Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCSSSSCSCCCCCCCCCCCCCCCCCCSCCCCCCCCCSSSSCCCCSSSSSSSSSSCCCCCCCCCSSSSSSSSSSSSSCCCCSSSSSCCCCCCCCCCCCCCCCCSSSSCCCCSSSSSSSSSSSSCCCCSSSSSSSSCCCCCCCC SEDFKCMEALGMESGEIHSDQITASSQYSTNWSAERSRLNYPENGWTPGEDSYREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKIDVSSNGEDWITIKEGNKPVLFQGNTNPTDVVVAVFPKPLITRFVRIKPATWETGISMRFEVYGCKITDYP |
1 | 2qqoA | 0.50 | 0.48 | 13.88 | 1.50 | DEthreader | | ----QCNVPLGMESGRIANEQISASSTYDGRWTPQQSRLHGDDNGWTPNLDSNKEYLQVDLRFLTMLTAIATQGAISRQNG--YYVKSYKLEVSTNGEDWMVYRHGKNHKVFQANNDATEVVLNKLHAPLLTRFVRIRPQTWHSGIALRLELFGCRVTASL |
2 | 2qqmA2 | 1.00 | 0.98 | 27.30 | 2.29 | SPARKS-K | | ---FKCMEALGMESGEIHSDQITASSQYSTNWSAERSRLNYPENGWTPGEDSYREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKIDVSSNGEDWITIKEGNKPVLFQGNTNPTDVVVAVFPKPLITRFVRIKPATWETGISMRFEVYGCKITDY- |
3 | 2wuhA | 0.36 | 0.34 | 10.17 | 0.68 | MapAlign | | ----ICRYPLGMSGGQIPDEDITASSQWSESTAAKYGRLDSEDGAWCPEPVEPLEFLQIDLHTLHFITLVGTQGRH-AGGHGIEFAPMYKINYSRDGTRWISWRNRHGKQVLDGNSNPYDIFLKDLEPPIVARFVRFIPVTDSMNVCMRVELYGCVW---- |
4 | 2qqmA2 | 1.00 | 0.98 | 27.30 | 0.54 | CEthreader | | ---FKCMEALGMESGEIHSDQITASSQYSTNWSAERSRLNYPENGWTPGEDSYREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKIDVSSNGEDWITIKEGNKPVLFQGNTNPTDVVVAVFPKPLITRFVRIKPATWETGISMRFEVYGCKITDY- |
5 | 2qqmA2 | 1.00 | 0.98 | 27.30 | 2.32 | MUSTER | | ---FKCMEALGMESGEIHSDQITASSQYSTNWSAERSRLNYPENGWTPGEDSYREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKIDVSSNGEDWITIKEGNKPVLFQGNTNPTDVVVAVFPKPLITRFVRIKPATWETGISMRFEVYGCKITDY- |
6 | 1sddB | 0.39 | 0.38 | 11.19 | 1.76 | HHsearch | | CEVNGCSTPLGMESGKIENKQITASSFKKSYWEPFLARLNAQVNAWQAKANNNNQWLQIDLLKIKKITAIVTQGCKSL--SSEMYVKSYTIHYSDQGTDWKPYREKMVDKIFEGNNNVRGHVKNFFNPPIISRFIRIIPKTWNQSIALRLELFGCDM---- |
7 | 2qqmA2 | 1.00 | 0.98 | 27.30 | 2.63 | FFAS-3D | | ---FKCMEALGMESGEIHSDQITASSQYSTNWSAERSRLNYPENGWTPGEDSYREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKIDVSSNGEDWITIKEGNKPVLFQGNTNPTDVVVAVFPKPLITRFVRIKPATWETGISMRFEVYGCKITDY- |
8 | 7k66A3 | 0.33 | 0.31 | 9.34 | 1.05 | EigenThreader | | --SKKCQTPLGMASGHIRDFQITASGQYG-QWAPKLARLHYSINAWSTK--EPFSWIKVDLLAPMIIHGIKTQGARQK--FSSLYISQFIIMYSLDGKKWQTYRGNSTLMVFFGNVDSSGIKHNIFNPPIIARYIRLHPTHYSIRSTLRMELMGCDLNSC- |
9 | 4deqA | 0.98 | 0.97 | 27.15 | 2.79 | CNFpred | | --HMKCMEALGMESGEIHSDQITASSQYSTNWSAERSRLNYPENGWTPGEDSYREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKIDVSSNGEDWITIKEGNKPVLFQGNTNPTDVVVAVFPKPLITRFVRIKPATWETGISMRFEVYGCKITDYV |
10 | 6mf0A | 0.39 | 0.38 | 11.20 | 1.50 | DEthreader | | HDLNSCSMPLGMESKAISDAQITASSYFTATWSPSKARLHLQGNAWRPQVNNPKEWLQVDFQKTMKVTGVTTQGVKSLLTS--MYVKEFLISSSQDGHQWTLFFQNGKVKVFQGNQDSFTPVVNSLDPPLLTRYLRIHPQSWVHQIALRMEVLGCEA--Q- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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