Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| SS Seq | CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHSSSSSSCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHSSSSSSSHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHSSSCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC MKRQNVRTLALIVCTFTYLLVGAAVFDALESEPELIERQRLELRQQELRARYNLSQGGYEELERVVLRLKPHKAGVQWRFAGSFYFAITVITTIGYGHAAPSTDGGKVFCMFYALLGIPLTLVMFQSLGERINTLVRYLLHRAKKGLGMRRADVSMANMVLIGFFSCISTLCIGAAAFSHYEHWTFFQAYYYCFITLTTIGFGDYVALQKDQALQTQPQYVAFSFVYILTGLTVIGAFLNL |
1 | 3ukmA | 0.32 | 0.28 | 8.51 | 1.17 | DEthreader | | -NS-ATMFGFLVLGYLLYLVFGAVVFSSVELPYEDLLRQELR-KL---------------RRFLEE-FVASVSVLWNWDFTSALFFASTVLSTTGYGHTVPLSDGGKAFCIIYSVIGIPFTLLFLTAVVQRITVHVTRRPVL-Y------FSKVVAIVHAVLLGFVTVSFFFIPAAVFSVLEDWNFLESFYFCFISLSTIGLGDYVPGEGYNQ-KFRELYKIGITCYLLLGLIAMLVVLET |
2 | 3ukmA | 0.33 | 0.32 | 9.48 | 2.14 | SPARKS-K | | --NSATMFGFLVLGYLLYLVFGAVVFSSVELPYEDLLRQELRKLKRRFLEEHELSEQQLEQFLGRVLEASNYSVLWNWDFTSALFFASTVLSTTGYGHTVPLSDGGKAFCIIYSVIGIPFTLLFLTAVVQRITVHVTRRP-----VLYFSKQVVAIVHAVLLGFVTVSCFFFIPAAVFSVLEDWNFLESFYFCFISLSTIGLGDYVPGEGYNQKF-RELYKIGITCYLLLGLIAMLVVLET |
3 | 3ukmA | 0.32 | 0.30 | 9.14 | 0.92 | MapAlign | | ---SATMFGFLVLGYLLYLVFGAVVFSSVELPYEDLLRQELRKLKRRFLEEECLSEQQLEQFLGRVLEASNYGVLWNWDFTSALFFASTVLSTTGYGHTVPLSDGGKAFCIIYSVIGIPFTLLFLTAVVQRITVHVTRRP------VLYFSKQVVAIVHAVLLGFVTVSFFFIPAAVFSVLEDWNFLESFYFCFISLSTIGLGDYVPGEG-YNQKFRELYKIGITCYLLLGLIAMLVVLET |
4 | 3ukmA | 0.32 | 0.31 | 9.37 | 0.77 | CEthreader | | --NSATMFGFLVLGYLLYLVFGAVVFSSVELPYEDLLRQELRKLKRRFLEEHCLSEQQLEQFLGRVLEASGVSVLWNWDFTSALFFASTVLSTTGYGHTVPLSDGGKAFCIIYSVIGIPFTLLFLTAVVQRITVHVTRRPVLY-----FSKQVVAIVHAVLLGFVTVSCFFFIPAAVFSVLEDWNFLESFYFCFISLSTIGLGDYVPGEGYNQ-KFRELYKIGITCYLLLGLIAMLVVLET |
5 | 6rv2A | 1.00 | 0.99 | 27.65 | 2.07 | MUSTER | | MKRQNVRTLALIVCTFTYLLVGAAVFDALESEPELIERQRLELRQQELRARYNLSQGGYEELERVVLRLKPHKAGVQWRFAGSFYFAITVITTIGYGHAAPSTDGGKVFCMFYALLGIPLTLVMFQSLGERINTLVRYLLHRAKKGLG---ADVSMANMVLIGFFSCISTLCIGAAAFSHYEHWTFFQAYYYCFITLTTIGFGDYVALQKDQALQTQPQYVAFSFVYILTGLTVIGAFLNL |
6 | 6rv2A | 0.99 | 0.98 | 27.32 | 3.39 | HHsearch | | MKRQNVRTLALIVCTFTYLLVGAAVFDALESEPELIERQRLELRQQELRARYNLSQGGYEELERVVLRLKPHKAGVQWRFAGSFYFAITVITTIGYGHAAPSTDGGKVFCMFYALLGIPLTLVMFQSLGERINTLVRYLLHRAKKGLGADV---SMANMVLIGFFSCISTLCIGAAAFSHYEHWTFFQAYYYCFITLTTIGFGDYVALQKDQALQTQPQYVAFSFVYILTGLTVIGAFLNL |
7 | 6rv2A | 0.99 | 0.98 | 27.43 | 2.96 | FFAS-3D | | MKRQNVRTLALIVCTFTYLLVGAAVFDALESEPELIERQRLELRQQELRARYNLSQGGYEELERVVLRLKPHKAGVQWRFAGSFYFAITVITTIGYGHAAPSTDGGKVFCMFYALLGIPLTLVMFQSLGERINTLVRYLLHRAKKGLGAD---VSMANMVLIGFFSCISTLCIGAAAFSHYEHWTFFQAYYYCFITLTTIGFGDYVALQKDQALQTQPQYVAFSFVYILTGLTVIGAFLNL |
8 | 3ukmA | 0.32 | 0.30 | 9.13 | 1.72 | EigenThreader | | --NSATMFGFLVLGYLLYLVFGAVVFSSVELPYEDLLRQELRKLKRRFLEEHECLSQLEQFLGRVLEASNYGVSVWNWDFTSALFFASTVLSTTGYGHTVPLSDGGKAFCIIYSVIGIPFTLLFLTAVVQRITVHVT---------RYFSKQVVAIVHAVLLGFVTVSCFFFIPAAVFSVLEDWNFLESFYFCFISLSTIGLGDYVPGEGYNQK-FRELYKIGITCYLLLGLIAMLVVLET |
9 | 6rv4A | 1.00 | 0.99 | 27.65 | 1.51 | CNFpred | | MKRQNVRTLALIVCTFTYLLVGAAVFDALESEPELIERQRLELRQQELRARYNLSQGGYEELERVVLRLKPHKAGVQWRFAGSFYFAITVITTIGYGHAAPSTDGGKVFCMFYALLGIPLTLVMFQSLGERINTLVRYLLHRAKKGLG---ADVSMANMVLIGFFSCISTLCIGAAAFSHYEHWTFFQAYYYCFITLTTIGFGDYVALQKDQALQTQPQYVAFSFVYILTGLTVIGAFLNL |
10 | 3um7A | 0.31 | 0.27 | 8.15 | 1.17 | DEthreader | | --MRSTTLLALLALVLLYLVSGALVFRALEQPHEQ-----E----------------K-LRA-----VDALGGADSAWDLGSAFFFSGTIITTIGYGNVALRTDAGRLFCIFYALVGIPLFGILLAGVGDRLGSSLRHGIGHIEAIFLKWHPELVRVLSAMLFLLIGCLFVLTPTFVFCYMEDWSKLEAIYFVIVTLTTVGFGDYVAGADPRQ--DSPAYQPLVWFWILLGLAYFASVLTT |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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