>O43688 (288 residues) MQRRWVFVLLDVLCLLVASLPFAILTLVNAPYKRGFYCGDDSIRYPYRPDTITHGLMAGV TITATVILVSAGEAYLVYTDRLYSRSDFNNYVAAVYKVLGTFLFGAAVSQSLTDLAKYMI GRLRPNFLAVCDPDWSRVNCSVYVQLEKVCRGNPADVTEARLSFYSGHSSFGMYCMVFLA LYVQARLCWKWARLLRPTVQFFLVAFALYVGYTRVSDYKHHWSDVLVGLLQGALVAALTV CYISDFFKARPPQHCLKEEELERKPSLSLTLTLGEADHNHYGYPHSSS |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | MQRRWVFVLLDVLCLLVASLPFAILTLVNAPYKRGFYCGDDSIRYPYRPDTITHGLMAGVTITATVILVSAGEAYLVYTDRLYSRSDFNNYVAAVYKVLGTFLFGAAVSQSLTDLAKYMIGRLRPNFLAVCDPDWSRVNCSVYVQLEKVCRGNPADVTEARLSFYSGHSSFGMYCMVFLALYVQARLCWKWARLLRPTVQFFLVAFALYVGYTRVSDYKHHWSDVLVGLLQGALVAALTVCYISDFFKARPPQHCLKEEELERKPSLSLTLTLGEADHNHYGYPHSSS |
Prediction | CCCSSHHHHHHHHHHHHHHHHHHHHHHCCCCSSCCCCCCCCCCCCCCCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC |
Confidence | 980331588999999999999999984368710564589812228899982454799999999999999999999988877642323446899999999999999999999999999998486998411028876555566533322673588777640356778843368999999999999865123312699999999999999999878765276578999999999999999999997413556776446776544578887766677766678888999999 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | MQRRWVFVLLDVLCLLVASLPFAILTLVNAPYKRGFYCGDDSIRYPYRPDTITHGLMAGVTITATVILVSAGEAYLVYTDRLYSRSDFNNYVAAVYKVLGTFLFGAAVSQSLTDLAKYMIGRLRPNFLAVCDPDWSRVNCSVYVQLEKVCRGNPADVTEARLSFYSGHSSFGMYCMVFLALYVQARLCWKWARLLRPTVQFFLVAFALYVGYTRVSDYKHHWSDVLVGLLQGALVAALTVCYISDFFKARPPQHCLKEEELERKPSLSLTLTLGEADHNHYGYPHSSS |
Prediction | 653312110112201222233313112114023110204141032013542112021223011213332000000121122222323033121201200131020000010102101310142002022313142321323323222201323343044333212010000000000000110223132330200101002101220121010001143000000100122033102201110130154344654465663554343635354454543346463568 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
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SS Seq | CCCSSHHHHHHHHHHHHHHHHHHHHHHCCCCSSCCCCCCCCCCCCCCCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MQRRWVFVLLDVLCLLVASLPFAILTLVNAPYKRGFYCGDDSIRYPYRPDTITHGLMAGVTITATVILVSAGEAYLVYTDRLYSRSDFNNYVAAVYKVLGTFLFGAAVSQSLTDLAKYMIGRLRPNFLAVCDPDWSRVNCSVYVQLEKVCRGNPADVTEARLSFYSGHSSFGMYCMVFLALYVQARLCWKWARLLRPTVQFFLVAFALYVGYTRVSDYKHHWSDVLVGLLQGALVAALTVCYISDFFKARPPQHCLKEEELERKPSLSLTLTLGEADHNHYGYPHSSS | |||||||||||||||||||
1 | 1iduA | 0.11 | 0.08 | 2.99 | 1.00 | DEthreader | YFSICPTVGDVADVFFALLND-PRGASQEYNPTPGRYGTYDAVRAIGGAQLAYDGGTPPRFYNQIVRRIAVTY-KKEEDLA-----NSEVNNADFARLFALVDVACTDAGIFSWKEKWEFEFWRPLSGVRD-D-GR--------P----------PFKPPFPAYPSGHATFGGAVFQMVRRYYNGRV----GTW-PDNIADSAWELMFENAISRIFLGVHWRFDAAGGVPLGIEIADEIFNNGLK------------------------------------------- | |||||||||||||
2 | 5jkiA | 0.20 | 0.13 | 4.24 | 1.64 | SPARKS-K | ----------MYKPVSLFLFFLILAAAIHT--------NDEAISKAAVLIRQLNEVMTGITHLGASSFLLPLIVIIGAGMFFYRKTW----------DGLLMLLVFGTDRLLNKVLKEWIERVRP--------------------------DFAPLVHESSFSFPSGHSMNAACVYPVIAYFLVKHL--PFLSKHKKMVYIIAGVIAVLVGISRVYLGVHFVTDVLGGFSLGLLLFFLVKGFDEKIKRFR-------------------------------------- | |||||||||||||
3 | 1iduA | 0.11 | 0.09 | 3.35 | 0.97 | MapAlign | TNYILFWNHVGLELNRVTHTVARAGDAVRVAIAMGGAQALNSTKRQGLYWAYDGSNLIGTPPRFYNQIVRRIAVTYK---KEEDLANSEVNNADFARLFALVDVACTDAGIFSWKEKWEFEFWRPLSG-VRDDGRPDH----------GDPTNDIPFKPPFPAYPSGHATFGGAVFQMVRRYYNGRVGTWKDDEPD-NIFDSAWELMFENAISRIFLGVHWRFDAAGGVPLGIEIADEIFNNLKPTPPEIQP------------------------------------ | |||||||||||||
4 | 5jkiA | 0.20 | 0.14 | 4.54 | 0.69 | CEthreader | ----MYKPVSLFLFFLILAAAIHTNAVQSADEAISKAAVLIRQPWLNEVMTGITHLGASSFLLPLIVIIGAGMFFYRKTW-----------------DGLLMLLVFGTDRLLNKVLKEWIERVRPDFAPL--------------------------VHESSFSFPSGHSMNAACVYPVIAYFLVKH--LPFLSKHKKMVYIIAGVIAVLVGISRVYLGVHFVTDVLGGFSLGLLLFFLVKGFDEKIKRFR-------------------------------------- | |||||||||||||
5 | 5jkiA | 0.23 | 0.16 | 4.91 | 1.12 | MUSTER | -------MYKPVSLFLFFLILAAAITNAVQSADEAISKAAVLIRQPWLNEVMTGITHLGASSFLLPLIVIIGAGMFFYRKT---------------WDGLLMLLVFGTDRLLNKVLKEWIERVRPDF-------APLVHESSF-------------------SFPSGHSMNAACVYPVIAYFLVKHLPFLSK--HKKMVYIIAGVIAVLVGISRVYLGVHFVTDVLGGFSLGLLLFFLVKGFDEKIKRFR-------------------------------------- | |||||||||||||
6 | 5jkiA | 0.21 | 0.14 | 4.51 | 3.64 | HHsearch | -------MYKPVSLFLFFLILA-AA--IHTN---AVQSADEAISKAAVLIPWLNEVMTGITHLLPLIVIIGAGMF--FYRKTW--------------DGLLMLLVFGTDRLLNKVLKEWIERVRPDFAP--------------------------LVHESSFSFPSGHSMNAACVYPVIAYFLVKHLPFL--SKHKKMVYIIAGVIAVLVGISRVYLGVHFVTDVLGGFSLGLLLFFLVKGFDEKIKRFR-------------------------------------- | |||||||||||||
7 | 5jkiA | 0.18 | 0.12 | 4.06 | 1.55 | FFAS-3D | -----------YKPVSLFLFFLILAAAIHTNAVQSA---DEAISKLIRQPWLNEVMTGITHLGASSFLLPLIVIIGAGMFFYRKTW-----------DGLLMLLVFGTDRLLNKVLKEWIERVRPDFAPLVHESS--------------------------FSFPSGHSMNAACVYPVIAYFLVKHLPFLSKH--KKMVYIIAGVIAVLVGISRVYLGVHFVTDVLGGFSLGLLLFFLVKGFDEKIKRFR-------------------------------------- | |||||||||||||
8 | 5lpcA | 0.11 | 0.08 | 2.90 | 0.97 | EigenThreader | A---------------------------TPCKDFMTNFETWLDVRGLETYVDADRDLATYVHYDAYLNACLILLGMGAPFDPGIPFG-------GPQILTLVCEAATRGLKAVRFQKFNVHRRLRPEALGGLVDRYKHDRSGDPSSAGDNYFLP-----MAPSYGAGHATVAGACVTMLKAFFD--HGWCPLT-----VEGELNKIAANISIGRDWAGVHYFTDYIESLRLGEKIAIGILEEQKLTYGENFTMYDGGSI----------------------------- | |||||||||||||
9 | 5gpjA | 0.10 | 0.08 | 2.93 | 1.21 | CNFpred | ATAIFSTVSFLLGGVTSLVSGFLGMKIATYANARTTLEARKGVGKAFIT--AFRSGAVMGFLLAANGLLVLYIAINLFKIYYG--DDWGGLFEAITGYGLGGSSMALFGRVGGGIYTKAADV-NPAVIADNVGDN-------------------VGDIAGMGSDLFGSYAESSCAALVVASISSFGLNHELTAMLYPLIVSSVGILVCLLTTLFATDFKEIEPALKKQLVISTVLMTIGVAVVSFVA----------------------------------------- | |||||||||||||
10 | 3w35A | 0.10 | 0.07 | 2.60 | 0.83 | DEthreader | LAPYHVGVYSAAAFNALKNDGMNFPWADYEPVNNPSHTTYKRSVDIISLKAEIM-ENKLWGIGHSSIVIANKYDQ--NNE---------MGVHGWCHWMLAHVLATFEPLIAAWHHKTRFDAVRPVTAIRHVYGNR--------------SE---LPVGDHPEYPSGSTSLCSATSQAARRYFD-----------SDELDPTWTDFTRTCATSRVWGGVHFQTTVDRTIDFGEQFGDLAHEFVQRHV-K------------------------------G-------- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |