Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420
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| SS Seq | CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCSSSCCCCCCCCSSSSCCCCCCCCSSSSCSSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MMYSPICLTQDEFHPFIEALLPHVRAIAYTWFNLQARKRKYFKKHEKRMSKDEERAVKDELLSEKPEIKQKWASRLLAKLRKDIRQEYREDFVLTVTGKKHPCCVLSNPDQKGKIRRIDCLRQADKVWRLDLVMVILFKGIPLESTDGERLMKSPHCTNPALCVQPHHITVSVKELDLFLAYYVQEQDSGQSGSPSHNDPAKNPPGYLEDSFVKSGVFNVSELVRVSRTPITQGTGVNFPIGEIPSQPYYHDMNSGVNLQRSLSSPPSSKRPKTISIDENMEPSPTGDFYPSPSSPAAGSRTWHERDQDMSSPTTMKKPEKPLFSSASPQDSSPRLSTFPQHHHPGIPGVAHSVISTRTPPPPSPLPFPTQAILPPAPSSYFSHPTIRYPPHLNPQDTLKNYVPSYDPSSPQTSQSWYLG |
1 | 6zu9p | 0.07 | 0.06 | 2.68 | 0.49 | CEthreader | | EFNFDQYIVVNGAPVIPSAKVPVLKKALTSLFSKAGKVVNMEFPIDEATGKTKGFLFVECGSMNDAKKIIKSFHGKRLDLKHRLFLYTMKDVERYNSPSSSLKSWLMDDKV-----------------RDQFVLQDDVKTSVFWNSMFNEEDSLVESRENWST-----NYVRFSPKGTYLFSYHQQGVTAWGGPNFDRLRRFYHPDVRNSSVSPNEKYLVTFSTEPIIVEEDNEFSPFTKKNEGHQLCIWDIASGLLMATFPVIKSPYLKWPLVRWSYNDKYCARMVGDSLIVHDATKNFMPLEAKALKPSGIRDFSFAPEGVKLQPFRNGDEPSVLLAYWTPETNNSACTATIAEVPRGRVLKTVNLVQVSNVTLHWQNQAEFLCFNVERHTKSGKTQFSNLQICRLTERDIPVEKVEL |
2 | 6gmhQ | 0.03 | 0.03 | 1.82 | 0.72 | EigenThreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGVEMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSSFVLPFFGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDRAKAEAEHDEH---YYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEKQPSTQSDT |
3 | 3cnfB | 0.11 | 0.09 | 3.17 | 0.47 | FFAS-3D | | VMPDYYDVVSRFANANLQHESVLEIADIFDQADFIQTSDAVRQLRAPTLSTSQIRHAIERIADVDSTDYGKLTLRFLGTLTRSLK--------------------MQNA----QIRRIR------------------PDGTVLRQIDIEAFRWSRYFLDEL-QLRRLSVGITNPRIARRFNGVRIMYLTDDDPDPDFVPDVPEGYVAVQ---YAHRLF----------SSSLANKRNRVTYTHPPTGMAYPSPTGRPHVHMTINERAGMSKLVADNIIASVIKSNWDIEYTAEVMTPSEGYTQHVDAESIMTAPKGKLFHLQFMDGLLRPEASGEDMRLIYPLQPISVARSMRAIVNHNEVD-RPREMDTGTLSRNG--------DLLYSPVANGQ------------------------ |
4 | 4btgA | 0.13 | 0.13 | 4.37 | 1.08 | SPARKS-K | | FFQYAQAGGALSVDELVNQFTEYHQSTACIWRKLTAYINRAIKADAVKVPPT---AILEQLRTLAPSITTDFVCHVLSPLRTATYPYALVDCVRASDLRR-MLTALSSVDSKAKGALAPATTAFERSRGANAVVVLTILGRLWSPSTPKELDPSARLRNTGI-----------DQLRSNLALFIQDMVKQRGRAEVIFSDEELSSTIIPWFIEAMSEVSPFKLRPINETTSYIGQTSAIDMGQPSHVVVYEDWQFAKEITAFTPVKLANNSNQRFLDVEPGNTFAVSAFYEAVSQRGTVNSNGAEMTLGFPSDYALDRDPMVTGIVDESLEARAAVAHNPEVVVSEHQGVAAEQGLVWNVRTELRIPVGYNAIEGGSIRTPEPLEAIAYNKPIQPSEDLANIHIWPWHEASTEFAYEDAY |
5 | 3gjxA | 0.13 | 0.05 | 1.90 | 0.62 | CNFpred | | ---------------LCQNNMVILKLLSEEVFQITQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPYIFETKLISTL-----IYKFLNVPMFR--NVSLKCLTEIAFETLFTLTMMQLKQMLPLNTNIRLAYSNGK-------------EQNFIQNLSLFLCTFLKEHGQLLEKRLNLREA---------------LMEALHYMLLVS------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
6 | 6z2wE | 0.06 | 0.04 | 1.84 | 0.67 | DEthreader | | KIFVFSSDIHDVEGRNSK---------L--PSNNF-------------------------K--E---GYKIWVKRFTLDLLKTGTPLHFSLIDDGSLSNFLLPYISLDIIIKAEKGTPYADILNGIIIEFDSIFTLRMCYESIFRV--FEYCKKWATE-I--FLRTTPSLASTSFERSANLQITELSEQWAQDFNLGKSDDPKTTTRKPD--E----DREVFLKKQNLLM------GADFVPNHYILSLLARNNARLEIK----------------SLK-PKQIMCKVDYMFATTMDSSLGINNVVTLSILTKYESLKIK-------DGKLEFYMEQVDKFPPI---W--HCENILVLHSSVT-AL----------------------VALMNVIE------------------------ |
7 | 6ybt1 | 0.06 | 0.06 | 2.53 | 0.95 | MapAlign | | ------IVVDNVPQVGPDRLEKLKNVIHKIFSKFGKITNDFKGYIFLEYSPAHAVDAVKNGYKLDKQHTRYWLEEAECRDQYSVIFESGDRTSIFDPVSIEEETYVRWSPKGTYLATFHQLWGGEKFKQIQRFSHQGVQLIDFSPCERYLVTFSDDPQAIIIWDILTGHKKRGFHCESSAHWPIFKWSHDGKFFARMTLDTLSIYETPSMGLLDKKSLKISGIKDFS-WSPGGNIIAFWVPEDKDIPARVTLMQLPTRQEIRVRNLFNVVDCKLHWQKNGDYLCVKVDRVVTNFEIFRMREKQVPVDVVEMKETIIAFAWEPNGSKFAVLHGEAPRISVSFYHVKNNGKIELIKMFDKQQANTIFWSPQGQFVVLAGLRSMNGALAFVDTSDCTVMNIAEHYMASDVEWDPTGRYVVTSV |
8 | 1kqgA | 0.11 | 0.10 | 3.69 | 0.72 | MUSTER | | GYLTLPSEKQVDLQSYLEANTPKATLQVNYWSNYPKFFVSLMKSFYGDAAQKENNWGYDWLPKWDQTYD---VIKYFNMMDEKVT-------GYFCQGFNP---VASFPDKN---KVVSCLSK------LKYMVVI-FWQNPAEEANSGRWL---QWHWK--GQDAPGEARNDGEILAGIYHHLRELYQSEGGKGVEPLMKMSWNYKQPHEPQSDEV--AKENNGYALEDLYDANGVLIAKKGQLLSSFAHLRDDGTTASSCWIYTGSWTEQGNQMANRDNSDPSGLGNTLGWAWAWPLNRRVLYNRASADINGKPWDPKRMLIQWNGSKWTGNDIPDFGNAAPGTPTGPFIMQPEGRLFAINKMAEGPFPEHYEPIETPLGTNPLHPNVVSNPVVRLYEQDALRMGKKEQFPLTEHFHT |
9 | 3qsvA | 0.21 | 0.05 | 1.67 | 0.73 | HHsearch | | ------PTSNDACLSIVHSLMC-------------------HRQGG---------------------ESETFAKSLVKKLKEK--KDELDSLITAITTNGPSKCVTIQRTLDGRLHVIYA-----RLWRWDLH--------------KNELKHVKYCQYASVCVNPYHYERVVS------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
10 | 6ybt1 | 0.05 | 0.05 | 2.41 | 0.49 | CEthreader | | DLGNLRYWLEEAECRDQYSVIFESGDRTSIFWNDVKDPVSIEERARWTETYVRWSPKGTYLATFHQRGIALWGGEKFKQIQRFSHQGVQLIDFSPCERYLVTFSPLMDTQDDPQAIIIWDILTGHKKRGFHCESSAHWPIFKW-SHDGKFFARMTLDTLSIYETPSMGLLDKKSLKISGIKDFSWSPGGNIIAFWVPEDKDIPARVTLMQLPTRQEIRVRNLFNVVDCKLHWQKNGDYLCVKVDRVVTNFEIFRMREKQVPVDVVEMKETIIAFAWEPNGSKFAVLHGEAPRISVSFYHVKNNGKIELIKMFDKQQANTIFWSPQGQFVVLAGLRSMNGALAFVDTSDCTVMNIAEHYMASDVEWDPTGRYVVTSVSWWSHKVDNAYWLWTFQGRLLQKNNKDRFCQLLWRPRPPTLLSQ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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