Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320
| | | | | | | | | | | | | | | | |
| SS Seq | CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCCCCCHHHHHHHHHCCSSSSCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHCCCSSSSSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSSCCCCCCCCCCSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSCCSCCCCSSSSCCCCCCCCCCCCCCCCSSSSSSSSSCCCCSSSCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHCCSSSCCCSCCC MEQLRAAARLQIVLGHLGRPSAGAVVAHPTSGTISSASFHPQQFQYTLDNNVLTLEQRKFYEENGFLVIKNLVPDADIQRFRNEFEKICRKEVKPLGLTVMRDVTISKSEYAPSEKMITKVQDFQEDKELFRYCTLPEILKYVECFTGPNIMAMHTMLINKPPDSGKKTSRHPLHQDLHYFPFRPSDLIVCAWTAMEHISRNNGCLVVLPGTHKGSLKPHDYPKWEGGVNKMFHGIQDYEENKARVHLVMEKGDTVFFHPLLIHGSGQNKTQGFRKAISCHFASADCHYIDVKGTSQENIEKEVVGIAHKFFGAENSVNLKDIWMFRARLVKGERTNL |
1 | 4mhrA | 0.13 | 0.10 | 3.47 | 1.17 | DEthreader | | ----------------------------DA---EM-RPRL-PVVHSWTNDAPISARQAAAFDRDGYIVLEDIFSADEVAFLQKAAGNLLADPAAL-DADTIVT-EPQS-N------EIRSIFEIAQSPVMARLAADARLADVARFLLGDEVYIHQSRLNYKPGFK---GREFYWHSDFETWDGMPRMRALSMSVLLAENTPHNGPLMVIPGSHRT-YLTCVG-----------VPDESLAELAGIVAPTGKPGTVILFDCNLMHGSNGNITPFPRANAFLVYNAVSNRLEKPFGVER--------------------------PWFLARREPA-ALRV |
2 | 2a1xA | 0.97 | 0.72 | 20.32 | 2.12 | SPARKS-K | | ------------------------------------------QFQYTLDNL--TLEQRKFYEENGFLVIKNLVPDADIQRFRNEFEKICRKEVKPLGLTVMRDVTISKSE-----KMITKVQDFQEDKELFRYCTLPEILKYVECFTGPNIMAMHTMLINKPPDP--------LHQDLHYFPFRPSDLIVCAWTAMEHISRNNGCLVVLPGTHKGSLKPHDYHGIQDE------------ENKARVHLVMEKGDTVFFHPLLIHGSGQNKTQGFRKAISCHFASADCHYIDVKGTSQENIEK----------------NLKDIWMFRARLVKGERTNL |
3 | 5epaA | 0.20 | 0.15 | 4.73 | 0.97 | MapAlign | | ----------------------------------------------GGPTTALSKEAVRFYREQGYVHIPRVLSETEVTAFRAACEEVLE----------KEGREIWG--AGEDEVQVHYVAQAWKHPELRSLVLHPEISGIALRLAGAPLRVYSSDILVKEPKR---TLPTLVHDDETGLPLNELSATLTAWIALTDVPVERGCMSYVPGSHLRAREDRQEHMTSFAEFRDLAVWPDYP-WQPRVAVPVRAGDVVFHHCRTVHMAEANTSDSVRMAHGVVYMDADATYRPG--------------------------VQDGHLSRLSPGDPLEGELF |
4 | 5epaA | 0.18 | 0.14 | 4.44 | 0.74 | CEthreader | | --------------------------------------------GGPTTAENLSKEAVRFYREQGYVHIPRVLSETEVTAFRAACEEVLE-----------KEGREIWGAGEDEVQVHYVAQAWQKHPELRSLVLHPEISGIALRLAGAPLRVYSSDILVKEPKRT---LPTLVHDDETGLPLNELSATLTAWIALTDVPVERGCMSYVPGSHLRAREDRQEHMTSFAEFRDLADVWPDYPWQPRVAVPVRAGDVVFHHCRTVHMAEANTSDSVRMAHGVVYMDADATYRPGVQDGHLSRLSPGDPLEGELFPLVT---------------------- |
5 | 5epaA | 0.19 | 0.14 | 4.58 | 1.41 | MUSTER | | --------------------------------------------GGPTTAENLSKEAVRFYREQGYVHIPRVLSETEVTAFRAACEEVLEKEGRE-----------IWGAGEDEVQVHYVAQAWQKHPELRSLVLHPEISGIALRLAGAPLRVYSSDILVKEPKRTLP---TLVHDDETGLPLNELSATLTAWIALTDVPVERGCMSYVPGSHLRAREDRQEHMTSFAEFRDLADVWPDYPWQPRVAVPVRAGDVVFHHCRTVHMAEANTSDSVRMAHGVVYMDADATYRPGVQDGH-------------LSRLSPGDPLEGVT-------------- |
6 | 6ec3A | 0.17 | 0.13 | 4.27 | 2.42 | HHsearch | | VREPWAKDAARV-AGIYLS-THYWGSSDGLE----TLDGYSRASLFAAAGRARLGAQIRRFREDGFVNAGPVFADDTIARLKAGAIDLISRFTEH-GHV--SD-DYWN-YVENEAPVLYRIHNLKQDWAERELLFRPELAELAAAFVGSPVVPTAFALVLKEPKRAA---GVPWHRDRANVA---PHTVCNLSICLDTAGPENGCLEGVPGSHLLPDDID--------VP------EIRDG-GPRVPVPSKVGDVIVHDVRLVHGSGPNPSDQWRRTIVIEFANPA---------------------------------------------------- |
7 | 2a1xA | 0.97 | 0.72 | 20.32 | 2.67 | FFAS-3D | | ------------------------------------------QFQYTLDN--LTLEQRKFYEENGFLVIKNLVPDADIQRFRNEFEKICRKEVKPLGLTVMRDVTI-----SKSEKMITKVQDFQEDKELFRYCTLPEILKYVECFTGPNIMAMHTMLINKPPD--------PLHQDLHYFPFRPSDLIVCAWTAMEHISRNNGCLVVLPGTHKGSLKPHDYHGIQDE------------ENKARVHLVMEKGDTVFFHPLLIHGSGQNKTQGFRKAISCHFASADCHYIDVKGTSQENIEK----------------NLKDIWMFRARLVKGERTNL |
8 | 2a1xA | 0.91 | 0.66 | 18.62 | 1.25 | EigenThreader | | ---------------------------------------------FQYTLDNLTLEQRKFYEENGFLVIKNLVPDADIQRFRNEFEKICRKEVKPLGLTVMRDVTKS-------EKMITKVQDFQEDKELFRYCTLPEILKYVECFTGPNIMAMHTMLINKPPD--------PLHQDLHYFPFSD--LIVCAWTAMEHISRNNGCLVVLPGTHKGSLKPHDYH----------GIQDEE--NKARVHLVMEKGDTVFFHPLLIHGSGQNKTQGFRKAISCHFASADCHYIDVKGTSQENIEK----------------NLKDIWMFRARLVGERTNL- |
9 | 2a1xA | 1.00 | 0.75 | 20.96 | 2.87 | CNFpred | | ------------------------------------------QFQYTLDN--LTLEQRKFYEENGFLVIKNLVPDADIQRFRNEFEKICRKEVKPLGLTVMRDVTISK-----SEKMITKVQDFQEDKELFRYCTLPEILKYVECFTGPNIMAMHTMLINKPPD--------PLHQDLHYFPFRPSDLIVCAWTAMEHISRNNGCLVVLPGTHKGSLKPHDY-----------HGIQD-EENKARVHLVMEKGDTVFFHPLLIHGSGQNKTQGFRKAISCHFASADCHYIDVKGTSQENIEK----------------NLKDIWMFRARLVKGERTNL |
10 | 2opwA | 0.16 | 0.12 | 3.85 | 1.00 | DEthreader | | --------------------------------------------------ACLSPSQLQKFQQDGFLVLEGFLSAEECVAMQQRIGEIVAEM-DVPLYFIRFFFEKGVFNFLVPKSINKIGHALAHDPVFKSITHSFKVQTLARSLGLQMPVVVQSMYIFKQPHF---GGEVSPHQDASFLYTEPLGRVLGVWIAVEDATLENGCLWFIPGSHT-SGVSRRMV----PGTSFLGSEPARDN-SLFVPTPVQRGALVLIHGEVVHKSKQNLSDRSRQAYTFHLMEASTTWSPEN-W-L--------------------------QPTAELPFPQ--LYT |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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