>O15504 (210 residues) MAICQFFLQGRCRFGDRCWNEHPGARGAGGGRQQPQQQPSGNNRRGWNTTSQRYSNVIQP SSFSKSTPWGGSRDQEKPYFSSFDSGASTNRKEGFGLSENPFASLSPDEQKDEKKLLEGI VKDMEVWESSGQWMFSVYSPVKKKPNISGFTDISPEELRLEYHNFLTSNNLQSYLNSVQR LINQWRNRVNELKSLNISTKVALLSDVKDG |
Sequence |
20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | MAICQFFLQGRCRFGDRCWNEHPGARGAGGGRQQPQQQPSGNNRRGWNTTSQRYSNVIQPSSFSKSTPWGGSRDQEKPYFSSFDSGASTNRKEGFGLSENPFASLSPDEQKDEKKLLEGIVKDMEVWESSGQWMFSVYSPVKKKPNISGFTDISPEELRLEYHNFLTSNNLQSYLNSVQRLINQWRNRVNELKSLNISTKVALLSDVKDG |
Prediction | CCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCSSCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC |
Confidence | 971114332647688644543788878888777877888777777766665445666688556778876555666777666667655567766666566766544333442134567787630001346885311202456888776787657999999999999971998999999999999999999999907999999999984149 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | MAICQFFLQGRCRFGDRCWNEHPGARGAGGGRQQPQQQPSGNNRRGWNTTSQRYSNVIQPSSFSKSTPWGGSRDQEKPYFSSFDSGASTNRKEGFGLSENPFASLSPDEQKDEKKLLEGIVKDMEVWESSGQWMFSVYSPVKKKPNISGFTDISPEELRLEYHNFLTSNNLQSYLNSVQRLINQWRNRVNELKSLNISTKVALLSDVKDG |
Prediction | 442032114130311640444145464454454545444444444444444444454344453444443344454444434444444444444434444444454445454435411531355354257432110001122553440451441100100030131445632441243145115404511540472346212411441678 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCSSCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC MAICQFFLQGRCRFGDRCWNEHPGARGAGGGRQQPQQQPSGNNRRGWNTTSQRYSNVIQPSSFSKSTPWGGSRDQEKPYFSSFDSGASTNRKEGFGLSENPFASLSPDEQKDEKKLLEGIVKDMEVWESSGQWMFSVYSPVKKKPNISGFTDISPEELRLEYHNFLTSNNLQSYLNSVQRLINQWRNRVNELKSLNISTKVALLSDVKDG | |||||||||||||||||||
1 | 3bzkA | 0.04 | 0.04 | 2.16 | 0.51 | CEthreader | ATLTARVVPGKEQEGAKFSDYFEHDEPLKSAPSHRALAIFRGRNEGVLSASLKVGAPGTLHPCEVMIAERFGLSNQGRAADKWLAEVVRWTWKVKLYTHLETDLFGELRDGAEDEAISVFARNLHDLLAGPRATLGLDPGLRTGVKVAVVDATGKLLDTATVYPHAPKNQWDQTLAVLAALCAKHQVELIAIGNGTSRETDKLAGELIKK | |||||||||||||
2 | 6djsA | 0.04 | 0.04 | 2.03 | 0.57 | EigenThreader | NALQLAVGNEHLEVTELLLARIGYVRIVEAILNHPGFAITPIILAAHCQKAYKGLASPAYLSLSSEDGVLDLCRDSEEVEAILNGDLESAEPLEVHRHKASLSRVKLGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTR | |||||||||||||
3 | 5gmkR | 0.14 | 0.10 | 3.57 | 0.59 | FFAS-3D | --FCLFFAKGMCCLGPKCEYLHHIPDEEDIGKLALRTEVLDCFGREKFADYREDMGGIGSFRKKNKT-----------------------------LYVGGIDGALNSKHLKPAQIESRIRFVFSRLGESKNCGFVKF------------KYQANAEFAKEAMSANEDPDPAAQKRLQEELKLESLNMMVHLINNNTNS----------- | |||||||||||||
4 | 5cwcA | 0.07 | 0.07 | 2.70 | 0.69 | SPARKS-K | ---------SEKEELRERLVKICVENAKRKGDDTEEAREAAREAFELVREAAERAGIDSSEVLELAIRLIKECVENAQREGYDISEACRAAAEAFKRVAEAAKRAGITSSEVLELAIRLIKECVENAQREG----------YD---ISEACRAAAEAFKRVAEAAKRAGSSETLKRAIEEIRKRVEEAQREGNDISEACRQAAEEFRKKA | |||||||||||||
5 | 2oexA | 0.09 | 0.04 | 1.64 | 0.50 | CNFpred | ----------------------------------------------------------------------------------------------------------AAYNQRKADLVNRSIAQMREATTLANGVLASLNL---PAAIEDVGDTVPQSILTKSRSVIEQGGIQTVDQLIKELPELLQRNREILDESLRLLDEEEATDNDLR | |||||||||||||
6 | 5mu5A | 0.05 | 0.04 | 1.99 | 0.83 | DEthreader | ---TTALGPDHRVCLGLLLLDPGHLRVTRLMSEFR-------------RPALSSYLFSSLSGVNTGTTAALRLYANAFKS-MKDLAKV---------FR-GGEELFHDRWDR-EDWPRSIVTLLGECAQADDHLMLMLLQPPTQFFVRTLMAAMC-YD-YYVKRV---TPADRKAEFWEIIRDEFHQMIRVMTLQVEWYFDNIEAF--D- | |||||||||||||
7 | 5xevA | 0.07 | 0.07 | 2.91 | 0.87 | MapAlign | GWLVYDFQGLNATRRFFVWVPRVLHNHIEGGNWNRITQEWDAELRPFGSHAELDAALRGVVSGQRLAMEYSPNGAVPYVSRVDAGTLSADLLQAFLVWTPDDLAAHRRAAALLMRAKDDAFRLIHDRLRAHPGECVLIDLPFADVTWVGFARAAREAALELLRSRFVYGRLWELDRAARDAMGERWAPFI-LGVGDWDAVRAAGYGEQ-- | |||||||||||||
8 | 4cs7A | 0.12 | 0.10 | 3.36 | 0.67 | MUSTER | KAPCKYEVRGKCNRGSECKFNHNYWSWPDRYLLIRSNYLLNQLLR----------------NTDRADGLSIISGAGREDRTQDFVLGSTNVVQGYIDDNQSITKAAACY-SLHNIIKQLQEVEVRQARDNK---------LSDSKHVA------LHNLVLSYMEMSK--TPASLINNLKRLREKLKKLAKLIIDLSAGA----------- | |||||||||||||
9 | 4ii1A1 | 0.31 | 0.05 | 1.58 | 1.29 | HHsearch | LKPCPFFLEGKCRFKENCRFSHGQVVSLDELRP--------------------F---------------Q-------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
10 | 3nzzA | 0.08 | 0.08 | 3.14 | 0.44 | CEthreader | KSGVSLSAEQNENLRSAFSAEIWDMV------SQNISAIGDSYLGVYENVVAVYTDFYQADILSKMGGWLLPGKDGNTVKLDVTSLKNDLNSLVNKYNQINSNTVLFPAQSGSGVKV-ATEAEARQWLSELNLPNSCLKSY-GSGYVVTVDLTPLQKMVQDIDGLGAPGKEENMKTTLQTLTQKYSNANSLYDNL-VKVLSSTISSSLET | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |