>O15554 (103 residues) RFRHWFVAKLYMNTHPGRLLLGLTLGLWLTTAWVLSVAERQAVNATGHLSDTLWLIPITF LTIGYGDVVPGTMWGKIVCLCTGVMGVCCTALLVAVVARKLEF |
Sequence |
20 40 60 80 100 | | | | | RFRHWFVAKLYMNTHPGRLLLGLTLGLWLTTAWVLSVAERQAVNATGHLSDTLWLIPITFLTIGYGDVVPGTMWGKIVCLCTGVMGVCCTALLVAVVARKLEF |
Prediction | CCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHSSCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC |
Confidence | 9724799999999751589999999999999999998623787778972232353222012367887333674458999999999999999999999975049 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 | | | | | RFRHWFVAKLYMNTHPGRLLLGLTLGLWLTTAWVLSVAERQAVNATGHLSDTLWLIPITFLTIGYGDVVPGTMWGKIVCLCTGVMGVCCTALLVAVVARKLEF |
Prediction | 7463321021124433332123333333333331010034355751422230310230133233333331424312220133133333332332133244267 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 | | | | | | |||||||||||||
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SS Seq | CCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHSSCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC RFRHWFVAKLYMNTHPGRLLLGLTLGLWLTTAWVLSVAERQAVNATGHLSDTLWLIPITFLTIGYGDVVPGTMWGKIVCLCTGVMGVCCTALLVAVVARKLEF | |||||||||||||||||||
1 | 6cnmA | 0.89 | 0.88 | 24.84 | 1.33 | DEthreader | KLLRSGVFVLYMNTHPGRLLLGLTLGLWLTTAWVLSVAER-QAVATGHLSDTLWLIPITFLTIGYGDVVPGTMWGKIVCLCTGVMGVCCTALLVAVVARKLEF | |||||||||||||
2 | 2r9rB3 | 0.24 | 0.23 | 7.28 | 1.92 | SPARKS-K | -SKGLQILGQTLKASELGLLIFFLFIGVILFSSAVYFAEADEDSQFPSIPDAFWWAVVSMTTVGYGDMVPTTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNY | |||||||||||||
3 | 2a0lA | 0.26 | 0.25 | 7.80 | 0.82 | MapAlign | SGEYLVRLYLVDLIIRFYHLFGAVMLTVLYGAFAIYIVEYPDPNSSIKVFDALWWAVVTATTVGYGDVVPATPIGKVIGIAVMLTGISALTLLIGTVSNMF-- | |||||||||||||
4 | 7cr0A | 0.22 | 0.22 | 7.03 | 0.64 | CEthreader | RGGTWKLLGSVVYAHELVTAWYIGFLCLILASFLVYLAEKGENDHFDTYADALWWGLITLTTIGYGDKYPQTWNGRLLAATFTLIGVSFFALPAGILGSGFAL | |||||||||||||
5 | 6cnmA | 1.00 | 1.00 | 28.00 | 1.36 | MUSTER | RFRHWFVAKLYMNTHPGRLLLGLTLGLWLTTAWVLSVAERQAVNATGHLSDTLWLIPITFLTIGYGDVVPGTMWGKIVCLCTGVMGVCCTALLVAVVARKLEF | |||||||||||||
6 | 6cnmA | 1.00 | 1.00 | 28.00 | 1.97 | HHsearch | RFRHWFVAKLYMNTHPGRLLLGLTLGLWLTTAWVLSVAERQAVNATGHLSDTLWLIPITFLTIGYGDVVPGTMWGKIVCLCTGVMGVCCTALLVAVVARKLEF | |||||||||||||
7 | 7cr0A2 | 0.22 | 0.21 | 6.74 | 1.52 | FFAS-3D | --GTWKLLGSVVYAHELVTAWYIGFLCLILASFLVYLAEKGENDHFDTYADALWWGLITLTTIGYGDKYPQTWNGRLLAATFTLIGVSFFALPAGILGSGFA- | |||||||||||||
8 | 5twvA | 0.16 | 0.16 | 5.19 | 0.88 | EigenThreader | REQGRFLQDTTLVDLKLLIFTMSFLCSWLLFAMVWWLIAFPCVTSIHSFSSAFLFSIEVQVTIGFGGRMVTCPLAILILIVQNIVGLMINAIMLGCIFMKTAQ | |||||||||||||
9 | 3rkoB | 0.11 | 0.10 | 3.53 | 0.88 | CNFpred | --YLIARTHGLFLMTEVLHLVGIVGAVTLLLAGFAALVQT-------DIKRVLAYSTMSQIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLASGSVILACHH | |||||||||||||
10 | 5k7lA | 0.14 | 0.14 | 4.66 | 1.33 | DEthreader | TW-RARKLDHYIEYAVLVLLVCVFGLAAHWMACIWYSIGDYEISLLAVYISSLYFTMTSLTSVGFGNIAPSTDIEKIFAVAIMMIGSLLYATIFGNVTTIFQQ | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |