>O00400 (259 residues) TQGITDTYKLLFAIIKMPAVLTFCLLILTAKIGFSAADAVTGLKLVEEGVPKEHLALLAV PMVPLQIILPLIISKYTAGPQPLNTFYKAMPYRLLLGLEYALLVWWTPKVEHQGGFPIYY YIVVLLSYALHQVTVYSMYVSIMAFNAKVSDPLIGGTYMTLLNTVSNLGGNWPSTVALWL VDPLTVKECVGASNQNCRTPDAVELCKKLGGSCVTALDGYYVESIICVFIGFGWWFFLGP KFKKLQDEGSSSWKCKRNN |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | TQGITDTYKLLFAIIKMPAVLTFCLLILTAKIGFSAADAVTGLKLVEEGVPKEHLALLAVPMVPLQIILPLIISKYTAGPQPLNTFYKAMPYRLLLGLEYALLVWWTPKVEHQGGFPIYYYIVVLLSYALHQVTVYSMYVSIMAFNAKVSDPLIGGTYMTLLNTVSNLGGNWPSTVALWLVDPLTVKECVGASNQNCRTPDAVELCKKLGGSCVTALDGYYVESIICVFIGFGWWFFLGPKFKKLQDEGSSSWKCKRNN |
Prediction | CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHSSSCCCCCCCCCCCHHHHHHHHHCCCSSSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHSSSSCCC |
Confidence | 9659999999999991744999999999998603423134445899919987775656777889999999999999459993499999999999999999999974034457998226799999999999999999999999986520368653425899999999724412789999998763111203799986568678999960398499985615678999999999999999999999971992341650589 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | TQGITDTYKLLFAIIKMPAVLTFCLLILTAKIGFSAADAVTGLKLVEEGVPKEHLALLAVPMVPLQIILPLIISKYTAGPQPLNTFYKAMPYRLLLGLEYALLVWWTPKVEHQGGFPIYYYIVVLLSYALHQVTVYSMYVSIMAFNAKVSDPLIGGTYMTLLNTVSNLGGNWPSTVALWLVDPLTVKECVGASNQNCRTPDAVELCKKLGGSCVTALDGYYVESIICVFIGFGWWFFLGPKFKKLQDEGSSSWKCKRNN |
Prediction | 8640240032004104143021000110112000001212120300334053420010113323311221220011044441020003002321121132032010013135643121211231131101211231011002100202022431110000011101322331131000201230223303355644144651352056453413022101220023033213322320241043027144640415488 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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SS Seq | CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHSSSCCCCCCCCCCCHHHHHHHHHCCCSSSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHSSSSCCC TQGITDTYKLLFAIIKMPAVLTFCLLILTAKIGFSAADAVTGLKLVEEGVPKEHLALLAVPMVPLQIILPLIISKYTAGPQPLNTFYKAMPYRLLLGLEYALLVWWTPKVEHQGGFPIYYYIVVLLSYALHQVTVYSMYVSIMAFNAKVSDPLIGGTYMTLLNTVSNLGGNWPSTVALWLVDPLTVKECVGASNQNCRTPDAVELCKKLGGSCVTALDGYYVESIICVFIGFGWWFFLGPKFKKLQDEGSSSWKCKRNN | |||||||||||||||||||
1 | 6e8jA | 0.10 | 0.08 | 3.16 | 1.17 | DEthreader | ---M-----R--EFGAKPTFWSLSLGAAFVAFVGYGLISFQAPFLMRVGVSVSEAARYGAPLAAVAAFGTFLGGFLSEKTFPAIVAWLPGVGLLIAIPAYIAAFLTP------------SLTMAFWMWVIAAIAHYAYLGAQYTVSTAIVSPRSRATTVSVLLLIVSLIGNGGPMFTGMMSSAFMGIIR---NGLEEAFA-TFN-AEIGEMGLCSAAEGLRQSMVATVVFLVIAAAFYFLASRTFLKDRWS--P----- | |||||||||||||
2 | 6e8jA2 | 0.09 | 0.08 | 2.97 | 1.51 | SPARKS-K | -----------REFGAKPTFWSLSLGAAFVAFVGYGLISFQAPFLMRVHVSVSEAAIRGAPLAAVAAFGTFLGGFLSEKFTPRFPAILPG----VGLLIAIPAYIAAFLTPS--------LTMAFWMWVIAAIAHYAYLGAQYTVSTAIVSPRSRATTVSVLLLIVSLIGNGLGPMFTGMMSSAFMGGIIRKNGLEEAFATFNPGLCAGRMACSAYAEGLRQSMVATVVFLVIAAAFYFLASRTFLKDRWSPA------ | |||||||||||||
3 | 6e8jA | 0.09 | 0.08 | 3.20 | 0.68 | MapAlign | GVTVGGVMAQLFEFGAKPTFWSLSLGAAFVAFVGYGLISFQAPFLMRVHVSVSEAAIYGAPLAAVAAFGTFLGGFLSEPRFPAIVPGVGLLIAIPAYIAAFLT---------------PSLTMAFWMWVIAAIAHYAYLGAQYTVSTAIVSPRSRATTVSVLLLIVSLIGNLGPMFTGMMSSAFMIILAFATFNPGLC-AGRMAEIGEMGPALCSAYEGLRQSMVATVVFLVIAA-AFYFLASRTFLK----DRW---- | |||||||||||||
4 | 6e8jA2 | 0.09 | 0.08 | 3.07 | 0.38 | CEthreader | -----------REFGAKPTFWSLSLGAAFVAFVGYGLISFQAPFLMRVGVSVSEAAIYGAPLAAVAAFGTFLGGFLSEKFTVAWLPGVGLLIAIPAYIAAFLTPS---------------LTMAFWMWVIAAIAHYAYLGAQYTVSTAIVSPRSRATTVSVLLLIVSLIGGLGPMFTGMMSSAFMGGIIRKNGLEEAFATFNPGLCAGRMALCSAYAEGLRQSMVATVVFLVIAAAFYFLASRTFLKDRWSPA------ | |||||||||||||
5 | 6g9xA | 0.11 | 0.09 | 3.31 | 0.80 | MUSTER | AAPKVTRDWTYEEAKGDTKFWLLYLAYFCGSFAGLMVIGHLAGFGRDAGLTAMAAAGAVSSLAFSNAATRILSGWFVDKIGIRVYFAALFALQTAAMIAIFQLGGS--------------VVGLSIVAIVIGWNYGAMFTLFPATCLQFYGPTAQGSNYGLLFTACGLAGFAGPWVGGWLKDTTG------------------------------TYYLPFLCAAALCALGTAIVFMTKPPEKKHALELEVLFQ----- | |||||||||||||
6 | 1pw4A2 | 0.10 | 0.08 | 2.89 | 1.46 | HHsearch | ----TAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVGNRGATGVFFMTLVTIATI---V-Y--WMNP--AGNPTVDM----ICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVASAIVGYTVDFFGWDG------------------------------GFMVMI-GGSILAVILLIVVMIGEKRRHEQLL---QELVP- | |||||||||||||
7 | 1pw4A2 | 0.08 | 0.07 | 2.57 | 1.35 | FFAS-3D | --TAKQI--FMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNR----GATGVFFMTLVTIATIVYWMNPAGN------PTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGSVAASAIVGYTVDFFGWDG------------------------------GFMVMIGGSILAVILLIVVMIGEKRRHEQLLQE-------- | |||||||||||||
8 | 6h7dA2 | 0.07 | 0.06 | 2.40 | 1.03 | EigenThreader | --EN-----PWKNIKYRPALIFCSAIPFFQQITGNVIMFYAPVLFKTLGFGDDAALMSAVITGVVNMLSTFVSIYAVDRYGRRLLFLEGGIQMFICQLLVGSFIGARFGTSGTGTLTPATADWILAFICVYVAGFAWWGPLGWLVPSEICPLEIRPAGQAINVSVNMFFTFLIGQFFLTMLCH-----------------------------------MKFGLFYFFASMVAIMTVFIYFLLGRVWKQFWKKYIPEDAI | |||||||||||||
9 | 6exsA | 0.08 | 0.06 | 2.32 | 1.27 | CNFpred | ------------------GLGVLFFVEFWERFSYYGMRAMLIFYMYFAGIDKTTAMSIMSVYGALIYMSSIPGAWIADRTGTRGATLLGAVLIIIGHICLSLP---------------FALFGLFSSMFFIIIGSGLMKPNISNIVGRLYPENDIDAGFVIFYMSVNLGALISPIILQHFVDIRNFHGGF------------------------------LLAAIGMALGLVWYLLFNRKNLGSVGMAPTNPLSKEEKR | |||||||||||||
10 | 6e8jA2 | 0.10 | 0.08 | 3.16 | 1.17 | DEthreader | ---------R--EFGAKPTFWSLSLGAAFVAFVGYGLISFQAPFLMRVGVSVSEAARYGAPLAAVAAFGTFLGGFLSEKTFPAIVAWLPGVGLLIAIPAYIAAFLTP------------SLTMAFWMWVIAAIAHYAYLGAQYTVSTAIVSPRSRATTVSVLLLIVSLIGNGGPMFTGMMSSAFMGIIR---NGLEEAFA-TFN-AEIGEMGLCSAAEGLRQSMVATVVFLVIAAAFYFLASRTFLKDRWS--P----- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |