Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440
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| SS Seq | CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCSSSCCCSSSSSCCCCSSSSSSSSCCCCCCCCSSSSSSSCCCCCCSSSCCCCCSSCCCCCCCSSSSCCCCCCCSSSSSCCCCHHHCSSSSSSSSSCCCCCCSSSSSSSSSSSCCCCCCSSCCCCSSSCCCSSSSSSSSSCCCCCCCCSSSSSSCCCCCCCCCCSSSCSSSSSSCCCHHHCSSSSSSSSSCCCCSSSSSSSSSSSSSSCCCSSSSSSCCCCCCCSSSSCCCCSSSSCCCSSSSSSSSSCCCCCSSSSSSCCSSCCCCSSCCCCSSSSCCCCCCCCSSSSSSSSSCCCCCSSSSSSSSSSCCCCCCCCSSSSSSSSSSSSSSSSSSSSSSSSSSSSCCCCCCCCCCCCCCCSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSSCCCCCCCCCCCCCCCCSSSSSCC MQGAQEASASEMLPLLLPLLWAGALAQERRFQLEGPESLTVQEGLCVLVPCRLPTTLPASYYGYGYWFLEGADVPVATNDPDEEVQEETRGRFHLLWDPRRKNCSLSIRDARRRDNAAYFFRLKSKWMKYGYTSSKLSVRVMALTHRPNISIPGTLESGHPSNLTCSVPWVCEQGTPPIFSWMSAAPTSLGPRTTQSSVLTITPRPQDHSTNLTCQVTFPGAGVTMERTIQLNVSYAPQKVAISIFQGNSAAFKILQNTSSLPVLEGQALRLLCDADGNPPAHLSWFQGFPALNATPISNTGVLELPQVGSAEEGDFTCRAQHPLGSLQISLSLFVHWKPEGRAGGVLGAVWGASITTLVFLCVCFIFRVKTRRKKAAQPVQNTDDVNPVMVSGSRGHQHQFQTGIVSDHPAEAGPISEDEQELHYAVLHFHKVQPQEPKVTDTEYSEIKIHK |
1 | 5vkjA | 0.22 | 0.14 | 4.46 | 2.63 | FFAS-3D | | -------------------------GDSSKWVFEHPETLYAWEGACVWIPCTYR-ALDGDLESFILFHNPEYNKARLYESTKDGKVPSEQKRVQFLGD-KNKNCTLSIHPVHLADSGQLGLRMESKTEKWME---RIHLAVSERPFPPHIQLPPEIQESQEVTLTCLLAFSCYGYPIQLQWLLEGSTSLTIKSVFTRSELKFSPQWSHHGKIVTCQLQDADGKFLSADTVQLNVKHTPKLEIKVT-------------PSDAIVREGDSVTMTCEVSSSEYTTVSWLKDGTSLKKQ---NTFTLNLREVTKDQSGKYCCQVSNDVGPGRSEVFLQVQ-------------------------------------------------------------------------------------------------------------------- |
2 | 4ofyD | 0.16 | 0.13 | 4.35 | 1.22 | MUSTER | | ------------------------------FFLESPSNLSTIAGESITFRCSAEKSPEPIVY--SQWKSNTGS---LLGYHQEGILPGHQGRFSYIKQ-NAEELHLKITHVNLDDDGEYECQMLHPEE--GPIRAKSFLNIIVPPQLVYFSNYQPVKENTPLNITCVVPNVK---PEPEVLWYMDGKVMSRDVFTVYTSLVVQSDRNDHGKVITCEAFQKETDIRITTNTTLDVLFPPSDPTVEIL------------RNPSALRSGDNVTIACSVTGNPPPDVFWYHENKRLQSHSKEIKNIYSFIASQNDNMAEYECRANNSR-PKRKAMKLEVNYPPASVELFGESNIRYGSSANIQCKSLSNPASQITWIINGRSVPTPTQREFVVENGIVSSSCVSVHSNELSVEAHQIN---PEGSSAKQHVIKIIA-------------------- |
3 | 2wimA | 0.17 | 0.10 | 3.28 | 1.47 | SPARKS-K | | --------------------------ALLQVTIS-LSKVELSVGESKFFTCTAIGEPE-----SIDWYNPQ----------GEKIISTQR----VVVQKEGVRSRLTIYNANIEDAGIYRCQATDA--KGQTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSS----SPAPAVSWLYHTTISDNRFAMLNNNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPP---------------AISMPQKSFNATAGEEMTFSCRASGSPEPAISWFRNGKLIEENEKGSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQV--------------------------------------------------------------------------------------------------------------------- |
4 | 5lf5A | 0.22 | 0.19 | 6.14 | 1.22 | MUSTER | | ----------------------------GHWGAWMPSTISAFEGTCVSIPCRFDFPDELRPVVHGVWYFNSPYPPVVFKSRTQVVHESFQGRSRLLGDLGLRNCTLLLSTLSPELGGKYYFRGDLGGYNQYTFSEHSVLDIVNT---PNIVVPPEVVAGTEVEVSCMVPDNCPE-LRPELSWLGHEGLGEEGTWVQVSLLHFVPTREANGHRLGCQAAFPNTTLQFEGYASLDVKY---------------PPVIVEMNSSVEAIEGSHVSLLCGADSNPPPLLTWMRDGMVLREAV-AKSLYLDLEEVTPGEDGVYACLAENAYGQDNRTVELSVMYAPWKPTVNGTVVAVEGETVSILCSTQSNPDPILTIFKEKQILATVIYESQLELPAVTPEDENQYGQRATANETEREFVYSERSGLLLTSILTIRGQAQAPPRLYGTQSLELPFQG |
5 | 5lfrA | 0.27 | 0.17 | 5.29 | 3.06 | CNFpred | | ----------------------------GHWGAWMPSTISAFEGTCVSIPCRFDFPELRPAVVHGVWYFNSP-PPVVFKSRTQVVHESFQGRSRLLGDLGLRNCTLLLSTLSPELGGKYYFRGDLGGYNQYTFSEHSVLDIVN---TPNIVVPPEVVAGTEVEVSCMVPDNCP-ELRPELSWLGHEGLGEPTVLGQVSLLHFVPTREANGHRLGCQAAFPNTTLQFEGYASLDVKYPP---VIVEMN------------SSVEAIEGSHVSLLCGADSNPPPLLTWMRDGMVLREAV-AKSLYLDLEEVTPGEDGVYACLAENAYGQDNRTVELSVMYA------------------------------------------------------------------------------------------------------------------ |
6 | 4ofyD | 0.15 | 0.12 | 4.02 | 1.44 | SPARKS-K | | ------------------------------FFLESPSNLSTIAGESITFRCSAEKSPEPIVY--SQWKSNTGS--LLGYHQEGILPGHQG-RFSYIK-QNAEELHLKITHVNLDDDGEYECQMLHPEE--GPIRAKSFLNIIVPPQLVYFSSIIAVKENTPLNITCVVPNVKP---EPEVLWYMDGKVMSRDVKQAYTSLVVQSDRNDHGKVITCEAFQKETDIRITTNTTLDVLFPPSDPTVEILRNPS------------ALRSGDNVTIACSVTGNPPPDVFWYHENKRLQSHSTLDKNIYSFIASQNDNMAEYECRANNSRPKR-KAMKLEVNYPPASV-------------------------------------ELFGESNIRYGSSANKSLPSNPASQNGRSVPTPTQEFVVENGIVSSSCVSVH-SNELSVEAHQINVECMATNP |
7 | 3alpA | 0.17 | 0.10 | 3.43 | 2.50 | FFAS-3D | | ------------------------------------DSMYGFIGTDVVLHCSFANPLPSVKITQVTWQKSTNGVAIYNPSMGVSVLAPYRERVEFL-RPSFTDGTIRLSRLELEDEGVYICEFATFPTGNRESQLNLTVMTNWIEGTQAVLRAKKGQDDKVLVATCTSANGK---PPSVVSWETRLKGNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQYEP----------------EVTIEGFDGNWYLQRMDVKLTCKADANPPAEYHWTTLNGSLPKGVEAQNRTLFFGPINYSLAGTYICEATNPIGTRSGQVEVNITEA------------------------------------------------------------------------------------------------------------------ |
8 | 5o5gA | 0.17 | 0.14 | 4.63 | 1.21 | MUSTER | | ------------------------QEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTP----TIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRK--------SRPDEGVYVCVARNYLGE--AVSHNASLEVAILRDDFRQNPSDMVAVGEPAVMECQPPR---GHPEPTISWKKDGSPLDDKDTIRGGKLMITYTRKSDAGKYVCVGTNMVGERES------------EVAELTVL----ERPSFVKRPSNLAVTVDDSAEFKCEARGDPVPTVRWRKDDGELPKSRIRDDHTLKIRKVTAGDMGSYTCVAENMVGKAEASATLTVQEPPHFVVKPRDQVVALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSYSSSRF--SVSQTGDLTITNVQRSDVGY----LNVAGSIITKAYLEVTG-------------------- |
9 | 5vkjA | 0.24 | 0.15 | 4.75 | 1.46 | SPARKS-K | | -----------------------ETGDSSKWVFEHPETLYAWEGACVWIPCTYRALDGDLE--SFILFHNPEYNTRLYESTKDGKVPSEQKRVQFLGD-KNKNCTLSIHPVHLADSGQLGLRMESKT---EKWMERIHLAVSERPFPPHIQLPPEIQESQEVTLTCLLAFSCY-GYPIQLQWLLEGVPMRQAAVTSRSELKFSPQWSHHGKIVTCQLQDADGKFLSADTVQLNVK-------------HTPKLEIKVTPSDAIVREGDSVTMTCEVSSNPEYTVSWLKDGTSLKK---QNTFTLNLREVTKDQSGKYCCQVSNDVGPGRSEVFLQVQ-------------------------------------------------------------------------------------------------------------------- |
10 | 5lf5A | 0.18 | 0.15 | 4.89 | 0.61 | CEthreader | | ----------------------------GHWGAWMPSTISAFEGTCVSIPCRFDFPDLRPAVVHGVWYFNSNYPPVVFKSRTQVVHESFQGRSRLLGDLGLRNCTLLLSTLSPELGGKYYFRGDLGGYNQYTFSEHSVLDIVYPPVIVEMNSSVEAIEGSHVSLLCGADS----NPPPLLTWMRDGMVL-REAVAKSLYLDLEEVTPGEDGVYACLAENA--YGQDNRTVELSVMYAPWKPTVNGT---------------VVAVEGETVSILCSTQSNPDPILTIFKEKQILATVIYESQLQLELPAVTPEDDGEYWCVAENQYGQRATAFNLSVEFAPIILLESHCAAARDTVQCLCVVKSNPEPSVAFELPSTVNETEREFVYSERSGLLLTSILTIRGQAQAPPRVICTSRNLYGTQSLELPFQGA----------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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