>O14543 (225 residues) MVTHSKFPAAGMSRPLDTSLRLKTFSSKSEYQLVVNAVRKLQESGFYWSAVTGGEANLLL SAEPAGTFLIRDSSDQRHFFTLSVKTQSGTKNLRIQCEGGSFSLQSDPRSTQPVPRFDCV LKLVHHYMPPPGAPSFPSPPTEPSSEVPEQPSAQPLPGSPPRRAYYIYSGGEKIPLVLSR PLSSNVATLQHLCRKTVNGHLDSYEKVTQLPGPIREFLDQYDAPL |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | MVTHSKFPAAGMSRPLDTSLRLKTFSSKSEYQLVVNAVRKLQESGFYWSAVTGGEANLLLSAEPAGTFLIRDSSDQRHFFTLSVKTQSGTKNLRIQCEGGSFSLQSDPRSTQPVPRFDCVLKLVHHYMPPPGAPSFPSPPTEPSSEVPEQPSAQPLPGSPPRRAYYIYSGGEKIPLVLSRPLSSNVATLQHLCRKTVNGHLDSYEKVTQLPGPIREFLDQYDAPL |
Prediction | CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCSSSSSSCCCCCCCSSSSSSSCCSSSSSSSSSSCCSSSSCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCCCCSSCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCC |
Confidence | 987567998878877788887466676045666555789886379738999999999997189997499881799998489999979946899999849968873787533477655999999999813655562333346778878888765556566652110104677533013267887898647999999999615775552348889999999759999 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | MVTHSKFPAAGMSRPLDTSLRLKTFSSKSEYQLVVNAVRKLQESGFYWSAVTGGEANLLLSAEPAGTFLIRDSSDQRHFFTLSVKTQSGTKNLRIQCEGGSFSLQSDPRSTQPVPRFDCVLKLVHHYMPPPGAPSFPSPPTEPSSEVPEQPSAQPLPGSPPRRAYYIYSGGEKIPLVLSRPLSSNVATLQHLCRKTVNGHLDSYEKVTQLPGPIREFLDQYDAPL |
Prediction | 735445245444543444544254142663153036315405736102270416303523673540000001065552100000127740200002246330202244424444441613542251234324344243434434553564444543454344433444444441313044215652430220003102430544642560253025005515178 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | | |||||||||||||
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SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCSSSSSSCCCCCCCSSSSSSSCCSSSSSSSSSSCCSSSSCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCCCCSSCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCC MVTHSKFPAAGMSRPLDTSLRLKTFSSKSEYQLVVNAVRKLQESGFYWSAVTGGEANLLLSAEPAGTFLIRDSSDQRHFFTLSVKTQSGTKNLRIQCEGGSFSLQSDPRSTQPVPRFDCVLKLVHHYMPPPGAPSFPSPPTEPSSEVPEQPSAQPLPGSPPRRAYYIYSGGEKIPLVLSRPLSSNVATLQHLCRKTVNGHLDSYEKVTQLPGPIREFLDQYDAPL | |||||||||||||||||||
1 | 2izvA | 0.24 | 0.14 | 4.30 | 0.83 | DEthreader | ----------------------YF-QS--ML--VPD-LLQINNNPCYWGVMDKYAAEALLEGKPEGTFLLRDSAQEDYLFSVSFRRYSRSLHARIEQWNHNFSFDA-H-D-PCVFHSPDITGLLEHYKD---P----------------------------SAC-M------FFEPLLSTPLIRTFPFSLQHIC-----------------TVI-NC-------- | |||||||||||||
2 | 2c9wA | 0.35 | 0.24 | 7.16 | 2.54 | SPARKS-K | -----------------------------QAARLAKALRELGQTGWYWGSMTVNEAKEKLKEAPEGTFLIRDSSHSDYLLTISVKTSAGPTNLRIEYQDGKFRLDSIICVKSKLKQFDSVVHLIDYYVQMCKHLY------------------------------------------LTKPLYTSAPSLQHLCRLTINKCTG-AIWGLPLPTRLKDYLEEYKFQV | |||||||||||||
3 | 2c9wA | 0.36 | 0.24 | 7.28 | 0.92 | MapAlign | -----------------------------QAARLAKALRELGQTGWYWGSMTVNEAKEKLKEAPEGTFLIRDSSHSDYLLTISVKTSAGPTNLRIEYQDGKFRLDSIICVKSKLKQFDSVVHLIDYYV------------------------------------------QMCKHLYLTKPLYTSAPSLQHLCRLTINKCTGAIWGL-PLPTRLKDYLEEYKFQV | |||||||||||||
4 | 2c9wA | 0.36 | 0.24 | 7.28 | 0.77 | CEthreader | -----------------------------QAARLAKALRELGQTGWYWGSMTVNEAKEKLKEAPEGTFLIRDSSHSDYLLTISVKTSAGPTNLRIEYQDGKFRLDSIICVKSKLKQFDSVVHLIDYYVQMCK------------------------------------------HLYLTKPLYTSAPSLQHLCRLTINKCT-GAIWGLPLPTRLKDYLEEYKFQV | |||||||||||||
5 | 2c9wA | 0.36 | 0.24 | 7.28 | 1.82 | MUSTER | -----------------------------QAARLAKALRELGQTGWYWGSMTVNEAKEKLKEAPEGTFLIRDSSHSDYLLTISVKTSAGPTNLRIEYQDGKFRLDSIICVKSKLKQFDSVVHLIDYYVQMCKH------------------------------------------LYLTKPLYTSAPSLQHLCRLTINKCT-GAIWGLPLPTRLKDYLEEYKFQV | |||||||||||||
6 | 2c9wA | 0.36 | 0.24 | 7.28 | 2.12 | HHsearch | -----------------------------QAARLAKALRELGQTGWYWGSMTVNEAKEKLKEAPEGTFLIRDSSHSDYLLTISVKTSAGPTNLRIEYQDGKFRLDSIICVKSKLKQFDSVVHLIDYYVQMCK------------------------------------------HLYLTKPLYTSAPSLQHLCRLTINKCTG-AIWGLPLPTRLKDYLEEYKFQV | |||||||||||||
7 | 2c9wA | 0.36 | 0.24 | 7.28 | 2.12 | FFAS-3D | -----------------------------QAARLAKALRELGQTGWYWGSMTVNEAKEKLKEAPEGTFLIRDSSHSDYLLTISVKTSAGPTNLRIEYQDGKFRLDSIICVKSKLKQFDSVVHLIDYYVQMCKH------------------------------------------LYLTKPLYTSAPSLQHLCRLTINKCTGAIWGLP-LPTRLKDYLEEYKFQV | |||||||||||||
8 | 2izvA | 0.22 | 0.15 | 4.64 | 0.93 | EigenThreader | --------------------NLYFP-----------DLLQINNNPCYWGVMDKYAAEALLEGKPEGTFLLRDSAQEDYLFSVSFRRYSRSLHARIEQWNHNFSFDAH---DPCVFHSPDITGLLEHYKDP-------------------------------SACM------FFEPLLSTPLIRTFPFSLQHICRTVICNCTTYDGIDALPIPSSMKLYLK--EYH | |||||||||||||
9 | 4jghA | 0.34 | 0.24 | 7.32 | 2.03 | CNFpred | -----------------------HMDPEFQAARLAKALRELGQTGWYWGSMTVNEAKEKLKEAPEGTFLIRDSSHSDYLLTISVKTSAGPTNLRIEYQDGKFRLDSIICVKSKLKQFDSVVHLIDYYVQMC----------------------------------------GTVHLYLTKPLYTSAPSLQHLCRLTINKCTG-AIWGLPLPTRLKDYLEEYKFQV | |||||||||||||
10 | 2shpA | 0.22 | 0.13 | 4.20 | 0.83 | DEthreader | ---------------------------------------K--SRRWFHPNITGVEAENLLLTGVDGSFLARPSKSNPGDLTLSVRRNGAVTHIKIQNTGDYYDLYG-------GEKFATLAELVQYYMEH--------------------------------HGQLKEK--NGDVIELKYPLNCADPTSERFHFLVRLSVRQLKQPLNTTRDPKTIQ-------- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |