Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480
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| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCSSSSSSSCCCCSSSSHHHHHHHHHHHHHCCCSSSSCCCCCSSSSCCCCCCSSSSCCCSSSSSSSSCSSSCCCCCCCSSSSSSCCCCCSSSSSSCCCSSSSSSCCCCCSSSSSCCCCCCSSSSSSCCCCCSSSSSCCCCSSSSSSCCCCCSSSSSSCCCCCSSSSSSCCCCCSSSSCCCSSSSSSCCCCCCCSSCCCCCCCCCCCCCSSSSSSCCCCCSSSSSSCCCCSSSSSCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCSSCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCC METAPKPGKDVPPKKDKLQTKRKKPRRYWEEETVPTTAGASPGPPRNKKNRELRPQRPKNAYILKKSRISKKPQVPKKPREWKNPESQRGLSGTQDPFPGPAPVPVEVVQKFCRIDKSRKLPHSKAKTRSRLEVAEAEEEETSIKAARSELLLAEEPGFLEGEDGEDTAKICQADIVEAVDIASAAKHFDRAGRLDVMSQNPYNAVIHLGHSNGTVSLWSPAMKEPLAKILCHRGGVRAVAVDSTGTYMATSGLDHQLKIFDLRGTYQPLSTRTLPHGAGHLAFSQRGLLVAGMGDVVNIWAGQGKASPPSLEQPYLTHRLSGPVHGLQFCPFEDVLGVGHTGGITSMLVPGAGEPNFDGLESNPYRSRKQRQEWEVKALLEKVPAELICLDPRALAEVDVISLEQGKKEQIERLGYDPQAKAPFQPKPKQKGRSSTASLVKRKRKVMDEEHRDKVRQSLQQQHHKEAKAKPTGARPSALDRFVR |
1 | 5a9qA | 0.08 | 0.05 | 1.77 | 0.67 | DEthreader | | --------------------------------------------------------------------------------------------------------------------------------------------------E-DRM-YP-DLSELLMVS-SGMDMDYPLQLLSVPISSIRRV---MMGLALLTITSTDNGRIFLAGKDGCLYEVA--YQKINHSKSSSEDDILQIAIDNSRNILYTRSEKGVIQVYDLGQGQGMSASVSQIFKIVQIAVIEESQLLAVTHAGVRLYFSTCPPNTLTLVHVRLPPTEKPSKVHRALYSKGILLMAASENNDILWCVNHTPDSPVVVHDQAATLISIIYFSRIMGNIWDASQITTDLRDKELTGALIASL----------------------NCYI-----VDGISLHLQDICSK------------------------------------- |
2 | 5oqlF1 | 0.38 | 0.24 | 7.02 | 1.94 | SPARKS-K | | -----------------------------------------------------------------------------------------------KAELDRIRRYKQAQKKYGRGPRVDIK-----KLRRTLTNLENKYKTAALKAKEAEILLENQTGFLEPGELERTYKVRQDEIVKEVAVEVAQKKFELHGTPVSLTQNPYNAILHIGQQNGTVTLWSPNSTDPLVKLLAHRGPVRSLAVDREGRYMVSTGQDNKMCIWDIRNFKEAVNSYFTRAPATSVAISDTGLTAVGWGTHTTIWFNKERPVQVKVDSPYMTWGGQQVVERVRWCPFEDILGIGHNEGFSSIIVPGAGEANYDALEVNPFETKKQRQEGEVKALLNKLQPEMIALDPNFIGNL-------------------------------------------------------------------------------------- |
3 | 5a1uD | 0.10 | 0.08 | 3.03 | 0.45 | MapAlign | | ---------------------------------------------------------------------------------------KRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVAKNWVVTGADDMQIRVFNVHMFEAHMLIKLWDWDKKWSCSQVFEGHHYVMQIVINPKNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPLPIIITGSEGTVRIWHSS-------TYRLESTLNGMERVWCVASLRGSNNVALGYDEGSIIVKLGPTIPKEQRTRVAHFLEKQGFKQQALEHRFELALQLGELKIAYQLAVEAESEQKWKQLAELAISVAFMSYFLQGKLDACLELLIRTGRLPEAAFLARTYLPSQVSRVVKLWRENLSKVNQKAAESLADPTEYEN- |
4 | 5oqlF1 | 0.39 | 0.24 | 7.13 | 0.44 | CEthreader | | ----------------------------------------------------------------------------------------------------KAELDRIRRYKQAQKKYGRGPRVDIKKLRRTLTNLENKYKTAALKAKEAEILLENQTGFLEPEGLERTYKVRQDEIVKEVAVEVAQKKFELKLHPVSLTQNPYNAILHIGQQNGTVTLWSPNSTDPLVKLLAHRGPVRSLAVDREGRYMVSTGQDNKMCIWDIRNFKEAVNSYFTRAPATSVAISDTGLTAVGWGTHTTIWKGLFNKVQVKVDSPYMTWGGQQVVERVRWCPFEDILGIGHNEGFSSIIVPGAGEANYDALEVNPFETKKQRQEGEVKALLNKLQPEMIALDPNFIGNL-------------------------------------------------------------------------------------- |
5 | 5oqlF1 | 0.39 | 0.24 | 7.13 | 1.38 | MUSTER | | -------------------------------------------------------------------------------------------KAELDRIRRY----KQAQKKYGRGPRVD-----IKKLRRTLTNLENKYKTAALKAKEAEILLENQTGFLEPGELERTYKVRQDEIVKEVAVEVAQKKFELHGTPVSLTQNPYNAILHIGQQNGTVTLWSPNSTDPLVKLLAHRGPVRSLAVDREGRYMVSTGQDNKMCIWDIRNFKEAVNSYFTRAPATSVAISDTGLTAVGWGTHTTIWKGLFNKERVKVDSPYMTWGQGQVVERVRWCPFEDILGIGHNEGFSSIIVPGAGEANYDALEVNPFETKKQRQEGEVKALLNKLQPEMIALDPNFIGNL-------------------------------------------------------------------------------------- |
6 | 5oqlF1 | 0.40 | 0.24 | 7.18 | 2.08 | HHsearch | | -------------------------------------------------------------------KA-----------------------ELD-----RIRRYKQAQKKYGRGPR-----VDIKKLRRTLTNLENKYKTAALKAKEAEILLENQTGFLEPEGLERTYKVRQDEIVKEVAVEVAQKKFELHGTPVSLTQNPYNAILHIGQQNGTVTLWSPNSTDPLVKLLAHRGPVRSLAVDREGRYMVSTGQDNKMCIWDIRNF-KEVNSYFTRAPATSVAISDTGLTAVGWGTHTTIWKGLFNKERVKVDSPYMTWGGQGVVERVRWCPFEDILGIGHNEGFSSIIVPGAGEANYDALEVNPFETKKQRQEGEVKALLNKLQPEMIALDPNFIGNL-------------------------------------------------------------------------------------- |
7 | 5wlcLW | 0.44 | 0.27 | 7.90 | 1.62 | FFAS-3D | | -------------------------------------------------------------------------------------------------------------------------QTKDKKLRAGLKKIDEQYKKAVSSAAATDYLLPESNGYLEPEELEKTFKVQQSEIKSSVDVSTANKALDKAGPTMAMAQNPWNAVMHLGHSNGTVSLWSPSMPEPLVKLLSARGPVNSIAIDRSGYYMATTGADRSMKIWDIRNFKQLHSVESLPTPGTNVSISDTGLLALSRGPHVTLWKDALKLSNPHRNTPYMSHLFAGNVENLGFVPFEDLLGVGHQTGITNLIVPGAGEANYDALELNPFETKKQRQEQEVRTLLNKLPADTITLDPNSIGSVDKRSSTIRLNAKDLAQT--------------------------------------------------------------------- |
8 | 5wlcLW | 0.29 | 0.21 | 6.27 | 0.75 | EigenThreader | | --------QTKDKKLRAGLKKIDEQYKKAVSSAAATDYLLPESNGYLEPENELEKTFKVQQSEIKSSV------DVSTANKALDLSLKEFGPYETCHSQNEQYQKK--YTFIYDHEGTKQHIE---------------------------------ARHLDFYHYLLVTAGET-----------------GAGPTMAMAQNPWNAVMHLGHSNGTVSLWSPSMPEPLVKLLSARGPVNSIAIDRSGYYMATTGADRSMKIWDI--RNFKQLHSVEPTPGTNVSISDTGLLALSRGPHVTLWKDALKLSGDSKPNTPYF--AGNKVENLGFVPFEDLLGVGHQTGITNLIVPGAGEANYDALELNPFETKKQRQEQEVRTLLN----------------------------------KLPADTISVDKRSSTIRLNAKDLAQTTMDA--------------------------------------- |
9 | 6nd4W | 0.51 | 0.21 | 5.98 | 2.10 | CNFpred | | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AMAQNPWNAVMHLGHSNGTVSLWSPSMPEPLVKLLSARGPVNSIAIDRSGYYMATTGADRSMKIWDIRNF-KQLHSVESLPPGTNVSISDTGLLALSRGPHVTLWKDALKLSGDSKNTPYMSHLFANKVENLGFVPFEDLLGVGHQTGITNLIVPGAGEANYDALELNPFETKKQRQEQEVRTLLNKLPADTITLDPNS------------------------------------------------------------------------------------------ |
10 | 1kitA | 0.06 | 0.03 | 1.37 | 0.67 | DEthreader | | AGDT---------NNGSGVLT-------------------------------------------------YS-LSTNQHAQA-S-SFGW--ATQRVLPIIVEFTGRTVL--AT-GT-------------------AATE-YHKFELSFYFDGKLI------RDNIQP--EIQGDVIF--SDGGITWDTELFSDANPGPHGITLRLIYPAIVLFLNVMSIYSDNWQTGSTLPIPTLEPSEADMVELGLLLTARLDQSPRQQFLSKDWSLLENNANISTGTVDASITRFLLFTNPGRQNLGLWFSFDEGVT-WKGPIQLVNGA--SAYSDIYQLDNAIVIVETDNSNMRILRMPITLLKQ------------------------------------------------------------------------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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