Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Download alignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600 620 640 660 680 700 720 740
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCSSSSSSSCCCCCCCCCCSHHHHSSCCCCCHHHHHHHHHHHHHHHHHHHCCCCSSSSSCHHHHHHHHHHCCHHHHHHHHHHHHHCCSSSSCCCSSCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCSSSSCCCCCCCHHHHHHHHHCCCCSSSSSCCCHHHHCCCCCCCCCCSSSSCCCCCCCCCCSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCSSSSSCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCSSSSCCHHHHHHHHHHHCCCCCCSCCCCCCCCCCCCCSCCCSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCSSCCCCCCCSSSSSSCCCCSSSSSSSSSSSSSCCCCCCCCCCCCCCSSSSCCCCCCCSCCCCCSSSSSSCCSSSSSSSSSCCCSSSSSSSCCCCCSSSSSSSSCCCCCCCCCCSSSSSSSSSCCCCCCSSSSCCCCCSSSSSSSCCCCCCCCCCCCCCCCCSSCCCSSSSSSCCCCSSSSSSCCCCCCCCCCCCSSSSSSSSCCCCCCCCCCCCCCCCCCCCSSSSSSSSSSSCCCCCCCHHHHHHHHHCCCCC MGAYARASGVCARGCLDSAGPWTMSRALRPPLPPLCFFLLLLAAAGARAGGYETCPTVQPNMLNVHLLPHTHDDVGWLKTVDQYFYGIKNDIQHAGVQYILDSVISALLADPTRRFIYVEIAFFSRWWHQQTNATQEVVRDLVRQGRLEFANGGWVMNDEAATHYGAIVDQMTLGLRFLEDTFGNDGRPRVAWHIDPFGHSREQASLFAQMGFDGFFFGRLDYQDKWVRMQKLEMEQVWRASTSLKPPTADLFTGVLPNGYNPPRNLCWDVLCVDQPLVEDPRSPEYNAKELVDYFLNVATAQGRYYRTNHTVMTMGSDFQYENANMWFKNLDKLIRLVNAQQAKGSSVHVLYSTPACYLWELNKANLTWSVKHDDFFPYADGPHQFWTGYFSSRPALKRYERLSYNFLQVCNQLEALVGLAANVGPYGSGDSAPLNEAMAVLQHHDAVSGTSRQHVANDYARQLAAGQARAPQPIPRRSWSPALTIENEHIRATFDPDTGLLMEIMNMNQQLLLPVRQTFFWYNASIGDNESDQASGAYIFRPNQQKPLPVSRWAQIHLVKTPLVQEVHQNFSAWCSQVVRLYPGQRHLELEWSVGPIPVGDTWGKEVISRFDTPLETKGRFYTDSNGREILERRRDYRPTWKLNQTEPVAGNYYPVNTRIYITDGNMQLTVLTDRSQGGSSLRDGSLELMVHRRLLKDDGRGVSEPLMENGSGAWVRGRHLVLLDTAQAAAAGHRLLAEQEVLAP |
1 | 6b9oA | 0.46 | 0.41 | 11.96 | 1.33 | DEthreader | | -----------------------------------------------------TGAGTVPEQLNVHLVPHSHDDVGWLKTVDQYYVGSEN---EACVENVLDSVVMSLQRDPNRKFVFGEMAFFHRWWLEQTPETKELVRKLVKAGQLEFVNGGWCMHDEATTHYIDMIDHTTLGHRFIQEQF-N-KIPRAGWQIDPFGHSAVQGYLGAELGFDSVHFARIDYQDREKRKAEKSLEVVWRGSKT-FGSSAQIFANAFPGHYGPPNGFNFEVRNNFVPLQDDRLFDTN-VEERVQNFIDAALTQAKITRTNHIMWTMGDDFQYQYAESWFKQMDKLIHHVNKDG---R-VNALYSTPSIYTEAKNAANQTWPLKIDDYFPYADGRNAYWTGFYTSRSALKDYVRMLSGYYLATRQLGF-F------AGKKSTKYHDLADALGIAQHHDAVSGTAKQHTTNDYAKRLAIGASAEQCFRIPYVEMD-LNIGPGDLKMSFSS-G-QLKRMYNSKTGVDIPIQQNYLWYESSEGDFSDYQASGAYIFRPNGQPPPHT-S-SVTRVTRGPLVDEVHQKFNSWISQVTRLYKDKDHAEIEFTIGPIPTDDGVGKEVITRMTSTMATNKEFYTDSNGRDFLKRVRDYR-DWPLEVTQPVAGNYYPLNLGIYTKDEKSEFSVLVDRATGGASIKDGEVELMLHRRTIRDDGRGVGEPLDEQCEGLTVRGNYYLSIHKPAAGSRWRRTTGQEIYSPM |
2 | 6b9oA | 0.46 | 0.42 | 12.26 | 3.91 | SPARKS-K | | -------------------------------------------------MKYNTGAGTVPEQLNVHLVPHSHDDVGWLKTVDQYYVGSENYIQEACVENVLDSVVMSLQRDPNRKFVFGEMAFFHRWWLEQTPETKELVRKLVKAGQLEFVNGGWCMHDEATTHYIDMIDHTTLGHRFIQEQFNK--IPRAGWQIDPFGHSAVQGYLLAELGFDSVHFARIDYQDREKRKAEKSLEVVWRGSKTFG-SSAQIFANAFPGHYGPPNGFNFEVRNNFVPLQDDPRLFDTNVEERVQNFIDAALTQAKITRTNHIMWTMGDDFQYQYAESWFKQMDKLIHHVNKDGR----VNALYSTPSIYTEAKNAANQTWPLKIDDYFPYADGRNAYWTGFYTSRSALKDYVRMLSGYYLATRQLGFFA-----GKKSTKYHAFDLADALGIAQHHDAVSGTAKQHTTNDYAKRLAIGASKAVQYVEMEVPKDADNIGPGDLKMSFSS--GQLKRMYNSKTGVDIPIQQNYLWYESSEGDFSDYQASGAYIFRPNGQPPPHTSS--VTRVTRGPLVDEVHQKFNSWISQVTRLYKDKDHAEIEFTIGPIPTDDGVGKEVITRMTSTMATNKEFYTDSNGRDFLKRVRDYREDWPLEVTQPVAGNYYPLNLGIYTKDEKSEFSVLVDRATGGASIKDGEVELMLHRRTIRDDGRGVGEPLDEQCEGLTVRGNYYLSIHKPAAGSRWRRTTGQEIYSPM |
3 | 6b9oA | 0.47 | 0.42 | 12.29 | 2.39 | MapAlign | | -----------------------------------------------------TGAGTVPEQLNVHLVPHSHDDVGWLKTVDQYYVGSENYIQEACVENVLDSVVMSLQRDPNRKFVFGEMAFFHRWWLEQTPETKELVRKLVKAGQLEFVNGGWCMHDEATTHYIDMIDHTTLGHRFIQEQF--NKIPRAGWQIDPFGHSAVQGYLGAELGFDSVHFARIDYQDREKRKAEKSLEVVWRGSKTFGS-SAQIFANAFPGHYGPPNGFNFEVRNNFVPLQDDPRLFDTNVEERVQNFIDAALTQAKITRTNHIMWTMGDDFQYQYAESWFKQMDKLIHHVNKD----GRVNALYSTPSIYTEAKNAANQTWPLKIDDYFPYADGRNAYWTGFYTSRSALKDYVRMLSGYYLATRQLGFF------AGKKSTKYHAFLADALGIAQHHDAVSGTAKQHTTNDYAKRLAIGASKAPPLGWSTYFISELNIGPGDLKMSFSS--GQLKRMYNSKTGVDIPIQQNYLWYESSEGDFSDYQASGAYIFRPNGQPPPHT---SSVTRVTRPLVDEVHQKFNSWISQVTRLYKDKDHAEIEFTIGPIPTDDGVGKEVITRMTSTMATNKEFYTDSNGRDFLKRVRDYREDWPLEVTQPVAGNYYPLNLGIYTKDEKSEFSVLVDRATGGASIKDGEVELMLHRRTIRDDGRGVGEPLDETCEGLTVRGNYYLSIHKPAAGSRWRRTTGQEIYSPM |
4 | 6b9oA | 0.46 | 0.42 | 12.26 | 1.38 | CEthreader | | -------------------------------------------------MKYNTGAGTVPEQLNVHLVPHSHDDVGWLKTVDQYYVGSENYIQEACVENVLDSVVMSLQRDPNRKFVFGEMAFFHRWWLEQTPETKELVRKLVKAGQLEFVNGGWCMHDEATTHYIDMIDHTTLGHRFIQEQFNK--IPRAGWQIDPFGHSAVQGYLGAELGFDSVHFARIDYQDREKRKAEKSLEVVWRGSKTFGS-SAQIFANAFPGHYGPPNGFNFEVRNNFVPLQDDPRLFDTNVEERVQNFIDAALTQAKITRTNHIMWTMGDDFQYQYAESWFKQMDKLIHHVNKD----GRVNALYSTPSIYTEAKNAANQTWPLKIDDYFPYADGRNAYWTGFYTSRSALKDYVRMLSGYYLATRQLGFFAGKKS-----TKYHAFDLADALGIAQHHDAVSGTAKQHTTNDYAKRLAIGASKAEAVVSSTYFISELNIGPGDLKMSFSS--GQLKRMYNSKTGVDIPIQQNYLWYESSEGDFSDYQASGAYIFRPNGQPPPHTS--SVTRVTRGPLVDEVHQKFNSWISQVTRLYKDKDHAEIEFTIGPIPTDDGVGKEVITRMTSTMATNKEFYTDSNGRDFLKRVRDYREDWPLEVTQPVAGNYYPLNLGIYTKDEKSEFSVLVDRATGGASIKDGEVELMLHRRTIRDDGRGVGEPLDEQVEGLTVRGNYYLSIHKPAAGSRWRRTTGQEIYSPM |
5 | 6b9oA | 0.46 | 0.42 | 12.30 | 2.62 | MUSTER | | -------------------------------------------------MKYNTGAGTVPEQLNVHLVPHSHDDVGWLKTVDQYYVGSENYIQEACVENVLDSVVMSLQRDPNRKFVFGEMAFFHRWWLEQTPETKELVRKLVKAGQLEFVNGGWCMHDEATTHYIDMIDHTTLGHRFIQEQFNK--IPRAGWQIDPFGHSAVQGYLLAELGFDSVHFARIDYQDREKRKAEKSLEVVWRGSKTFG-SSAQIFANAFPGHYGPPNGFNFEVRNNFVPLQDDPRLFDTNVEERVQNFIDAALTQAKITRTNHIMWTMGDDFQYQYAESWFKQMDKLIHHVNKD----GRVNALYSTPSIYTEAKNAANQTWPLKIDDYFPYADGRNAYWTGFYTSRSALKDYVRMLSGYYLATRQLGFFAGKKSTKYH-----AFDLADALGIAQHHDAVSGTAKQHTTNDYAKRLAIGASKAEAVVSSEVPKDALNIGPGDLKMSFSS--GQLKRMYNSKTGVDIPIQQNYLWYESSEGDFSDYQASGAYIFRPNGQPPPHTSS--VTRVTRGPLVDEVHQKFNSWISQVTRLYKDKDHAEIEFTIGPIPTDDGVGKEVITRMTSTMATNKEFYTDSNGRDFLKRVRDYREDWPLEVTQPVAGNYYPLNLGIYTKDEKSEFSVLVDRATGGASIKDGEVELMLHRRTIRDDGRGVGEPLDEQCEGLTVRGNYYLSIHKPAAGSRWRRTTGQEIYSPM |
6 | 6b9oA | 0.46 | 0.42 | 12.33 | 5.35 | HHsearch | | -------------------------------------------------MKYNTGAGTVPEQLNVHLVPHSHDDVGWLKTVDQYYVGSENYIQEACVENVLDSVVMSLQRDPNRKFVFGEMAFFHRWWLEQTPETKELVRKLVKAGQLEFVNGGWCMHDEATTHYIDMIDHTTLGHRFIQEQFNK--IPRAGWQIDPFGHSAVQGYLLAELGFDSVHFARIDYQDREKRKAEKSLEVVWRGSKTFG-SSAQIFANAFPGHYGPPNGFNFEVRNNFVPLQDDPRLFDTNVEERVQNFIDAALTQAKITRTNHIMWTMGDDFQYQYAESWFKQMDKLIHHVNKD----GRVNALYSTPSIYTEAKNAANQTWPLKIDDYFPYADGRNAYWTGFYTSRSALKDYVRMLSGYYLATRQLGFFAGKKST-----KYHAFDLADALGIAQHHDAVSGTAKQHTTNDYAKRLAIGASKSDVYNPRNEMISELNIGPGDLKMSFSS--GQLKRMYNSKTGVDIPIQQNYLWYESSEGDFSDYQASGAYIFRPNGQPPPHTS--SVT-RVTRPLVDEVHQKFNSWISQVTRLYKDKDHAEIEFTIGPIPTDDGVGKEVITRMTSTMATNKEFYTDSNGRDFLKRVRDYREDWPLEVTQPVAGNYYPLNLGIYTKDEKSEFSVLVDRATGGASIKDGEVELMLHRRTIRDDGRGVGEPLDEQCEGLTVRGNYYLSIHKPAAGSRWRRTTGQEIYSPM |
7 | 6b9oA | 0.45 | 0.41 | 12.08 | 4.48 | FFAS-3D | | -------------------------------------------------MKYNTGAGTVPEQLNVHLVPHSHDDVGWLKTVDQYYVGSENYIQEACVENVLDSVVMSLQRDPNRKFVFGEMAFFHRWWLEQTPETKELVRKLVKAGQLEFVNGGWCMHDEATTHYIDMIDHTTLGHRFIQEQFN--KIPRAGWQIDPFGHSAVQGYLLAELGFDSVHFARIDYQDREKRKAEKSLEVVWRGS-KTFGSSAQIFANAFPGHYGPPNGFNFEVRNNFVPLQDDPRLFDTNVEERVQNFIDAALTQAKITRTNHIMWTMGDDFQYQYAESWFKQMDKLIHHVNK----DGRVNALYSTPSIYTEAKNAANQTWPLKIDDYFPYADGRNAYWTGFYTSRSALKDYVRMLSGYYLATRQLGFFA-----GKKSTKYHAFDLADALGIAQHHDAVSGTAKQHTTNDYAKRLAIGASKAEAVKDSSGNKLEVQYNIGPGDLKMSFSSGQLKRMYNSKTGVDIPIQQNYLWYESSEGDFSDYQASGAYIFRPNGQPPPHTSSVT--RVTRGPLVDEVHQKFNSWISQVTRLYKDKDHAEIEFTIGPIPTDDGVGKEVITRMTSTMATNKEFYTDSNGRDFLKRVRDYREDWPLEVTQPVAGNYYPLNLGIYTKDEKSEFSVLVDRATGGASIKDGEVELMLHRRTIRDDGRGVGEPLDEQVCMLTVRGNYYLSIHKPAAGSRWRRTTGQEIYSPM |
8 | 6b9oA | 0.36 | 0.32 | 9.41 | 2.30 | EigenThreader | | -------------------------------------------------MKYNTGAGTVPEQLNVHLVPHSHDDVGWLKTVDQYYVGSENYIQEACVENVLDSVVMSLQRDPNRKFVFGEMAFFHRWWLEQTPETKELVRKLVKAGQLEFVNGGWCMHDEATTHYIDMIDHTTLGHRFIQEQFN--KIPRAGWQIDPFGHSAVQGYLL---GAELVHFARIDYQDREKRKAEKSLEVVWRGSKTF--GSSAQIFANFPGHYGPPNGFNFEVRNNFVPLQDDPRLFDTNVEERVQNFIDAALTQAKITRTNHIMWTMGDDFQYQYAESWFKQMDKLIHHVNKDG----RVNALYSTPSIYTEAKNAANQTWLKIDDYF---------PYTGFYTSRSALKDYVRMLSGYYLATRQLGFFA---GKKSTKYHAFDLADALGIAQH-HDAVSGTAKQHTTNDYAKRLAIGASKAEAVVSSSLACLTSKQIGPGDLKMSFS--SGQLKRMYNSKTGVDIPIQQNYLWYESS------------EGDFSGAYIFRPNGQPPPHTTRVTRGPEVHQKFNS-WISQVTRLYKDKDHAEIEFTIGPIPTDDGVGKEVITRMTSTMATNKEFYTDSNGRDKRVRDYREDWPLEVTQPVAGNYYPLNL--GIYTKDEKSEFSVLV-DRATGGASIDGEVELMLHRRTIRDDGRGVGEPLDEQMTC-EGLTNYYLSIHKPAAGSRWRRTTGQEIYSPM |
9 | 6b9oA | 0.46 | 0.42 | 12.26 | 5.03 | CNFpred | | -------------------------------------------------MKYNTGAGTVPEQLNVHLVPHSHDDVGWLKTVDQYYVGSENYIQEACVENVLDSVVMSLQRDPNRKFVFGEMAFFHRWWLEQTPETKELVRKLVKAGQLEFVNGGWCMHDEATTHYIDMIDHTTLGHRFIQEQFNK--IPRAGWQIDPFGHSAVQGYLLGELGFDSVHFARIDYQDREKRKAEKSLEVVWRGSKTFGS-SAQIFANAFPGHYGPPNGFNFEVRNNFVPLQDDPRLFDTNVEERVQNFIDAALTQAKITRTNHIMWTMGDDFQYQYAESWFKQMDKLIHHVNKD----GRVNALYSTPSIYTEAKNAANQTWPLKIDDYFPYADGRNAYWTGFYTSRSALKDYVRMLSGYYLATRQLGFFAGKKS-----TKYHAFDLADALGIAQHHDAVSGTAKQHTTNDYAKRLAIGASKAVQYVEMDDVTA-LNIGPGDLKMSFSS--GQLKRMYNSKTGVDIPIQQNYLWYESSEGDFSDYQASGAYIFRPNGQPPPHT---SSVTRVTRPLVDEVHQKFNSWISQVTRLYKDKDHAEIEFTIGPIPTDDGVGKEVITRMTSTMATNKEFYTDSNGRDFLKRVRDYREDWPLEVTQPVAGNYYPLNLGIYTKDEKSEFSVLVDRATGGASIKDGEVELMLHRRTIRDDGRGVGEPLDEQVEGLTVRGNYYLSIHKPAAGSRWRRTTGQEIYSPM |
10 | 3dx4A | 0.25 | 0.22 | 6.80 | 1.33 | DEthreader | | --------------------------------------------------------YNAHHKLKVFVVPHSHNDPGWIQTFEEYYQH--------DTKHILSNALRHLHDNPEMKFIWAEISYFARFYHDLGENKKLQMKSIVKNGQLEFVTGGWVMPDEANSHWRNVLLQLTEGQTWLKQFM-N-VTPTASWAIDPFGHSPTMPYILQKSGFKNMLIQRTHYSVKKELAQQRQLEFLWRQIWD-NKGDTALFTHMMPFSYDIPPCFDFKFGLSCVPPRT---ISDQNVAARSDLLVDQWKKKAELYRTNVLLIPLGDDFRFKQNTEWDVQRVNYERLFEHINSQHFNVQAQFGTLQEYFDAVHQAEAEFPTLSGDFFTYADRSDNYWSGYYTSRPYHKRMDRVLMHYVRAAEMLSAWHS--WDGMARIEERLEQARRELSLFQHHDGITGTAKTHVVVDYEQRMQEALKCQLDDDFYSPSNLLISLRVGGPTLAFS-EQGLLKSIQLTQDSPHVPVHFKFLKYGVRS--HGDRSGAYL--FLPNGPASPVELGQPVVLVTKGKLESSVSVGLP-SVVHQTIMRG--GAPEIRNLVDIGSL-D-N-TEIVMRLETHIDSGDIFYTDLNGLQFIKRRRLDK-------LPLQ-ANYYPIPSGMFIEDANTRLTLLTGQPLGGSSLASGELEIMQDRRLASD-DERGLGQGVLD--NKPVLHIYRLVLEKVNCLTSAAHKASQSLLDPD |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
|