>O00548 (180 residues) MGSRCALALAVLSALLCQVWSSGVFELKLQEFVNKKGLLGNRNCCRGGAGPPPCACRTFF RVCLKHYQASVSPEPPCTYGSAVTPVLGVDSFSLPDGGGADSAFSNPIRFPFGFTWPGTF SLIIEALHTDSPDDLATENPERLISRLATQRHLTVGEEWSQDLHSSGRTDLKYSYRFVCD |
Sequence |
20 40 60 80 100 120 140 160 180 | | | | | | | | | MGSRCALALAVLSALLCQVWSSGVFELKLQEFVNKKGLLGNRNCCRGGAGPPPCACRTFFRVCLKHYQASVSPEPPCTYGSAVTPVLGVDSFSLPDGGGADSAFSNPIRFPFGFTWPGTFSLIIEALHTDSPDDLATENPERLISRLATQRHLTVGEEWSQDLHSSGRTDLKYSYRFVCD |
Prediction | CCHHHHHHHHHHHHHHHHSCCCSSSSSSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSCCCCCCCCCCCCCCCCCSSCCCCCCCCSSCCCCCCCCCCCCCCSSSSSSCSSSSSSSSSSSSSCCCCCCCCCCCCHHHHSSSSSSCCCCCCCCCCSSSSSCCCCSSSSSSSSSSSC |
Confidence | 961599999999999862213327999999998699974899998999997577741179997536776678999987663135766886023268765567888747976412144468999999517888888888723413231112632378762453322783899999999919 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 | | | | | | | | | MGSRCALALAVLSALLCQVWSSGVFELKLQEFVNKKGLLGNRNCCRGGAGPPPCACRTFFRVCLKHYQASVSPEPPCTYGSAVTPVLGVDSFSLPDGGGADSAFSNPIRFPFGFTWPGTFSLIIEALHTDSPDDLATENPERLISRLATQRHLTVGEEWSQDLHSSGRTDLKYSYRFVCD |
Prediction | 743301021001101133042302010103304266143263510535655345403010100044364634773403214231432353404154464546524230303243524430201010124436544445434220232234441433651454426454140302020308 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
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SS Seq | CCHHHHHHHHHHHHHHHHSCCCSSSSSSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSCCCCCCCCCCCCCCCCCSSCCCCCCCCSSCCCCCCCCCCCCCCSSSSSSCSSSSSSSSSSSSSCCCCCCCCCCCCHHHHSSSSSSCCCCCCCCCCSSSSSCCCCSSSSSSSSSSSC MGSRCALALAVLSALLCQVWSSGVFELKLQEFVNKKGLLGNRNCCRGGAGPPPCACRTFFRVCLKHYQASVSPEPPCTYGSAVTPVLGVDSFSLPDGGGADSAFSNPIRFPFGFTWPGTFSLIIEALHTDSPDDLATENPERLISRLATQRHLTVGEEWSQDLHSSGRTDLKYSYRFVCD | |||||||||||||||||||
1 | 5mvxA | 0.55 | 0.43 | 12.49 | 1.17 | DEthreader | ---------------------SGVFQLQLQEFINERGVL---RPC------E-PGCRTFFRVCLKHFQAVVSP-GPCTFGTVSTPVLGTNSFAVR-----DDSGGNPLQLPFNFTWPGTFSLIIEAWHAPGDDLPELPP-DALISKIAIQGSLAVGQNWLLDEQTSTLTRLRYSYRVICC | |||||||||||||
2 | 5mw5A1 | 0.40 | 0.33 | 9.66 | 3.26 | SPARKS-K | ---------------------MGYFELQLSALRNVNGELLSGACCDGG--CGHDECDTYVRVCLKEYQAKVTPTGPCSYGHGATPVLGGNSFYLPDQD------PGLVVIPFQFAWPRSFTLIVEAWDWDNDT---TPNEELLIERVSHAGMINPEDRWKSLHFSGHVAHLELQIRVR-- | |||||||||||||
3 | 5mvxA1 | 0.50 | 0.41 | 11.92 | 0.95 | MapAlign | ---------------------SGVFQLQLQEFINER-------GVLASGRPCEPGCRTFFRVCLKHFQAVV-SPGPCTFGTVSTPVLGTNSFAVRDDS----SGGGPLQLPFNFTWPGTFSLIIEAWHAPGDDLPEALPPDALISKIAIQGSLAVGQNWLLDEQTSTLTRLRYSYRVICS | |||||||||||||
4 | 5mvxA1 | 0.53 | 0.44 | 12.68 | 0.82 | CEthreader | ---------------------SGVFQLQLQEFINERGVLASGRPC-------EPGCRTFFRVCLKHFQAVVSP-GPCTFGTVSTPVLGTNSFAVRDDSSGGGR--NPLQLPFNFTWPGTFSLIIEAWHAPGDDLRPALPPDALISKIAIQGSLAVGQNWLLDEQTSTLTRLRYSYRVICS | |||||||||||||
5 | 4xbmB1 | 0.99 | 0.81 | 22.56 | 1.76 | MUSTER | ---------------------SGVFELKLQEFVNKKGLLGNRNCCRGGAGPPPCACRTFFRVCLKHYQASVSPEPPCTYGSAVTPVLGVDSFSLPDG-------GNPIRFPFGFTWPGTFSLIIEALHTDSPD------PERLISRLATQRHLTVGEEWSQDLHSSGRTDLKYSYRFVCD | |||||||||||||
6 | 5mw5A1 | 0.40 | 0.32 | 9.51 | 4.15 | HHsearch | ---------------------MGYFELQLSALRNVNGELLSGACCDG--GCGHDECDTYVRVCLKEYQAKVTPTGPCSYGHGATPVLGGNSFYLPDQ------DPGLVVIPFQFAWPRSFTLIVEAWDWDNDTT---PNEELLIERVSHAGMINPEDRWKSLHFSGHVAHLELQIRVR-- | |||||||||||||
7 | 5mw5A1 | 0.40 | 0.33 | 9.66 | 2.02 | FFAS-3D | ---------------------MGYFELQLSALRNVNGELLSGACCDGG--CGHDECDTYVRVCLKEYQAKVTPTGPCSYGHGATPVLGGNSFYLPDQD------PGLVVIPFQFAWPRSFTLIVEAWDWDNDT---TPNEELLIERVSHAGMINPEDRWKSLHFSGHVAHLELQIRVR-- | |||||||||||||
8 | 5mw5A | 0.37 | 0.29 | 8.76 | 1.17 | EigenThreader | ---------------------MGYFELQLSALRNVNGELLSGACCDGGCGH--DECDTYVRVCLKEYQAKVTPTGPCSYGHGATPVLGGNSFLPD-------QDPGLVVIPFFAWPR--SFLIVEAWDWDNDTTPNEEL---LIERVSHAGMINPEDRWKSLHFSGHVAHLELQIRVRCD | |||||||||||||
9 | 4xl1B | 0.49 | 0.40 | 11.62 | 2.51 | CNFpred | --------------------SSSIFQLRLQEFANERGMLANGRPCEP-------GCRTFFRICLMHYQATFSE-GPCTFGNVSTPVLGTNSFVIRDKNS----GRNPLQLPLNFTWPGTFSLNIQAWHTPGDDLRPESPGNSLISQIIIQGSLAVGMNWKSDEQNNTLTRLRYSYRVVCS | |||||||||||||
10 | 5mvxA1 | 0.54 | 0.43 | 12.34 | 1.17 | DEthreader | ---------------------SGVFQLQLQEFINERGVL---RPC------E-PGCRTFFRVCLKHFQAVVS-PGPCTFGTVSTPVLGTNSFAVR-----DDSGGNPLQLPFNFTWPGTFSLIIEAWHAPGDDLPELPP-DALISKIAIQGSLAVGQNWLLDEQTSTLTRLRYSYRVICC | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |