Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| SS Seq | CCCSSCCHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCSSSSHHHHHHHHHHHHHHHHHHSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCSSSCCC MGRVFLTGEKANSILKRYPRANGFFEEIRQGNIERECKEEFCTFEEAREAFENNEKTKEFWSTYTKAQQGESNRGSDWFQFYLTFPLIFGLFIILLVIFLIWRCFLRNKTRRQTVTEGHIPFPQHLNIITPPPPPDEVFDSSGLSPGFLGYVVGRSDSVSTRLSNCDPPPTYEEATGQVNLQRSETEPHLDPPPEYEDIVNSNSASAIPMVPVVTTIK |
1 | 5vhaA2 | 0.08 | 0.08 | 3.11 | 0.44 | CEthreader | | HLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLGKEKVADARRKELAKDTKSDHLTVVNAFKGWEKAKQRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPQDPESNKKRKMVKVYTKTDGVVAIHPKSVNVEQTEFNYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDNDQETIA |
2 | 3q15A | 0.07 | 0.07 | 2.86 | 0.52 | EigenThreader | | YSLMCFRHQLMLDYEYVEAIGYYREAEKELPFVDIEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAGLSWTLCKAGQTQKAFQFIEEGLDHIVDERKIHDLLSYFEKKNLHAYIEACARSAAAVFESSCHFEQAAAFYRKVL |
3 | 1cfhA | 0.64 | 0.13 | 3.67 | 0.64 | FFAS-3D | | ---------------------SGKLEEFVQGNLERECMEEKCSFEEAREVFENTERTTEFWKQYV--------------------------------------------------------------------------------------------------------------------------------------------------------- |
4 | 4btgA | 0.10 | 0.09 | 3.39 | 0.96 | SPARKS-K | | IGNTF----AVSAFVKNRTAVYEA----VSQTVNSNGAEMTLGFPSVVERDYALDRPMVAIAALRTGIVDESLEAR--------ASNDLKRSMFNYYAAVMHYAVAHNPEVVVSEHQGVAAEQGSLYLVWNVRTELRIPGGSIRTPEPLEAIAYNKPIQPSEVLQAKVLDLANHTTSIPWHEASTEFAYED---AYSTIRNKRYTAEVKEFEGLGQRR |
5 | 5edmA | 0.34 | 0.07 | 2.20 | 0.72 | CNFpred | | --------------------ANTFLMMVRKGNLMRMCVMMTCSYMMAFMALMSSTATDVFWAKYTAC------------------------------------------------------------------------------------------------------------------------------------------------------- |
6 | 5xtcl | 0.07 | 0.04 | 1.74 | 0.83 | DEthreader | | FTALFFLFTPLLGLLILTLCLGAITTFAAVASTAYSTRMILLL-------LTALAVTFLGLLTALDLNLTKKMKSPLTFYFSNMLG-FYPSIMHRTPYLGLLTSQNLPLLLLTWLEKLPKTISQHQISTSITSTGMILYFLSFFF------------------------------------------------------------------------- |
7 | 3zfsC | 0.05 | 0.05 | 2.19 | 0.76 | MapAlign | | -EIQKLAQDGGIVTGLLAYALDEGIIE-----GAVVAGPGEEFWKPQPMVAMSSDELKAAAGTKYTSPNVMMLKKAVRQYGIEKLGTVAIPQTMGIRKMQTLADKVGIYCMENFPYTSLQTFICEKLGVSMELVEKMDIGKGKFWVYTQDDVLTLPLKETHAGCKICKDYVAELADVSTGSVGSPDGWSTVITRTDAGDSIFKQAVEAGLFET----- |
8 | 5a98A | 0.13 | 0.12 | 4.30 | 0.56 | MUSTER | | EDYTLREEIYNRQVIKRPFDPDSYLTYLKNGKTL-LFFSHEFT---WEEICRGKCDTQEYIDGLVADNGGRSTHNSSYVAFQLTLLGNFDLGSIHLRIGDYLG--FRDGQRFPCKETIHGRRDTIGPFMQGMSGKWAKEDYIHTYSGRFDCKTSRHPSANQDGHSSFAPENMRNALLYSGDKSPRYILMDNEHTLINNFIIPRCLPYRDQYGKDY--- |
9 | 1cfhA | 0.61 | 0.13 | 3.68 | 3.54 | HHsearch | | --------------------YNSKLEEFVQGNLERECMEEKCSFEEAREVFENTERTTEFWKQYVD-------------------------------------------------------------------------------------------------------------------------------------------------------- |
10 | 3zfsC | 0.04 | 0.04 | 1.98 | 0.41 | CEthreader | | -LGTYKEIVSARSTDREIQKLAQDGGIVTG--LLAYALDEGIIEGAVVAGPGEEFWKPQPMVAMSSDELKAAANVMMLKKAVRQYGIEKLGTVAIPCQTMGIRKMQTYPFGVRFTFICEKLGVSMELVEKMDIGKGKFWVYTQDDVLTLPLKETHGYEQAGCKICKDYVAELADVSTGSVGSPDGWSTVITRTDAGDSIFKQAVEAGLFETKPIEEVK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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