Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400
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| SS Seq | CCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCSSSSHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC PGAGLPVPALFDSLLTCRTRDSLFFCLKFCTAAISYSLCKFSSQSRDTLCSCLSPGLIKKFQFLMFRLFSEARQPLSEEDVASLSWRPLHLPSADWQRAALSLWTHRTFREVLKEEDVHLTYQDWLHLELEIQPEADALSDTERQDFHQWAIHEHFLPESSASGGCDGDLQAACTILVNALMDFHQSSRSYDHSENSDLVFGGRTGNEDIISRLQEMVADLELQQDLIVPLGHTPSQEHFLFEIFRRRLQALTAAALHFAIQQVREENIRKQLKKLDCEREELLVFLFFFSLMGLLSSHLTSNSTTDLPKAFHVCAAILECLEKRKISWLALFQLTESDLRLGRLLLRVAPDQHTRLLPFAFYSLLSYFHEDAAIREEAFLHVAVDMYLKLVQLFVAGDTSTVSP |
1 | 6lhsB | 0.33 | 0.31 | 9.34 | 1.88 | SPARKS-K | | ITGVQNLEHYWENLLNLLCSDSVGVCLKLCTAAISYAFCRFSELHQDIFSGCVPPLFLRKLQYLVPRLIWETRGEVIRDDEADSPLNWNLYALAGWKEAALSLWNQNRLQGLLREKSFQVTFMDWLLWEMTLKSNNDVLCDTDRQEYQRWAVN-HYLSESSVVGGCNGDLERGCITIAEAVLQFSN---------------KSHTGLGDILCRLQELICDIVTS-------HHQKGRRHFFFAIFYQRLELISAAFLYSTVQRKKLSRMLEILDGLSSNFSMVLISLLFFSVMDIIYMFLK--DGRKHKDLLENCVHIIHCLEQKGETWVWLFQMTDEKPELGLHLHRAASDVFLNLMPFAFFWLVPSLQLEQVVQQQDFLVIALDMYHKFLRQFLLCCVPKCQK |
2 | 4xdnA | 0.09 | 0.08 | 3.23 | 1.03 | MapAlign | | EEIMRCEFLLLDLPLMRDSKFHYKIALRNCNELVQYMV---NLQDELYQN-WA-SVFQYVGVMLCIKLKQHRRVKTSFHGLLSQCREKSQWKWFLNLCYVNYLIPEDALQELRSTELHTVGPELYAWKLAMVIQLCKDGNITDHLNEFKNFFDTNGCVIKIMPRIALKVEIFYKELKNILLLLQSVSY------IVNCYDEKGNFSRKFLPKVYSTTQKLIKNIAAGGVSMNELDSRIQTYKSILEFCEFYKVWEQTLQAMKVQAVEEYTRLAQSGGTSSEVKMISLLNCYTVQAARVSRCDKQGELVEQCNKVWLQVEKLLQETDLQTILWLFSHFEPFSWNPLPCSDKQRAEYVSKLREFYSSNKFVNRFKLKKALLLQILVNYLGKCFDMCRQQGGMRKV-- |
3 | 6lhsB | 0.35 | 0.33 | 9.74 | 11.96 | HHsearch | | ITGVQNLEHYWENLLNLLCSDSVGVCLKLCTAAISYAFCRFSELHQDIFSGCVPPLFLRKLQYLVPRLIWETRGEVIRDEEADSPLNWNLYALAGWKEAALSLWNQNRLQGLLREKSFQVTFMDWLLWEMTLKSNNDVLCDTDRQEYQRWAVN-HYLSESSVVGGCNGDLERGCITIAEAVLQFSNKS--------------H-TGLGDILCRLQELICDIVT-------SHHQKGRRHFFFAIFYQRLELLSAAFLYSTVQRKKLSRMLEILDGLSSNFSMVLISLLFFSVMDIIYMFLK--DGRKHKDLLENCVHIIHCLEQKGETWVWLFQMTDEKPELGLHLHRAASDVFLNLMPFAFFWLVPSLQLEQVVQQQDFLVIALDMYHKFLQLFVHLDSHDVFT |
4 | 6lhsB | 0.35 | 0.32 | 9.67 | 3.20 | FFAS-3D | | ITGVQNLEHYWENLLNLLCSDSVGVCLKLCTAAISYAFCRFSELHQDIFSGCVPPLFLRKLQYLVPRLIWETRGEVRDDEEADSPLNWNLYALAGWKEAALSLWNQNRLQGLLREKSFQVTFMDWLLWEMTLKSNNDVLCDTDRQEYQRWAVN-HYLSESSVVGGCNGDLERGCITIAEAVLQFSNK---------------SHTGLGDILCRLQELICDIV-------TSHHQKGRRHFFFAIFYQRLELHKAAFLYSTVQRKKLSRMLEILDGLSSNFSMVLISLLFFSVMDIIYMFLKDGR--KHKDLLENCVHIIHCLEQKGETWVWLFQMTERKPELGLHLHRAASDVFLNLMPFAFFWLVPSLQLEQVVQQQDFLVIALDMYHKFLQLFVHLDSHDV-- |
5 | 4uqiA | 0.13 | 0.11 | 3.97 | 1.09 | CNFpred | | -------NNAIKNDLASRNPTFMGLALHCIANVGSREMAEAFAGEIPKILVA-MDSVKQSAALCLLRLYRTSPDLVPMGDWTSRVVHLLNDQHLGVVTAATSLITTLAQKNPEEFKTSVSLAVSRLSRIVTSASTDLQDYTYVPAPWLSVKLLRLLQCYPPP---EDPAVRGRLTECLETILNKAQEPPKSKKVQHSNA-------KNAVLFEAISLIIHHDSEPNLLVR------ACNQLGQFLQHRETNLRYLALESMCTLASSEFSHEAVKTH---IETVINALVRQRAVDLLYAMCDR------SNAQQIVAEMLSYLETADYSIREEIV-----LKVAILAEKYAYTWYVDTILNLIRIAGDYVSEEVWYRVIQIV-VQGYAAKTVFEALQAPACHENLV |
6 | 1qbkB | 0.09 | 0.07 | 2.76 | 1.09 | CNFpred | | -------LPLLKELLFHH-EWVVKESGILVLGAIAEGCMQGM-ELIPHLIQCLSALVRSITCWTLSRYAHWVVSQTYLKPLMTELLKRILDSNKRVQEAACSAFA-TLEEEAC--TELVPYLAYILDTLVFAFSK--YQHKNLLILYDAIGTLADSVGHHLN-------KPEYIQMLMPPLIQKWNMLKDEDK------------DLFPLLECLSSVATALQ--------------------SGFLPYCEPVYQRCVNLVQKTLAQAMLNNAQPDQYEAPDKDFMIVALDLLSGLAEGLG------NIEQLVNILTLMYQCMQDKMPEVRQSSFAL------LGDLTKACFQHVKPCIADFMPILGTNLNPE----FISVCNNATWAIGEISIQMGIEMQPYIPM |
7 | 6xteA | 0.08 | 0.07 | 2.80 | 1.09 | CNFpred | | ------IKSELLMIIQMETQSSMRKKVCDIAAELARNLIDNNQWGLKFLFDSVSSVGLREAALHIFWNFPGIFGNQQQHYLDVILVQCMQDEHPSIRTLSARATA-GFLQAVNDSCQNDDSVLKSLVEIADTVPKY------RPHLEATLQLSLKLCGDTS----LNNMQRQLALEVIVTLSETAAAMLR----------------HTNIVAQTIPQMLAMMVDL------------FDSNAVAGESALDRMACGLGGKLVLPMIKEHIMQMLQNP-DWKYRHAGLMALSAIGEGCHQQMEGI-QDPHPRVRYAACNAVGQMATDFPGFQKKFH-----EKVIAALLQTMEDQVQAHAAAALINFTEDCPKSLLIPLDNLVKHLHSIMVLKLQELIQKGTKLVLE |
8 | 3nowA | 0.12 | 0.10 | 3.49 | 1.09 | CNFpred | | -------VPWFMRVLDQKCVSTAQFCLQTILNALSGLKNKPDSKPDKELCTRNNREIDTLLTCLVYSITDRT-------------------ISGAARDGVIELITRNWAERLVEI-RGLCRLLDVCSELEDYKYESAMDITGSSSTIASVCLARIYENM-------YDEAKARFTDQIDEYIKDKLLAPDMES-------------KVRVTVAITALLNGPLDVGNQVVA-----GILQMILAMATTDDELQQRVACECLIAASLCEQGVDILKRLYHSKNDGIRVRALVGLCKLGSYGGAAIRPFGDGAALKLAEACRRFLIKPGKDKDIRRWA-------ADGLAYLTLDCKEKLIEDSIHALMDLARGGNQ----SCLYGVVTTFVNLCNAYE--------- |
9 | 3w3tA | 0.10 | 0.09 | 3.17 | 1.08 | CNFpred | | ------ILPIFQSGFTDASDNVKIAAVTAFVGYFKQL-------PKSEWSKLG--ILLPSLLNSLPRFLDDG----------------------KDDALASVFESLIELVELAP-KLFKDMFDQIIQFTDMVIKNKDLEPPARTTALELLTVFSENAPQMCKS--NQNYGQTLVMVTLIMMTEVSIDDDDAAEWIESDDTD-EEVTYDHARQALDRVALKLGGEY-----------LAAPLFQYLQQMIRFAAMMALSSAAEGCADVEIPKILDMVIINDPHPRVQYGCCNVLGQISTDFS------PFIQRTAHDRILPALISKLCTSRVQTHA-------AAALVNFSEFASKDILEPYLDSLLTNLLVLLQSNKLYVQEQALTTIAFIAEAAKNKFIKYYDT |
10 | 7dxjA | 0.09 | 0.07 | 2.54 | 0.83 | DEthreader | | VNHLTICENIVAQSVRNSP-EFQKLLGIAMELFLLCSDD-AESDVRMVADECLNKVIKLMNLPRLQLELY-K-----------------------E--IKKNG-APRSLRAALWR--FAELAHL-V--RP---Q----K-CRPYLVNLLLAAVPKIMAFPTIRRTAAGSAVSICQ-H--------------------------------SR-RTQYFYSWLLNVLLGLLVVLLRLVPLLQVSP-G-ERKAVTHAILYHQVLEMFILKLSRQIADIILPMLAKQQ-MHIDS-HEAL------------G-VLNTLFEL-LVDMLLRSMF--VTPNTMAS-VSTVQLWISGMSEQQHTFYCQELGTLLMCLIFITAATLFFYTLSLNLRARSMITTHP--------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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