Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Download alignment | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| SS Seq | CCHHHHCCCCCCCCCCCCCCCCCCCCCCCSSSSCHHHHHHHHHHHHCCCCCCSSSSSSSSSSCCCSSSSSSSSSCCCCCCCCCHHHCCHHHHHHHHHHHHHHCCCCCSSSSSSCCCCCCCCCCHHHHHHHHHHHHHCCCCSSSSSCCCCCCCCCSCSSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCSSSSSSSSSSCCHHHHHHHHHHHC MDRLLRLGGGMPGLGQGPPTDAPAVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQSVKGKVVIDAFRLINANMMVLGHEPRQTTSNLGHLNKPSIQALIHGLNRHYYSITINYRKNELEQKMLLNLHK |
1 | 5l4kV | 0.93 | 0.77 | 21.63 | 1.17 | DEthreader | | ---------------------APAVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGT--GVSVVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQSVKGKVVIDAFRLI-N-ANMMVLGHE--------L-K--IQALIHGLNRHYYSITINYRKNELEQKMLLNL-- |
2 | 5gjqV1 | 0.95 | 0.73 | 20.34 | 1.69 | SPARKS-K | | ---------------------------AEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQSVKGKVVIDAFRLIQALIHGLNRH--------------------------YYSITINYRKNELEQKMLLNLHK |
3 | 4d10E | 0.35 | 0.33 | 9.81 | 1.16 | MapAlign | | --------KKQQQEILAAKPWTKDHHYFKYCKISALALLKMVMHARSGGNLEVMGLMLGKVD-GETMIIMDSFALPVEGTETRVNAQAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTSAGKVNLGAFRTYPKGYK-----PPDEGPSEYQTIPLNKIEDFGVHCKQYYALEVSYFKSSLDRKLLELLW- |
4 | 4d10E | 0.34 | 0.33 | 9.85 | 0.84 | CEthreader | | IDEIYKYDKKQQQEILAAKPWTKDHHYFKYCKISALALLKMVMHARSGGNLEVMGLMLGKVD-GETMIIMDSFALPVEGTETRVNAQAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTIAGKVNLGAFRTYPKGYKPPDE-----GPSEYQTIPLNKIEDFGVHCKQYYALEVSYFKSSLDRKLLELLWN |
5 | 5l4kV | 1.00 | 0.92 | 25.86 | 1.85 | MUSTER | | -----------------PPTDAPAVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQSVKGKVVIDAFRLINANMMVLGHEPRQTTSNLGHLNKPSIQALIHGLNRHYYSITINYRKNELEQKMLLNLHK |
6 | 5l4kV | 1.00 | 0.92 | 25.86 | 3.04 | HHsearch | | -----------------PPTDAPAVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQSVKGKVVIDAFRLINANMMVLGHEPRQTTSNLGHLNKPSIQALIHGLNRHYYSITINYRKNELEQKMLLNLHK |
7 | 4b4tV1 | 0.79 | 0.64 | 18.20 | 2.46 | FFAS-3D | | --------------------DTGRDDTKETVYISSIALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVNVVDVFAMPQSGTGVSVEAVDDVFQAKMMDMLKQTGRDQMVVGWYHSHPGFGCWLSSVDVNTQKSFEQLNSRAVAVVVDPIQSVKGKVVIDAFRLIDTGALINNLEPRQT----------------------YYSLNIDYHKTAKETKMLMNLHK |
8 | 5l4kV | 0.83 | 0.75 | 21.21 | 1.30 | EigenThreader | | ----------------PPTDAPAVDTAEQVYISSLALLKMLKHGRA-GVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEAVDPVFQAKMLDMLKQ--TGRPEVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQSVKGKVVIDAFRLINANMMVLGHEPRQTTSNLGHLNKPSIQALIHGLNRHYYSITINYRKNELEQKMLL---N |
9 | 4o8xB | 0.85 | 0.63 | 17.64 | 2.08 | CNFpred | | ----------------------------ETVYISSIALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVNVVDVFAMPQSGTGVSVEAVDDVFQAKMMDMLKQTGRDQMVVGWYHSHPGFGCWLSSVDVNTQKSFEQLNSRAVAVVVDPIQSVKGKVVIDAFRLID-------------------------------LNRHYYSLNIDYHKTAKETKMLMNLHK |
10 | 4d10E | 0.38 | 0.32 | 9.35 | 1.17 | DEthreader | | ---------------LAAK-WTKDHHYFKYCKISALALLKMVMHARSGGNLEVMGLMLGKV-DGETMIIMDSFALPVEGT-ETRNAQAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISGKVNLGAFRTYPK--GYKP--PD--------Y-----EDFGVHCK-QYYALEVSYFKDRLLELLWKYNTL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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