Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| SS Seq | CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHCCCCCCCCCCSCCCCCCCCCCCCCCCCSSSCCCCCCCSSSSCCCCCC MVEEVQKHSVHTLVFRSLKRTHDMFVADNGKPVPLDEESHKRKMAIKLRNEYGPVLHMPTSKENLKEKGPQNATDSYVHKQYPANQGQEVEYFVAGTHPYPPGPGVALTADTKIQRMPSESAAQSLAVALPLQTKADANRTAPSGSEYRHPGASDRPQPTAMNSIVMETGNTKNSALMAKKAPT |
1 | 5ydaA | 0.08 | 0.08 | 3.05 | 0.57 | CEthreader | | RENDVYRDTVDRCAAVLRPALGSDLRTALFEEVEPGSTAAFMALFVTEYALARTLMEEGVRAACLAGVMEIDEALPVVAERIRLIASSGGATVSLAAVNSPVACTVAGDTPAAAHSHVLDPILESFAGHLRTLTLRPPRIPYVTNVTGDWADGIAALWERERPVLVEIGPGDSLTKLARARLDG |
2 | 3lpzA | 0.04 | 0.04 | 2.02 | 0.57 | EigenThreader | | ERIIARLQRRIAEGEEQYEAAQETRLVAARYSKQGNWAAAVDILASVSQTLLRSRLFQPGEPVRKRFVKEMIDWSKKFGDYPAGDPELHHVVGTLYVEEGEFEAAEKHLVLGT--KESPEVLARMEPLYCARAVLPYLLVANVRAANTAYRIFTSALVEDNKGLTVQNIGSAELRIFPSLPLLN |
3 | 3p8cD | 0.08 | 0.08 | 2.96 | 0.46 | FFAS-3D | | IKNELECVTNISLIIRQLKYAEDIFGELFNEAHSFSFRVNSLQERVD----------RLSVSVTQLDPKEEELSLQDITMRKAFRSSTIQDQQLFDRKTLPQPPPLNIKEGLKFYTNPSDLWKEKMLQDTEDKRKEKRKQK-----QKNLDARSVLLEAIRKGIQLRKVEEQRENTILSRR--- |
4 | 2v93A2 | 0.10 | 0.09 | 3.25 | 0.94 | SPARKS-K | | --GKLVIWINGDKGYNGLAEVGKKFEKDTGIKVHPCKLEEKFPQVAATGDGPDIIF-WARFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYKLIAYPIAVVLSAGINAASP----NKELAKEFLENYLLTDEGLEAVNKDKPLGAVALKSYEEELAKDPRIAATMENAQKG----------- |
5 | 2oevA | 0.18 | 0.04 | 1.42 | 0.51 | CNFpred | | --------TVGTLSLIMLAQAQEVFFLKAT----KMKDAIIAKLANQAADYFGDAFK------------------------------------------------------------------------------------------------------------------------------- |
6 | 6kg7A4 | 0.04 | 0.03 | 1.68 | 0.83 | DEthreader | | DIHCRDMSKVIIFSYLFWFVLTIIFITG-TRISIF---CM-GYLVACFYFLLFGGDLSQLASRGAFQATIALNSISAMYNTL--------------RSEMCYFILPLIFLWAMSVPRPSRRFWMMAIVYTEVAIVVKYFFQFG------NIIGVEKEGYVLYLILAFHILKCH----------- |
7 | 1vt4I3 | 0.06 | 0.06 | 2.58 | 1.13 | MapAlign | | ---KPYICDNDPKYERLVNAILDFLPKRIALMAEDEAIFEEAHKQVQGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--- |
8 | 4k0mC | 0.12 | 0.11 | 4.04 | 0.69 | MUSTER | | TAKFDETVEVHAKLGIDPRRS----QNVRGTVSLPHGLGKQVRVLAIAKGE--KIKEAEEAGADYVGGEEIIQAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA--AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
9 | 2pffB | 0.16 | 0.16 | 5.24 | 0.67 | HHsearch | | LVGDLIKFSAET--LSELIRTTLDAEKTQGLNILEEDKDLSIPISCPLIVVTAKLLGFTPGELRSYLKGSQGAVAIAETDSWSVRKAVLFFIGVRCYEAYPNTLEDSLENNEVPSPMLSISQVNKTNSHLPAGKQVEISLVNGKNQSRRSPFHSHLLVPASDLKDLV-KNNVSFNAKIPVYDTF |
10 | 5gwoA | 0.10 | 0.09 | 3.42 | 0.49 | CEthreader | | GGAEVANYCRERIHVVLSAALARLGKNLGEMGEVDMKEHWDDVFTKCFQRVDDEVSGRV--------------TRVVNEVRSEPVTAENVGSTAVVALVCSSHVVVANCGDSRIVLCRGKEPVALSIDHKPDRKDERARIEAQGGKVIQWNGYRVFGMLAMSRSIGDRYLKPFVIPKPEVMVVP |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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