>O43422 (116 residues) SSCALNMWLAKSVPVMGVSVALGTIEEVCSFFHRSPQLLLELDNVISVLFQNSKERGKEL KEICHSQWTGRHDAFEILVELLQALVLCLDGINSDTNIRWNNYIAGRAFVLCSAVS |
Sequence |
20 40 60 80 100 | | | | | SSCALNMWLAKSVPVMGVSVALGTIEEVCSFFHRSPQLLLELDNVISVLFQNSKERGKELKEICHSQWTGRHDAFEILVELLQALVLCLDGINSDTNIRWNNYIAGRAFVLCSAVS |
Prediction | CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHC |
Confidence | 97313588887277569999999999999999019799999999999982673578999998714604788889999999999999999997418877876122058999999859 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 | | | | | SSCALNMWLAKSVPVMGVSVALGTIEEVCSFFHRSPQLLLELDNVISVLFQNSKERGKELKEICHSQWTGRHDAFEILVELLQALVLCLDGINSDTNIRWNNYIAGRAFVLCSAVS |
Prediction | 84230111004425144144014204401400441451352045105422564664254036204541353240132035214301400430375663514643354023104328 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 | | | | | | |||||||||||||
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SS Seq | CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHC SSCALNMWLAKSVPVMGVSVALGTIEEVCSFFHRSPQLLLELDNVISVLFQNSKERGKELKEICHSQWTGRHDAFEILVELLQALVLCLDGINSDTNIRWNNYIAGRAFVLCSAVS | |||||||||||||||||||
1 | 5zi1A1 | 0.10 | 0.10 | 3.79 | 0.48 | CEthreader | IIGLFTEVLRLLWPNKQNDLWESFMNEVEALINQEEAVVSKALSELEGLRNALEGYTSALEAWQRSDKLKQLLVYERFVSTENLFKFAMPSFRSVGFEGPLLTVYAQAANLHLFLL | |||||||||||||
2 | 1sj8A2 | 0.09 | 0.08 | 3.00 | 0.63 | EigenThreader | -SDTDPHFQDVLMQ--LANAVASAVLKAKSVAQRTEQVIAAATQCALSTS----QLVACTKVVAPTISVCQEQLVEAGRLVAKAVEGCVSASQ----AATEDGQLLRGVGAAATAV | |||||||||||||
3 | 4cqiA | 0.09 | 0.08 | 2.91 | 0.72 | FFAS-3D | ---------------KTLRIKVSALKRTIKDLEFAKREVERELQRLDTLCQSDPDRVPQQTKVVD----EAQMMVPHSVNRIMASVKDLSDLEKEGSTVSNEELLDLARATMAD-- | |||||||||||||
4 | 6w2wA2 | 0.09 | 0.08 | 2.98 | 0.79 | SPARKS-K | ----ENEAAKECLKARAALEAALLALLLLAKAQDAVQLATAALRAVEAACQLAKQYPNS---------DIAKKCIKAASEAAEEASKAAEEAQRHPDSQKARDEIKEASQKAEEVK | |||||||||||||
5 | 2bw3A | 0.13 | 0.11 | 3.90 | 0.72 | CNFpred | SSHLLSNVLENSFETPELNMPILACKNIVKYFKKANLQHRL---------------RSSLKSECPTRWNSTYTMLRSILDNWESVIQILSEAGETRIVHINKSIIQTMVNILDGFE | |||||||||||||
6 | 4mhcA | 0.13 | 0.11 | 3.90 | 1.00 | DEthreader | RDAY-ALLITEAMNAILLINSIKDALSLINVFYEDDAFKSLLNTL-MYD-SKTREYFFDLK---------FHDLFT-PNKTKQLIKEILIEVVNA-NI-ASGTSADYIVNVLKERF | |||||||||||||
7 | 6r9tA | 0.06 | 0.06 | 2.60 | 0.74 | MapAlign | AQNAIKKKLVQRLE-HAAKQAAASATQTIAAAQHAASTQPLLVQSCKAVAE--QIPLLVQGVSQPDSPSAQLALIAASQSFLQPGGKMVAAAKASVPTIQDQASAMQLSQCAKNLG | |||||||||||||
8 | 5cwpA1 | 0.13 | 0.12 | 4.16 | 0.65 | MUSTER | ----------MSSDEEEARELIERAKEAAERAQEAAERTPRVRELARELKRLAQEAAEEVKRDPSS--SDVNEALKLIVEAIEAAVRALEAAERTGDPEVRELARELVRLAVEAAE | |||||||||||||
9 | 2bw3A | 0.14 | 0.12 | 4.10 | 1.99 | HHsearch | SSHLLSNVLENSFETPELN-PILACKNIVKYFKKANLQHR---------------LRSSLKSECPTRWNSTYT-LRSILDNWESVIQILSEAGETQRIHINKSIIQT-VNILDGFE | |||||||||||||
10 | 1s35A | 0.05 | 0.05 | 2.39 | 0.44 | CEthreader | RVKESGEKVIQGQTDPEYLLLGQRLEGLDTGWDAQCLGFQEFQKDAKQAEAILSNQEYTLAHLEPPKFEDFLGSMENNRDKVLSPVDSGNKLVA-EGNLYSDKIKEKVQLIEDRHR | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |