>O00746 (187 residues) MGGLFWRSALRGLRCGPRAPGPSLLVRHGSGGPSWTRERTLVAVKPDGVQRRLVGDVIQR FERRGFTLVGMKMLQAPESVLAEHYQDLRRKPFYPALIRYMSSGPVVAMVWEGYNVVRAS RAMIGHTDSAEAAPGTIRGDFSVHISRNVIHASDSVEGAQREIQLWFQSSELVSWADGGQ HSSIHPA |
Sequence |
20 40 60 80 100 120 140 160 180 | | | | | | | | | MGGLFWRSALRGLRCGPRAPGPSLLVRHGSGGPSWTRERTLVAVKPDGVQRRLVGDVIQRFERRGFTLVGMKMLQAPESVLAEHYQDLRRKPFYPALIRYMSSGPVVAMVWEGYNVVRASRAMIGHTDSAEAAPGTIRGDFSVHISRNVIHASDSVEGAQREIQLWFQSSELVSWADGGQHSSIHPA |
Prediction | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHSSSSSSCCHHHHCCCHHHHHHHHHHCCCSSSSSSSCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCSSSSSSCCCHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHSCCCCCCCCCCCCCC |
Confidence | 9662357664200136778887643457888886402108999883577617825999999980966777772479999999999996389841567778735982899852831799999872899977758998321223133543324799999999999980995671044334545664579 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 | | | | | | | | | MGGLFWRSALRGLRCGPRAPGPSLLVRHGSGGPSWTRERTLVAVKPDGVQRRLVGDVIQRFERRGFTLVGMKMLQAPESVLAEHYQDLRRKPFYPALIRYMSSGPVVAMVWEGYNVVRASRAMIGHTDSAEAAPGTIRGDFSVHISRNVIHASDSVEGAQREIQLWFQSSELVSWADGGQHSSIHPA |
Prediction | 6312223430441344342554533444446335233120000000201446232300420353303001222130346204510442473421441042024010000123343004302530342424504424231410221331012126337304300511057631140365465424258 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHSSSSSSCCHHHHCCCHHHHHHHHHHCCCSSSSSSSCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCSSSSSSCCCHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHSCCCCCCCCCCCCCC MGGLFWRSALRGLRCGPRAPGPSLLVRHGSGGPSWTRERTLVAVKPDGVQRRLVGDVIQRFERRGFTLVGMKMLQAPESVLAEHYQDLRRKPFYPALIRYMSSGPVVAMVWEGYNVVRASRAMIGHTDSAEAAPGTIRGDFSVHISRNVIHASDSVEGAQREIQLWFQSSELVSWADGGQHSSIHPA | |||||||||||||||||||
1 | 1s59A | 0.51 | 0.41 | 11.76 | 1.17 | DEthreader | --------------------------------SMEDVEETYIMVKPDGIQRGLVGEIISRFEKKGFKLIGLKMFQCPKELAEEHYKDLSAKSFFPNLIEYITSGPVVCMAWEGVGVVASARKLIGKTDPLQAEPGTIRGDLAVQTGRNIVHGSDSPENGKREIGLWFKEGELCKWDSALA------- | |||||||||||||
2 | 1f6tB | 0.48 | 0.39 | 11.35 | 2.51 | SPARKS-K | ---------------------------------KVNKERTFLAVKPDGVARGLVGEIIARYEKKGFVLVGLKQLVPTKDLAESHYAEHKERPFFGGLVSFITSGPVVAMVFEGKGVVASARLMIGVTNPLASAPGSIRGDFGVDVGRNIIHGSDSVESANREIALWFKPEELLTEVK-PNPNLYE-- | |||||||||||||
3 | 1b4sA | 0.49 | 0.39 | 11.19 | 1.16 | MapAlign | ----------------------------------VNKERTFLAVKPDGVARGLVGEIIARYEKKGFVLVGLKQLVPTKDLAESHYAEHKERPFFGGLVSFITSGPVVAMVFEGKGVVASARLMIGVTNPLASAPGSIRGDFGVDVGRNIIGGSDSVESANREIALWFKPEELLEVKPNPNLY----- | |||||||||||||
4 | 1b4sA | 0.48 | 0.39 | 11.20 | 0.84 | CEthreader | ----------------------------------VNKERTFLAVKPDGVARGLVGEIIARYEKKGFVLVGLKQLVPTKDLAESHYAEHKERPFFGGLVSFITSGPVVAMVFEGKGVVASARLMIGVTNPLASAPGSIRGDFGVDVGRNIIGGSDSVESANREIALWFKPEELLTEVKPNPNLYE--- | |||||||||||||
5 | 6agyA | 0.52 | 0.42 | 12.06 | 2.33 | MUSTER | -----------------------------------SNEQTFIAIKPDGVQRGLIGPIISRFENRGFKLVAMKLVSPPQSQLEQHYADLSDKPFFKGLVSYMLSGPICAMVWEGRDVVKTGRTILGATNPLASAPGTIRGDFAIDVGRNVCHGSDSVENAKKEIALWFKPEELISWKSATFD-WVY-- | |||||||||||||
6 | 4o0nA | 0.51 | 0.42 | 12.08 | 2.10 | HHsearch | ---------------------------------AKQQERTYIMVKPDGVQRGLVSEVIRRFEQRGYKLVALKMKSPDATLLEEHYADLKGKPFFPGLISYMTSGPVVCMVWEGTDVVKQGRRMLGETRPLESNPGTLRGDFCIDVGRNIVHGSDSVESANKEISLWFTPEEICEWTSAQHKWVYEQ- | |||||||||||||
7 | 5u2iA | 0.52 | 0.42 | 12.06 | 2.59 | FFAS-3D | ----------------------------------MSNERTFIALKPDAVQRGLVGTIIARFEQKGFKLVALKLITPSADLAKKHYAEHDGKPFFNGLVEFLTSGPVAAMVWEGKGVVAAARKMIGATKPLESAPGTIRGDFAIDVGRNIIHGSDAVETAQREIALWFQDSELNEWTPTQN-KWIY-- | |||||||||||||
8 | 4o0nA | 0.51 | 0.42 | 12.08 | 1.25 | EigenThreader | ---------------------------------AKQQERTYIMVKPDGVQRGLVSEVIRRFEQRGYKLVALKMKSPDATLLEEHYADLKGKPFFPGLISYMTSGPVVCMVWEGTDVVKQGRRMLGETRPLESNPGTLRGDFCIDVGRNIVHGSDSVESANKEISLWFTPEEICEWTSAQHKWVYEQ- | |||||||||||||
9 | 1ehwA | 1.00 | 0.75 | 20.96 | 1.92 | CNFpred | -----------------------------------TRERTLVAVKPDGVQRRLVGDVIQRFERRGFTLVGMKMLQAPESVLAEHYQDLRRKPFYPALIRYMSSGPVVAMVWEGYNVVRASRAMIGHTDSAEAAPGTIRGDFSVHISRNVIHASDSVEGAQREIQLWFQSSELVSW------------ | |||||||||||||
10 | 1f6tB | 0.50 | 0.39 | 11.32 | 1.17 | DEthreader | ----------------------------------VNKERTFLAVKPDGVARGLVGEIIARYEKKGFVLVGLKQLVPTKDLAESHYAEHKERPFFGGLVSFITSGPVVAMVFEGKGVVASARLMIGVTNPLASAPGSIRGDFGVDVGRNIIHGSDSVESANREIALWFKPEELLTEVKPN-------- | |||||||||||||
|
|
Top 10 structural analogs in PDB (as identified by
TM-align)
|
|
Top 5 enzyme homologs in PDB
|
Template proteins with similar binding site:
|
References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |