Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340
| | | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCSSSSSSSSSCCHHHHHCCCHHHHHHHHHHHHHHCCCSSSCCCCCCCCCSSSSSSCCCCCCSCCCCSCCCCCCCCCCSCCCCCCCCCCCCHCHCHHHCCCSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCCCCCCCCCCCCSCCCCCCCCSCCCCCCCCCSCCCCCCCCCCCCCSCCCCCCCCCCCCCSSCCCCCHHHHCCCCCCCCCSCCCCCCCSSCCCCCHHHHHCCCCCCCCSCCCCCCCSSCCCCCCCCSCCCSCCCCCSSCCCCCCSSCCCCCCCCSSCCCCCCCCSCCCCCCCSSCCCCCHHHSCCCCCCC MAAAVLTDRAQVSVTFDDVAVTFTKEEWGQLDLAQRTLYQEVMLENCGLLVSLGCPVPKAELICHLEHGQEPWTRKEDLSQDTCPGDKGKPKTTEPTTCEPALSEGISLQGQVTQGNSVDSQLGQAEDQDGLSEMQEGHFRPGIDPQEKSPGKMSPECDGLGTADGVCSRIGQEQVSPGDRVRSHNSCESGKDPMIQEEENNFKCSECGKVFNKKHLLAGHEKIHSGVKPYECTECGKTFIKSTHLLQHHMIHTGERPYECMECGKAFNRKSYLTQHQRIHSGEKPYKCNECGKAFTHRSNFVLHNRRHTGEKSFVCTECGQVFRHRPGFLRHYVVHSGE |
1 | 6z2wE | 0.07 | 0.05 | 2.24 | 0.83 | DEthreader | | ESSNRYLRLLSTRIPLILTLTTSND-VF--D---TLLLKLIDIFMMTLQIKNMAKILKKTYQLLSPILPTYYLKEVRKSE------------LDKKEGYKWVNLPY-SLIIIKAE---YAILNGIIEFCSIRVFYCKKWATEFKYSTTNMLRIEFLRTTPSLL-------------LYLEQCYNHQNGQLLKNLQYSLDGVLRT------ATGNLVSKIELLAQDCFNVLGKFS-----PKTTTLNSSFHSDGKISLSKY----VEIEIDREVLLQYNYIHNSFRIG--------MKLHSLYDLFNTTILDYMLK------DADLKTFFLMHCLERRLP- |
2 | 1vt4I3 | 0.10 | 0.09 | 3.53 | 1.63 | MapAlign | | RHDSTAWNASGSILNTLQQLKFY-KPYICDNDPKYERLVNAILDFLPKGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
3 | 5v3jE | 0.28 | 0.22 | 6.74 | 2.93 | MUSTER | | --------------------------------------------------------------------PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHT--DEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSHLLTHAGARRFECKDCDKVYHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT-- |
4 | 5v3jE | 0.31 | 0.25 | 7.46 | 1.61 | HHsearch | | ---------------------PHKCKECGKAFHTPSQLSHHQKLH----------------------VGEKPYK---------C------------QECGKAFPSNAQLSLHHRVH-TDEKCFE--CKECGKAFMRPSHL---LRHQRIHTGEKPHKCKECGKAFRYDTQLSHLLTHAGARRFECKDCDKVLHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT-- |
5 | 5v3jE | 0.27 | 0.21 | 6.41 | 1.37 | MapAlign | | --------------------PHKCKECGKAFTPSQLSHHQKLHVGEKPYKCQECGKAFPLSLHHRVHTDEKC-----------------------------------------------------FECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYLHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIH--- |
6 | 5v3gD | 0.42 | 0.21 | 6.14 | 0.93 | EigenThreader | | --------------------------------------------------------------------------------------------------------------------------------------------------------------PGSEKP----------YVCRECGRGFSNKSHLLRHQRTHTGEKPYVCRECGRGFRDKSHLLSHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGFSWQSVLLRHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGFRNKSHLLRH--QRTHT |
7 | 3jb9U | 0.09 | 0.09 | 3.24 | 1.32 | MapAlign | | MFCSISGETPKEPVISRVSGNVYEKRLIEQQFELRRNLTETKQELSTALYSLDAALRVISRLTKERDEAREALAKFSDNLSSKRKRTKLQPKWATDDAVSQLLQATPSTILENLETESTTSFFPSPENSSFVLCLHKDELLCLDIQSEGSALACCWLTSSKIAVATADAI---------SIFEFPVSSSGLQSVGEIDEKVNFLQAHPLLAASNITSL--AVHPDGNLFVAGLENGELRFFSGNELTKFGPHS-SPVKTLQFGWLVVTTNSDIFVSLD--ITQLLVSSDGETLYVHIYVKSRCMSQTHVSSISNLVWLNLLFSTSNGAILRLG------- |
8 | 5v3mC | 0.36 | 0.21 | 6.13 | 3.21 | CNFpred | | -------------------------------------------------------------------------------------------------------------------------------------------------HQKLHVGEKPYKCQECGKAFPSNAQLLHHRVHTDEKCFECKECGKAF-QRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGD |
9 | 5lj5t | 0.06 | 0.06 | 2.43 | 1.13 | MapAlign | | --LCAISGKVPRRPVLSPKSRTFEKSLLEQVPNLLTSLQNEWDAIMLENFKLRSTLDSLTKKLST-----------------VMYERDAAKLVAAQLLMEKNEDSKDLPKSSQQAPKWPILKNLELLQAQNYSRNIKTFPYKELNKSMYYDKWVCMCRCEDGALHFTQLKDSKTITTITTPNPRTGGE--HPAIISRGPCNRLLLLNQITILDSKKVLREIMYGHNTEYFIWARGTIGFQYEDDSQYIVHSAKSVEYSSGVSLLLALYSPDGILDVYN--LSAKIKEVKFADMVVECDQTVVVTYDIDDSGKNMIAYSNSLTIYKFWTKDEESA--LCL- |
10 | 5v3gD | 0.43 | 0.21 | 6.04 | 4.35 | SPARKS-K | | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PGSEKPYVCRECGRLRHQRTHTGEKPYVCRECGRGFRDKSHLLSHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGFSWQSVLLRHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGFRNKSHLLRHQRTHT-- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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