Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140
| | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSCCCSSSSSSSSSSCCCCCCCCSSSSSSSSSSSSCCCCSSSSSSSCCCCCCCCCCCCCCCCSSSSCCCCSSSSSSSSSSSSCCCCCSSSSSSSSCCCCCCC CSGMLGMVSGLISDSQITSSNQGDRNWMPENIRLVTSRSGWALPPAPHSYINEWLQIDLGEEKIVRGIIIQGGKHRENKVFMRKFKIGYSNNGSDWKMIMDDSKRKAKSFEGNNNYDTPELRTFPALSTRFIRIYPERATHGGLGLRMELLGCEVEAP |
1 | 2qqmA | 0.95 | 0.94 | 26.27 | 1.33 | DEthreader | | KCGMLGMVSGLISDSQITSSNQGDRNWMPENIRLVTSRSGWALPPA-PHSYIEWLQIDLGEEKIVRGIIIQGGKHRENKVFMRKFKIGYSNNGSDWKMIMDDSKRKAKSFEGNNNYDTPELRTFPALSTRFIRIYPERATHGGLGLRMELLGCEVE-- |
2 | 2qqmA3 | 1.00 | 0.99 | 27.65 | 2.28 | SPARKS-K | | CSGMLGMVSGLISDSQITSSNQGDRNWMPENIRLVTSRSGWALPPAPHSYINEWLQIDLGEEKIVRGIIIQGGKHRENKVFMRKFKIGYSNNGSDWKMIMDDSKRKAKSFEGNNNYDTPELRTFPALSTRFIRIYPERATHGGLGLRMELLGCEVE-- |
3 | 2wuhA | 0.29 | 0.28 | 8.49 | 0.68 | MapAlign | | CRYPLGMSGGQIPDEDITASSQWSESTAAKYGRLDSEDGAWCPEPVEPDDLKEFLQIDLHTLHFITLVGTQGRHAGGHGEFAPMYKINYSRDGTRWISWR--NRHGKQVLDGNSNPYDIFLKDLPPIVARFVRFIPVTDHSMNVCMRVELYGCVW--- |
4 | 4ag4A1 | 0.25 | 0.25 | 7.63 | 0.54 | CEthreader | | CRYALGMQDRTIPDSDISASSSWSDSTAARHSRSSDGDGAWCPAGSVFPKEEEYLQVDLQRLHLVALVGTQGRHAGLGKEFSRSYRLRYSRDGRRWMGWK--DRWGQEVISGNEDPEGVVLKDLGPMVARLVRFYPRADRVMSVCLRVELYGCLW--- |
5 | 2qqmA3 | 1.00 | 0.99 | 27.65 | 2.24 | MUSTER | | CSGMLGMVSGLISDSQITSSNQGDRNWMPENIRLVTSRSGWALPPAPHSYINEWLQIDLGEEKIVRGIIIQGGKHRENKVFMRKFKIGYSNNGSDWKMIMDDSKRKAKSFEGNNNYDTPELRTFPALSTRFIRIYPERATHGGLGLRMELLGCEVE-- |
6 | 1sddB | 0.38 | 0.37 | 10.87 | 1.75 | HHsearch | | CSTPLGMESGKIENKQITASSFKKSYWEPFLARLNAQVNAWQAK---ANNNNQWLQIDLLKIKKITAIVTQGCKSLSSEMYVKSYTIHYSDQGTDWKPYREKSSMVDKIFEGNNNVRGHVKNFFPPIISRFIRIIPK-TWNQSIALRLELFGCDM--- |
7 | 2qqmA3 | 1.00 | 0.99 | 27.65 | 2.78 | FFAS-3D | | CSGMLGMVSGLISDSQITSSNQGDRNWMPENIRLVTSRSGWALPPAPHSYINEWLQIDLGEEKIVRGIIIQGGKHRENKVFMRKFKIGYSNNGSDWKMIMDDSKRKAKSFEGNNNYDTPELRTFPALSTRFIRIYPERATHGGLGLRMELLGCEVE-- |
8 | 7k66A3 | 0.32 | 0.31 | 9.33 | 1.05 | EigenThreader | | CQTPLGMASGHIRDFQITASGQYG-QWAPKLARLHYSINAWSTK-----EPFSWIKVDLLAPMIIHGIKTQGARQKFSSLYISQFIIMYSLDGKKWQTYRGNSTGTLMVFFGNVDSSGIKHNIFNPIIARYIRLHPTHYS-IRSTLRMELMGCDLNSC |
9 | 2qqmA | 1.00 | 0.99 | 27.65 | 2.73 | CNFpred | | CSGMLGMVSGLISDSQITSSNQGDRNWMPENIRLVTSRSGWALPPAPHSYINEWLQIDLGEEKIVRGIIIQGGKHRENKVFMRKFKIGYSNNGSDWKMIMDDSKRKAKSFEGNNNYDTPELRTFPALSTRFIRIYPERATHGGLGLRMELLGCEVE-- |
10 | 1sddB | 0.33 | 0.32 | 9.51 | 1.33 | DEthreader | | CKMPMGLSTGLIADSQIQASEFWG-YWEPKLARLNNGGNAWIAEK---LSTEPWIQVDMQKEVLLTGIQTQGAKHYLKPYYTTEFCVAYSLDRKNWRIFKGNSTRNVMYFGGNSDASTIKENQIPPVVARYIRISPTGSY-NKPALRLELQGCEVNGP |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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