Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400
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| SS Seq | CCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC MADRRRQRASQDTEDEESGASGSDSGGSPLRGGGSCSGSAGGGGSGSLPSQRGGRTGALHLRRVESGGAKSAEESECESEDGIEGDAVLSDYESAEDSEGEEGEYSEEENSKVELKSEANDAVNSSTKEEKGEEKPDTKSTVTGERQSGDGQESTEPVENKVGKKGPKHLDDDEDRKNPAYIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALYGYDIRSAHNPDDIKPRRIRKPRYGSPPQRDPNWNGERLNKSHRHQGLGGTLPPRTFINRNAAGTGRMSAPRNYSRSGGFKEGRAGFRPVEAGGQHGGRSGETVKHEISYRSRRLEQTSVRDPSPEADAPVLGSPEKEEAASEPPAAAPDAAPPPPDRPIEKKSYSRARRTRT |
1 | 1ve6A | 0.09 | 0.08 | 3.21 | 0.59 | CEthreader | | RIVRDVERLIAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVGRVILVRDVSKGAEQHALFKVNTSRPGEEQRLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPGFGFVSDIRGDLIAGLGFFGGGRVSLFTSN-LSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREARLV-----TVDPRDGSVEDLELPSKDFSSYRPTAITWLGYLPDGRLAVV------------------------------ARREGRSAVFIDGERVEAPQGNHGRVVLWRGKLVTSHTSLSTPPRIVSLPSGEPLLEGGLPEDLRRSIAGSRLVWVESFDGSRVPTYVLESGRAPTPGPTVVLVHGGPFAEDSDSWDTFAASLA |
2 | 2gw1A | 0.09 | 0.08 | 3.27 | 0.73 | EigenThreader | | KYDDAIKYYNWALELKEDPVFYSNLSACYVSVGDLKKVVEMSTKALELKPDYSKVLLRRASANEGLGKFADAMFDLSVLSLNGDFNDASKELMNGLSNLYKRSPESYDKADESFTKAARLFEEQLDKNNEDEKLKEKLAISLEHTGIPLGAHEDIKKAIELFPRVNSYIYMALIMADRNDSTEYYNYFDKALKLDSNNSSVYYHRGQMNFILQNYDQAGKDFDKAKELDPENIFPYIQLACLAYRENK-----FDDCETLFSEAKRKFPEAPEVPNFFAEILTDKNDFDKALKQYDLAGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKASKLDPRSEQAKIGLAQMKLQQEDIDEAITLFEESADLARTMEEKLQAITFAEAAKVQQRIRSDPVLAKKIQET------ |
3 | 2j0qI | 0.97 | 0.15 | 4.15 | 1.14 | FFAS-3D | | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------KHLDDDEDRKNPAYIPRKGLFFEHDLR------------------GQEGRWEHDKFREDEQAPKSRQELIALYGYDIRSAH-------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
4 | 5jcss | 0.09 | 0.09 | 3.42 | 1.56 | SPARKS-K | | LSKYMGCHDSHLGEQTDATYTSGDKPGTFEWRAGVLATAVKEGEKRELTIPSRGETVKAANVRINEDHQKDSSNKI--YNLNMIGMRIWNVIELEEPSEEDLTHILAQKFPILTNLIPKLIDSYKNVKSIYMNTKFLNKGAHTRVVSVRDLIKLCERLDILFKNINKPDQLIQSSVYDSIFSEAADCFAGAIGEFKALEPIIQAIGESLDIASSRISLFLTQHVPTLENLDDRAVLLKEKLNIQKKSMNSTLFAFTNHSLRQMTEPVMLAKKLTVINVSQQTYKPKTVAVPIQENFETLFNATFSLHKMLHRCFNKNQWKNVVKLWNEAYKMAQSILKITNTENENEN-AKKKKRRLNTHEKKLLLDKWADFNDSVKKFEAQSSSIENSFVFNFVEGSLVKDEVNLATADTL |
5 | 6zwmA | 0.07 | 0.05 | 1.89 | 0.67 | DEthreader | | AKAAEKGGILNDPVVMEM-SK-AIGRLLVRELAISFFIAVDPKQAIEGVAARACLLTG--------------------------------KEMDDIRYCVLLADAIVGLLLVELAQGLVATGYVEPYLELLPYHKV--SDYSTSEMLVN--NLPLDEFYPLGLKC--------------L-WLRRLLELLDSSS----------PSLRSCW-LAQAYNP---------M-A---RDLFNAAFVSCWSELNESDKGPLIAAYAKL--------I-NKLQPAAAGVEYMKH--KAWFDRRTNY--TRSLAVMMGYILGEAMEKIPFRLTLTNAMNYTCHPVELLIKQATSHLC-CYIGW------------------------------------------------------- |
6 | 2pffB | 0.12 | 0.12 | 4.27 | 1.03 | MapAlign | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGYSAMIFETIVDGKLKTEKIFKEINEHSTSYTFRSEKGLLSATQFTQPALTLMEKAAFEDLKSKGLIPADATFAGHSLGEYAA--- |
7 | 2nbiA1 | 0.13 | 0.12 | 4.12 | 1.13 | MUSTER | | -----------QPSDLNPSSQPSECADVLEECPIDECFLPYSDASRPPSCLSFGRPDCDVLPTPQNINCPRCCATECRPDNPMFT----------PSPDGSPPICSPTMLPTNQPTPPEPSSAPSDCGEVIEECPLDTCFLPTSD-------PARPPDCTAVGRPDCDVLPFPNNLGCPACCPFECSP---DNPMFTPSPDGSPPNCSPTMTPQPSTPTVITSPAPSSQPSQCAEVIEQCPIDECFLPYGDSSRPLDCTDPAVNRPDPTPQNINCPACCAFECRPDNPMFTPSPDGSPPICSPTMMPSPPSSQPSDCGEVIEECPIDACFLPKSDSARPPDVLPFPNNIGCPSCCPFECSPDNPMFTPSPDGSPPNCSPTMLPSPSPSAVTVPLTPAPSSAPTR-------- |
8 | 2j0qI | 1.00 | 0.15 | 4.28 | 6.13 | HHsearch | | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------KHLDDDEDRKNPAYIPRKGLFFEHDLRGQ------------------EGRWEHDKFREDEQAPKSRQELIALYGYDIRSAH-------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
9 | 1xfdA | 0.05 | 0.04 | 2.00 | 0.59 | CEthreader | | LIFIFENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRK-----------------------------------------------FFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCEGPGVPMVTVHNTTDKKKMFDLETNEHVKKAINDRQMPKVEYRDIEIDDYNLPMQILKPATFTD |
10 | 4rg6A | 0.05 | 0.04 | 2.09 | 0.62 | EigenThreader | | HSEEALFLLATCYYRSGKHSCTTPQCKYLLAKCCVDLSKLAEGEQILSGGVFNKQKSHDDIVTEFGDSACFTLSLLGHVYCKTDR--------LAKGSECYQKSLSLNPFLWSPFESLCEIGEKPDPDQTFKFTLQKYNCKEAINILSHLPSQIGRAYFELSEYMQAERIFSEVRRIENYRVEGMEIYSTTLWHLQKDVALSVLSKDLTDMDKNSPEAWCAAGNCFSLQREHDIAIKFFQRAIQVD------PNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHYNAWYGLGMIYYKQEKFSLAEMHFQKALDINPQSPLCKFHRASVLFANEKYKSALQELEELKQIVPKESLVYFLIGKVYKKLGQTHLALMNFSWAMDLDP----------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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