Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340
| | | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCSSSCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHHHHHHHHHHCHCCHHHHHHHHHHHHHHHHHHHCCC MAQSRDGGNPFAEPSELDNPFQDPAVIQHRPSRQYATLDVYNPFETREPPPAYEPPAPAPLPPPSAPSLQPSRKLSPTEPKNYGSYSTQASAAAATAELLKKQEELNRKAEELDRRERELQHAALGGTATRQNNWPPLPSFCPVQPCFFQDISMEIPQEFQKTVSTMYYLWMCSTLALLLNFLACLASFCVETNNGAGFGLSILWVLLFTPCSFVCWYRPMYKAFRSDSSFNFFVFFFIFFVQDVLFVLQAIGIPGWGFSGWISALVVPKGNTAVSVLMLLVALLFTGIAVLGIVMLKRIHSLYRRTGASFQKAQQEFAAGVFSNPAVRTAAANAAAGAAENAFRAP |
1 | 5doqA | 0.05 | 0.05 | 2.48 | 0.57 | CEthreader | | YDPVLLSRILTELTLTVHIIYATIGVGVPLMIAIAQWVGIRKNDMHYILLARRWTRGFVITVAVGVVTGTAIGLQLSLLWPNFMQLAGQVISLPLFMETFAFFFEAIFLGIYLYTWDRFENQKKHLLLLIPVAIGSSASAMFITMVFELKNGELVNIDPIVAMFNPAMPTKVAHVLATSYMTSAFVLASIAAHLTMKTAFIFSVASALVGDLSGKFLALILFGTLEEDNEVKYARPPLYIHYLFDVMVTIGVFLMVVAAVYWLGSITAKNWFFGLLVAGGPLAMIAIEAGWYLAEVGRQPWILRGYMKTAEGATTSAHVDTMLVLFCLLYIVLVIASATVLIRMFRR |
2 | 6v3fA | 0.07 | 0.07 | 2.71 | 0.75 | EigenThreader | | LQDICYAPLNPYNTSLSDCCFQNNRTLLMLTWKDHFLYCANAPLTFKDGTSLALSCMADYGAPVFPFLAYQGTDYSEAENYPADDPRMAQAKLWEEAFLKEMESFQRNTPVFAVSYIIVFLYISLALGSYSRCS----------------------RVAVESKATLGLGGVIVVLGAVLAAMGFYSYLG--VPSSLVIIQVVPFLVLAVGADNIFIFVLEYQRLPRMPGEQREAHIGRTLGSVAPSMLLCSLS-----EAICFFLGALTPAVRTFALTSGLAIILDFLLQMFVALLSLDSKRQEAGLLLRFFRKIYAPFLLHRFIRPVVMLLFLTLFGANLYLMCNI |
3 | 5cwqA | 0.13 | 0.07 | 2.61 | 0.87 | FFAS-3D | | ------------------------------------------------------------------------------------------------EELERESEEAERRLQEARKRSEEARERGD-----------------------LKELAEALIEEARAVQELARVACASEKAQRVLEEARKVSEEAREQGDDEVLALALIAIALAVLALAEV---ACCRGNSEEAERA-----SEKAQRVLEEARKVS-----------EEAREQGDDEVLALALIAIALAVLALAEVACCEAERAYEDARRVEEEARKVKE--SAEEQGDSEVKRLAEEAEQLAREARRH-- |
4 | 6xnsA | 0.08 | 0.06 | 2.55 | 0.97 | SPARKS-K | | ---------------------------DRSDHAKKLKTFLENLRRHLDRLDKHIKQLRDILSENPEDERVKDVIDLSERSVRIVKTVIKIFEDSVRKLLKQINKEAEELAKDLKRAVELAEAVVRADPGSN------------------------LSKKALEIILRAAAELAKLPDALAAAARAASKVQQEQPGSNLAKAAQEIMRQASRAAEEAARRATLEKAEKDDPETALKAVETVVKVARALNQIATMAGSAARLAERVLELAEQEKVLDILLDILEQILQTATKIIDDANKLLEKLRRSERKDKVVETYVELLKRHERLVKQLLEIAKAHAEAVEGGS---- |
5 | 5gpjA | 0.08 | 0.05 | 2.06 | 1.12 | CNFpred | | ---------------------------------------------------------------------------------------------ATAIFSTVSFLLGGVTSLVSGFLGMKI----------------------ATYANARTTLEA-GVGKAFITAFRSGAVMGFLLAANGLLVLYIAINLFKLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGA-RNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGLNHELTAMLYPLIVSSVGILVCLLTTLFATDFF--EIKAVKEIEPALKKQLVSTVLMTIGVAVVSFVALPTSFTIF |
6 | 3c3lA | 0.04 | 0.03 | 1.45 | 0.67 | DEthreader | | -----------------------------------------------------------AQGEQTFKYELQVLLLLDFDPI-S----TPMVQFYETLGILMLVLNTALGDRKS--LFLPDINLGENGALELKIAKNLSVTIMLQMLFVEPLRNGITQT-VGESLVYSTEQLQKATQIQSVVLEDMFKQRVQEKLDIQASLNLPMYIAGAVAGIPFMTIGTGD-----ANEAVYTSWGNPIKNVYESYAKFMK------N-VD-FS--K---SPEALATVDDIANAASLIERNLRNIALGVDIRHKV-LDKVNLSIYQNNG--------------------------- |
7 | 5doqA | 0.08 | 0.06 | 2.30 | 0.82 | MapAlign | | -------------------------------------------------------------------------------------DPVLLSRILTELTLTVHIIYATIGVGVPLMIAIAQWVGIRKNDMHYIGFVITVAVGVVTGTAIGLQLS-LLWPNFMQLAGQVISLPLFMETFAFFFEAIFLGIYLENQKKHLLLLIPVAIGSSASAMFITMFMNTPQGFLVNIDPIVAMFNAMPTKVAHVLATSYMT----SAFVLASIAAWHLIYHRKALHLTMKTAFIFSVASALVGDLSGKFLAEYQLMVVAAVYWLGSIFRWKWTAKNWFFGLLVAGGPLAMIAIEAG |
8 | 4ea3B | 0.10 | 0.08 | 3.12 | 0.58 | MUSTER | | -----------------------------LEDNWETLNDNLKVIEKADNAAQVKDALTKMRAAALDAQKATPPKLEDKSPDSPEMKDFRHGFDILVGQIDDALKLANEKVKEAQAAAEQLKTTRNAYIQKYLPLGTKMKTPFQGTDILLGFWP--FGNALCKTVIAIDYYNMFTSTFTLTAMSVDRYVAICHPIQAVNVAIWALASVVGVPVAIMGSIECLVEIPTPQDYWGPVFAICIFLFSFIVPVLVIS----VCYSLMIRRLKDRNLRRITRLVLVVVAVFVGCWTPVQVFVLAQGLGVQPSSETAVAILRFCTALGYVLDENFKACFRKF------------ |
9 | 2kogA | 0.11 | 0.03 | 1.26 | 0.65 | HHsearch | | ---------------------------------------MSATAATVPPA---------------APAGEG------GPPAPPPNLTSNRRLQQTQAQVDEVVDIMRVNVDKVLERDQKLSEL-----DDRADA--------------LQAGASQFETSAAKLKRKYWWMMIILGVICAIILIIIIVYFST------------------------------------------------------------------------------------------------------------------------------------------------------------ |
10 | 4or2A2 | 0.03 | 0.02 | 1.30 | 0.51 | CEthreader | | -----------------------------------------------------------------------------------------VRYLEWSNIESIIAIAFSCLGILVTLFVTLIFVLYRDTPVVKSSSRELYIILAGIFLGYVCPFTLIAKPTTTSCYLQRLLVGLSSAMCYSALVTKTNRIARIRFMSAWAQVIIASILISVQLTLVVTLIIMEPPMPILSVYLICNTSNLGVVAPLGYNGLLIMSCTYYAFKTR-NVPANFNEAKYIAFTMYTTCIIWLAFVPIYFGSNYKIITTCFVTVALGCMFTPKMYIIIAKPE--------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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