Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCSSSSCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCSCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCCCCCCCCCCCCCCCCCCC PCQYSDEGQSNSATSTGSFMDIASTNTSNKSDTNMEQVPATNDTIKRLESKLLKNQAKQQSESGRLSLGASRGSSVESLPPTSEGKRMSADMSEIEARIAATTAYSKPKRGHRKTASFGNILDVPEIVISGNGQPRRRSIQDLTVTGTEPGQVSSRSSSPSVRMITTSGPTSEKPTRSHPWTPDDSTDTN |
1 | 6kawA1 | 0.09 | 0.08 | 3.25 | 0.57 | CEthreader | | PNSGNLFPKWADKLSPTAVETWLFDAMAEDGSAAFTVSFFRDGSQAPASFRAAINAAWSDGTVWSQHLVVPVSVVTSDGPDVGHGHVAGVWRTETRTTASFDVAADLSTTTVVFDAPGRITGSLTHRSLG-----YPTLPQSDREAEVAPGAYWFRPIAMANATVDLTFHIDDKTEKRMVLGPEQGAFGG |
2 | 3e2dA | 0.06 | 0.06 | 2.54 | 0.55 | EigenThreader | | FAALENQIASDMLATGADVMLSGGLDAKGDKLLGLFAYSGMDQPSLKEMTQKALNILSKDEDGFFLM-VEGGQIDWAGHSNDAGTMLHELLKFDEAIQTVYEWAKDLPKPQKRSGEAFADRDYAPN----FNFGAFSLQTPEKLAEIVNKNSEFPITNVLASKPNPYRLAQHKYLSAINDFDAFFPYNDR |
3 | 4nl6A | 0.14 | 0.13 | 4.30 | 0.35 | FFAS-3D | | ----------SSGGSGGGVPEQEDSVLFRRGTGQSDDSDIWDDTIKAYDKA--VASFKHALKNGDICETSGKPKTTPKRKPAKKNKSQKKNTA---------ASLQQWKVGDKCSAIWATIASIDFVVYTGYGNREEQNLSDLLSPICEVANNIEQNAQENENESQVSTDESENSRSPGNKSDNIKPKSA |
4 | 5jcss | 0.07 | 0.07 | 2.99 | 1.10 | SPARKS-K | | NEDHQKDSSNKIYNLNRIWNVIELEEPSEEDLTHILAQILTNLIPKLIDSYKNVKSIYMNTKFISLNKGAHTCERLDILFKNNGINKPDQLIQSSVYDSIFSEAADCFAGAIGEFKALEPIIQAIGESLDIASSRISLFLTQHVPTLENLDDSIKIGRAVLKEKLNIQKKSMNSTLFAFTNHSLRLMEQI |
5 | 1fyaA | 0.12 | 0.04 | 1.31 | 0.44 | CNFpred | | ----------------GQAKRVVITK----DTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQ--------------------ERVAKLAGGV------------------------------------------------------------------------------------------- |
6 | 6rc9A | 0.09 | 0.06 | 2.41 | 0.67 | DEthreader | | YTFSSLPAWVAQNLLLVFRGWPYALSGMVNKQTFVPRM--AVAGA-------------------------GRELVLAGT----------ILNPELLAALPDKVKYGKNEFAANEY-----------VPTTNWSHSPTLSRFS-TGFNLLDQSNIKANVQAENHTKATGMDSSKPNNSSPYLH-------- |
7 | 5jowA | 0.06 | 0.06 | 2.55 | 0.79 | MapAlign | | TIRYNDGVFYMIEPVWLEQGGIDPSLYFEDGKCFMVSNPDGYINLCEIDPMTGKQLSS---SKRIWNGTGGRYAEGPHIYKKDGWYYLLISEGGTHASGQSSPIQGTGHADLVEGTDGSWWMVCLAYRIMPGTHHTLGRETYLAPVRWDKDAWPVVNSNGHSHYDLFVRQDKDRKRSVGLRYKLGEITHY |
8 | 6fmlG | 0.09 | 0.09 | 3.56 | 0.75 | MUSTER | | SSLEGIENFTWLRFVDTSLQEAYRASHTDVFARAVDLASKQNRLGHMQIVYDEPEDKKWTPVHALFQICERENPKAVAEITTEGVLRDLMNIARVKYRELGLCRLEKAARPRASAPPIEVVCDSRSAVIERFHPAMRKALFGPTPSEIKEASFGPRPVTLYPPRALLPAPDHDKQRFTNITVPSMARFVT |
9 | 5gztB2 | 0.14 | 0.04 | 1.25 | 0.43 | HHsearch | | TYTYEKNSAQFAVSAEVTFTGAAGTWLYSVKTAKGSVT---SDT---VTGKAFV---Q------------------------------------------------------------------------------------------------------------------------------------ |
10 | 4s13A | 0.06 | 0.06 | 2.56 | 0.54 | CEthreader | | CKTHILSEEKIHLQSLPTPYLHVSDGGKYLQTYGMWILQTPDTNWSIARGMVVDDKHITGLVNEIPFALCFGVPSVPVVKCETNDLMVPATSEMVFEGTLSLTDTHLEGPFGEMHGYVFKSQGHPCPLYTVKAMSYRDNAILPVSNPGLCTDETHTLIGSLVATEAKELAIESGLPILDAFMPYEAQALW |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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