Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440
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| SS Seq | CCCCCSSSSCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCSSSCCCCCSSSCCCCCSSSSCCCCCCSSSSSSSSSSSSSCCCCSSSSSSCCCCHHHHHHHHHHHHHHHHHHCHCHHCCSSSSSCCCCCCSSSSSSSCCCCCSSSSSSSSSSCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSSSCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHSSSCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCC MAGGMKVAVSPAVGPGPWGSGVGGGGTVRLLLILSGCLVYGTAETDVNVVMLQESQVCEKRASQQFCYTNVLIPKWHDIWTRIQIRVNSSRLVRVTQVENEEKLKELEQFSIWNFFSSFLKEKLNDTYVNVGLYSTKTCLKVEIIEKDTKYSVIVIRRFDPKLFLVFLLGLMLFFCGDLLSRSQIFYYSTGMTVGIVASLLIIIFILSKFMPKKSPIYVILVGGWSFSLYLIQLVFKNLQEIWRCYWQYLLSYVLTVGFMSFAVCYKYGPLENERSINLLTWTLQLMGLCFMYSGIQIPHIALAIIIIALCTKNLEHPIQWLYITCRKVCKGAEKPVPPRLLTEEEYRIQGEVETRKALEELREFCNSPDCSAWKTVSRIQSPKRFADFVEGSSHLTPNEVSVHEQEYGLGSIIAQDEIYEEASSEEEDSYSRCPAITQNNFLT |
1 | 4n6hA | 0.07 | 0.06 | 2.48 | 0.56 | CEthreader | | ------------------------------DLEDNWETLNDNLKVIEKADNAAQVKDALTKMRAAALDAQKATPPKLEDKSPDSPEMKDFRHGFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTRNAYIQKYLGSPGARSASSLALAIAITALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATSTLPFQSAKYLMETWPAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKLINICIWVLASGVGVPIMVMAVTRPRDGAVVCMLQFPSPSWYWDTVTKICVFLFAFVVPILIITVCYGLMLLRLRSVRLLSGSKEKDRSLRRITRMVLVVVGAFVVCWAPIHIVWTLVDIDRRDPLVVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLCRKPCG---------------- |
2 | 2xzlA | 0.08 | 0.06 | 2.45 | 0.83 | EigenThreader | | KNVFLLGFVSATIPPLLLRYQDAYEYQRSYGPLIKLEADYDKQLKESQ----EHISVSWSLNRHLASFTKVAIGD-------EMILWYSGMQH--------------------------------PDGYIVRLPNDTFTLELK--PSKTPPFTAEFIWKGTSYDRMQDALKKFAIDAVSHVLKTVTSATIVYHLSKIHKLKNLLKLKDEVGELSASDTKRFVKLVRKTEAEILNK----------------------------------ADEST---------QASEPECLIPIVILERKAADASLFERLISLYRMNPYLSEFPSNMFY--EGSLRTVPNSKFP-----------------------WPIRGIPRIEAMNCERIITKLFRDGVKPEQQRAYILQYMQMNGSLDKDLYIKVRANEQQAIGFLRDPRRLNVGLTRA |
3 | 5z1fA | 0.10 | 0.09 | 3.37 | 0.89 | FFAS-3D | | ILKGLEPWEGTSLTRNPFAWMLSGVDTAVHFVFLSTVLGIFACSSLLLLPTLLPLSMANITKKSSRLWAPPDGQTQKEFIDSYFREIYPETFYRSLVATENSKVNESVAKLETEQKAVLAEKQQTAAVVFFTTRVAASAAQSLHCQMVDKWTVTEAPEPRRQYFIYFFVAVTILFYMIPIARTVLESFLPQIALIVFLAMLPKLLLFLSKAEGIPSQSHAIRAASGKYFYFSVFIINLLATSLPKSATFFLTYVALKFFIGYGLKKKYLCKTEAEYATRVPGDMLILTITFCYSVIAPLILIFGITYFGL---------GWLVLRNQALKVYVPSYESYGRMWPHIHQRILAALFLFQVVMFGYLGAKTFFYTALVIPLIITSLIFGYVCRQKF----------YGGFEHTALEVACRELKQSPDLEEIFRAYIPH-------- |
4 | 3m1cA | 0.08 | 0.07 | 2.75 | 0.79 | SPARKS-K | | RHPDGRRNAPPPGPPAGTPRHPTTNLSIAHLHNASVTWLAARG------LLRTPGRYVYLSPSAST--------WPVGVWTTGGLAFGCDALVRARYGK--------------GFMGLVISRDSPPAEIIVVPADKTLARVLPGPPAGPRYRVFVLGAPNGSALDALRRVAGYPEE----STNYAQYMSRAYAEFLGE----------DPGSGTDARPSLFWRLAGLLASSGFAFVNAAHAHLSDLLGFLAHSRVLAGLAARGAAADSVFLNDPAARLRLEARLGHLVAAILERSLVAHALGYQLAFVLAYGAVAPSAARLIDALYAEFLGGRALTA-----------PMVRRALFYATAVLRAPFLAGAPSAEQRERARRGLLITTALC------TSDVAAATHADLRQKNLFWLPDHFSPCAASLRFDLAEGGFILDALAMA |
5 | 5t0oA | 0.07 | 0.04 | 1.70 | 1.00 | CNFpred | | ----------------------------------------------------------------------------------SFLRLKD--VADVEIGSQQ-----------------------YSSQGRLNG-NDAVPIMINLQSKNFPKGLTYKIPYDTTKFVIESIKEVV----------------KTFVEALILVIIVMYMFLKN-----FRATLIPMIAVPVSLLGTFAGLYSINLLTLFALILAIGIVVDDAIIVVENIDRILHE-AIQAMQEVSSPVISIVLVLCAVFV-FVGEIQRQFALTLAISVTISGFVALTLTPSLCALFLRRNEGEPFKFVKKFNDFFDWSTSVFSAGVAYILK----RTIRFV------LIFCIMLG--------AIFYLYKAVPN--SLVPEED------------------------- |
6 | 6edoA | 0.08 | 0.06 | 2.19 | 0.67 | DEthreader | | --------Q-KVPDYIAFC---LRRG--EEQEHYIITPFQEETILHAIVVFL----REAVGYAGYLAERARDQKD-----PMRLFCLVWRCLLAKEPVLL--LNSVLELSRTTAKDG-FA------FFATMNPGEPRNRFTE-----------IWVPIISIRDVLSVFIDALILLEGSPGVGKTSLITALLVRINLSQTDLMDLFGSDVPV------S-SVLEGLNACLDHRNEA-VFHP--N-------F--R---F---------------------AQ-NPQGL--PRSFINR-------------------EKDISGSPWRMRTVEDRVRCED-E-----------GGGGGGGGGGGGGGGGGGGGGGGGGGG-GG--GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---------------------- |
7 | 1v7vA | 0.06 | 0.06 | 2.62 | 1.18 | MapAlign | | VYLRDDDSGDYWSISWQPVAKSLDEAQYQIRHGLSYSKFQCDYNGIHARKTLEDAEIWDVSAFSFVEFAGTAYRPGLIEDFEGFYYLASTFDPDSYDGQ-RDRFLGLYRDEANPLAVEQGRC-------SNSAQTCNHCGSLHKQFTLFAYILGIGKHYQDVANIDAAFAAIKAHWDERVSPNQGLDTMIWTLYQAETCVYRDTAQDASVPHANPEMTRKRIVDLTCSDDHLWLIPTICKYVMETGETSFFDASVYEHMKAALDFSAEYVGQTGICKESMVSFLHFWALQEFIDLAGKDQDVNTYTEMAANVREACETHLWIRGLTKNGDKIGTAQQQEGRVHLESNTLAVLERGEQAMDAVDEHLFSPYGLHLNATPNDDIGFVTRKENGAIFSHPNPWAWVAETKLGRGDRAMKFYDALNPYNQNDIIEKRIAEPYSYVQFI |
8 | 6p25A2 | 0.09 | 0.08 | 2.98 | 0.58 | MUSTER | | KQG-IVTDPSAELASLRTMVTLKEKLLVACLAVFTAVIRLHGLAWPDSVVF-----------------------EVHFGGFASQY---IRGTYFM-----------DVHPPLAKMLYAGV--------ASLGGFQGD------FDFENIGDSFPSTTPYVLMRFFSASLGALTVILMYMTLRYSGVRMWVALMSAICFAVENSYVTISRYI----LLDAPLMFFIAAAVYSFKKYEMYPAN----SLNAYKSLLATGIALGMASSSKWVG----LFTVTWVGLLCIWRLWFMIGDLTKSSKSIFKVAFAKLAFLLGVPFALYLVFFYIHFQSLTLDGDGASFFSPEFRSTFISKFIESHKKMWHINKNVYESQPTSWPFLLRGISYWGENNRNVYLLGNAIVWWAVTAFIGIFGLIVITELFSWQLGKPILKDSKVVNFHVQVI |
9 | 1vt4I3 | 0.14 | 0.04 | 1.47 | 0.70 | HHsearch | | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EY-------ALHRSIVDH------YNI--------------PKTFD-SDDLIPYLDQYFYS--------------------HIGHHLKNIEHPER--------MTLFRMVFLD-----------------FRFLEQK-IRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLIEENLICSKYTDLLRIALMAEDEA---IFEEAHKQVQRGG |
10 | 2owoA | 0.05 | 0.05 | 2.37 | 0.54 | CEthreader | | LAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVLVSAATRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAATLHNADEIERLVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG------------KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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