>O00478 (144 residues) MKMASSLAFLLLNFHVSLFLVQLLTPCSAQFSVLGPSGPILAMVGEDADLPCHLFPTMSA ETMELRWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVTASD SGKYLCYFQDGDFYEKALVELKVA |
Sequence |
20 40 60 80 100 120 140 | | | | | | | MKMASSLAFLLLNFHVSLFLVQLLTPCSAQFSVLGPSGPILAMVGEDADLPCHLFPTMSAETMELRWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVTASDSGKYLCYFQDGDFYEKALVELKVA |
Prediction | CCCCCCHHHHHHHHHHHHHHHHHHHCCCCSSSSSCCCCCSSSSCCCCSSSSSSSSCCCCCCCSSSSSSSCCCCCSSSSSSCCSSSCCCCCCCCCCCSSSCCCCCCCCSSSSSSCCCCHHHCSSSSSSSSSCCCCSSSSSSSSSC |
Confidence | 998731134899999999999985224410899922982999849639998697389898814999998899953999979957145338110895372367777882899994676123679999999599732899999989 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 | | | | | | | MKMASSLAFLLLNFHVSLFLVQLLTPCSAQFSVLGPSGPILAMVGEDADLPCHLFPTMSAETMELRWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVTASDSGKYLCYFQDGDFYEKALVELKVA |
Prediction | 873433331233332232120101233344040434663030324751543240435352740403022464541011023344345544551440041345517523010304604442533033304457445413030407 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 | | | | | | | | |||||||||||||
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SS Seq | CCCCCCHHHHHHHHHHHHHHHHHHHCCCCSSSSSCCCCCSSSSCCCCSSSSSSSSCCCCCCCSSSSSSSCCCCCSSSSSSCCSSSCCCCCCCCCCCSSSCCCCCCCCSSSSSSCCCCHHHCSSSSSSSSSCCCCSSSSSSSSSC MKMASSLAFLLLNFHVSLFLVQLLTPCSAQFSVLGPSGPILAMVGEDADLPCHLFPTMSAETMELRWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVTASDSGKYLCYFQDGDFYEKALVELKVA | |||||||||||||||||||
1 | 1pkoA | 0.48 | 0.38 | 10.91 | 1.17 | DEthreader | ----------------------------GQFRVIGPGHPIRALVGDEAELPCRISPGKNATG-EVGWYRS--SRVVHLYRNGKDQDAEQAPEYRGRTELLKESIGEGKVALRIQNVRFSDEGGYTCFFRDHSYQEEAAVELKVE | |||||||||||||
2 | 6xlqA1 | 0.99 | 0.79 | 22.17 | 1.31 | SPARKS-K | -----------------------------QFSVLGPSGPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVTASDSGKYLCYFQDGDFYEKALVELKVA | |||||||||||||
3 | 4f80A1 | 0.99 | 0.79 | 22.17 | 0.50 | MapAlign | -----------------------------QFSVLGPSGPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVTASDSGKYLCYFQDGDFYEKALVELKVA | |||||||||||||
4 | 4f80A | 0.99 | 0.79 | 22.17 | 0.48 | CEthreader | -----------------------------QFSVLGPSGPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVTASDSGKYLCYFQDGDFYEKALVELKVA | |||||||||||||
5 | 4f80A1 | 0.99 | 0.79 | 22.17 | 1.31 | MUSTER | -----------------------------QFSVLGPSGPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVTASDSGKYLCYFQDGDFYEKALVELKVA | |||||||||||||
6 | 4f80A1 | 0.99 | 0.79 | 22.17 | 0.43 | HHsearch | -----------------------------QFSVLGPSGPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVTASDSGKYLCYFQDGDFYEKALVELKVA | |||||||||||||
7 | 6xlqA1 | 0.99 | 0.79 | 22.17 | 1.90 | FFAS-3D | -----------------------------QFSVLGPSGPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVTASDSGKYLCYFQDGDFYEKALVELKVA | |||||||||||||
8 | 6ffjA1 | 0.13 | 0.10 | 3.40 | 0.33 | EigenThreader | -----------------------------QVQLQQS-GAELAKPGASMKMSCRASGYS-FTSYWIHWLKRPDQGWIGYIDPATAYTESNQK-FKDKAILTA-DRSSNTAFMYLNSLTSEDSAVYYCARESPRMDYWGGTTVTVS | |||||||||||||
9 | 4f8qA | 0.98 | 0.79 | 22.18 | 1.74 | CNFpred | ----------------------------LQFSVLGPSGPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVTASDSGKYLCYFQDGDFYEKALVELKVA | |||||||||||||
10 | 5fcsH | 0.12 | 0.10 | 3.66 | 1.17 | DEthreader | -----------------GTVRITGAQDEAEVQLVQS-GAEVKKPGASVKVSCKASGYTFT-SYGISWVRQQGLEWMGWISANGNTNY-A-QKLQGRVTMTT-DTSTSTAYMELRSLRSDDTAVYYCATIDTAFDIWGGTMVTVS | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |