNIKRSASYVNWHPD------------GSVPKVVVAYSILQFMPLSSYIWDVNNPNTPEYEMVGAGQYNGQLAYFDVRKGNGPCMTVSTDGNPLKEKN---------SETTVGGVCLTNFMVGTEQG------------------QIFSCNRRVKYVLSGYHPTYLTGGTWSPSRPGVFFTIKMD |
3 | 2yadA | 0.14 | 0.04 | 1.31 | 0.70 | FFAS-3D | | --------------------------------------------------------------------------------------------------------------------------------TTATFSIGSTGLVVYDYQQLLIAYKPAPGTCCYIK-IAPESIPSLEALTRKVHNFQECSLGA------------------------VSTLCGEVPLYYI------------------------------------ |
4 | 4qanA | 0.10 | 0.10 | 3.50 | 0.59 | SPARKS-K | | ESEVLNVTESLQKESEKKNDDETALNFVKTAEELPGQLIDLPAPTSDYSYYFPLTSAETKAYIEQFEELSTEI------PEETLEVLEIAEKKEKEREEQECLAAQEVSELEIYVKCG--EQSYRLGFTAVQYEKN---WKIHSLKEGLLACVQEEGANYFQAPISEKT--PQRAVEQFIYAIEKGFATTESS--QDTSP--ELLKKQGEYAKELKTLTEDARLYKLNPEYVYLDLIKVNTETVKQYASYNGKNYLTGYTLCR |
5 | 6cxtB | 0.08 | 0.04 | 1.68 | 0.62 | CNFpred | | ------------------------------------------------DTGLLFAGAAHTFACSMPILE-KHQLLPDLATG-RKIAANAISEASAGSDIS---------NLATTAQKE--GDYYVLNGG--------KSYVTNGSIADYYVVYATTGQTAFVVPRNTISVGNDYHKLGLRS-------APLNQVFFDNCTIHYALGREGQGARIFAASMD------------------------------------------- |
6 | 6w1sI | 0.04 | 0.03 | 1.46 | 0.83 | DEthreader | | HLEVLHIEKLLIDSVHARAHQLQELKILIVPILEQKGKPTQLSYNYYFKLHFVAMCTNGQFNHAIRTFRVAELVFANCPLNGVFARSL----------------------PEIPHSEVRVYKLILCY---------GTTKGSSISIIALGTVG----PNSGNCHNILHQLEMFNKTPNVVQLLQ--VL-DT--PLNAINKLP--------------------------CFSAFMYCIPKFLFPGLVPGLAG---SYLCRPKTN |
7 | 1oh2Q | 0.08 | 0.08 | 2.95 | 0.89 | MapAlign | | ----------IGPLGNAADTYVIMNLEHKQTLDNGATTRFKVMVADGQTSYNDWTASTSDLNVLQAFVELGNLPTFAGPFKGSTLWAGKRFDRD-NFAIHWILSCVVFLAGTGGGIDVKWLRSNFSLYGRNFNSVQNYILTMNHFALQMMVSGLRAKATGVHALLGLHND-----------SFYGLRDG-----SSKTALLYGHGLGAEVKGIGSDGALRPGADTWRIASYGTDGDSYQWATFNLRLIQINQNFALAYEGSYQ |
8 | 5haaA1 | 0.07 | 0.06 | 2.66 | 0.48 | MUSTER | | EIGIIAVGGYNEMGR--RVNEDIIIMGIRLDRVQIHEDVDTDRMHSLELIEMGAIPDDTIMN-VRAIVCAIPKLAHRY---AAPIIATTALIKHQIDSERKFGVKNNIVALKAGETLEITKDITIEFINTQ-HSIIDTVFVAIHTPSGAVVYADFK--------FDRTPTLGEVPDFDRLKELGKEGVI---ALITESTNAGRNGKYREDHWELLRMLKPEHTIQMHSEYIQM--AEDAGYSLGDTLH-LLRNG--EELYIEE |
9 | 2yadA | 0.16 | 0.05 | 1.51 | 2.84 | HHsearch | | -------------------------------------------------------------------------------------------------------------------------TT-------ATFSIGSTGLVVYDYQQLLIAYKPAPGTCCYI-KIAPESIPSLEALTRKVHNFQ-------E----------------CSLG-AVSTLCGEVPLYYI------------------------------------ |
10 | 5nj5A | 0.08 | 0.07 | 2.67 | 0.49 | CEthreader | | ------------------------------------------------SLNLVSEQLLAANGLKHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNIDQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRDSGDGKVQTLGAVEHSPLYTSVDPLQSKLDILRRVDKVAREADKRVQEVTASLSGVYELILVAATDGTLAADVRPLVRLSVSVLVEEDGKRERGASGGGGRFGYEFFLADLDGEV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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