Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560
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| SS Seq | CCCCCCCCCSSSSSSHHHHSSSCCCSSSSSSSCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSCCCCCSSSSSSSSSCC MELPAVGEHVFAVESIEKKRIRKGRVEYLVKWRGWSPKYNTWEPEENILDPRLLIAFQNRERQEQLMGYRKRGPKPKPLVVQVPTFARRSNVLTGLQDSSTDNRAKLDLGAQGKGQGHQYELNSKKHHQYQPHSKERAGKPPPPGKSGKYYYQLNSKKHHPYQPDPKMYDLQYQGGHKEAPSPTCPDLGAKSHPPDKWAQGAGAKGYLGAVKPLAGAAGAPGKGSEKGPPNGMMPAPKEAVTGNGIGGKMKIVKNKNKNGRIVIVMSKYMENGMQAVKIKSGEVAEGEARSPSHKKRAADERHPPADRTFKKAAGAEEKKVEAPPKRREEEVSGVSDPQPQDAGSRKLSPTKEAFGEQPLQLTTKPDLLAWDPARNTHPPSHHPHPHPHHHHHHHHHHHHAVGLNLSHVRKRCLSETHGEREPCKKRLTARSISTPTCLGGSPAAERPADLPPAAALPQPEVILLDSDLDEPIDLRCVKTRSEAGEPPSSLQVKPETPASAAVAVAAAAAPTTTAEKPPAEAQDEPAESLSEFKPFFGNIIITDVTANCLTVTFKEYVTV |
1 | 6eojA | 0.06 | 0.06 | 2.69 | 1.13 | CEthreader | | IFELEEKNKRKLLKVDLPEILNEMVITSGLILKSNMCNEFLIGLSKSQEEQLLFTFVTADNQIIFFTKDHNDRIFQLNGVDQLNESLYISTYQLGDEIVPDPSIKQVMINKLGHDNKEEYLTILTFGGEIYQYRKLPQRRSRFYRNVTRNDLAITGAPDNAYAKGVSSIERIMHYFPDYNGYSVVTGSVPYILIKEDDSTPKIFKFGNIPLVSVTPWSERSVMCVDDIKNARVYTLTTDNMYYGNKLPLKQIKISNVLDDYKTLQKLVYHERAQLFLVSYCKRVPYEALGEDGEKVIGYDENVPHAEGFQSGILLINPKSWKVIDKIDFPKNSVVNEMRSSMIQINSKTKRKREYNATTEDTPPTGAFHIYDVIEVVPEPGKPDTNYKLKEIFQEEVSGTVSTVCEVSGRFMISQSQKVLVRDIQEDNSVIPVAFLDIPVFVTDSKSFGNLLIIGDAMQGFQFIGFDAEPYRMISLGRSMSKFQTMSLEFLVNGGDMYFAATDADRNVHVLKYAPDEPNSLSGQRLVHCSSFTLHSTNSCMMLLPRNEEFGSFQNVGGQV |
2 | 6f1te | 0.06 | 0.06 | 2.57 | 0.95 | EigenThreader | | HYGVKSNSLAFIKRTPVIDADKPVSSQLRVLTLSEDSDRDPASGTLERALYRIQEKRESPEVLLTLDILKHGKRFHATVSFDTDETVNDYNPLMKDFPLNDLLSATELDKIRQALVAIFTHLRKIRNTKYPIQRALRLVEAISRDLSSQLL---KVLGTRKLMHVADIVKRKREENLKMVWRINPKFRRQHEQLRAVIVRVANAIEEVNLAYENVKEVDGLDVSKEGTEAWEAAMKRYDERIDRVETRITARLRDQLGTAKNFNALFVRPHIRGAIREYQTQLIQRVKDDIESLHDKFKVQYLPPVSGSIIWAKQIDRQLTAYMKRVEDVLGKGWENHVEGQKLKQDGDSFRMKLNTQEIFDDWARKVQQRNLGVSGRIFTIESTRVRGRTGNVLKLKVNFLPEIITLSKEVRNLKWLGFRVPLAIVNKAHQANQLALIAEGIALVWESYKLDPYVQRLAET--VFNFQEKVDDLLIIEEKIDLEVRSLETCMYDHRLQAGLRAWTQVLLGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-----GGGGLEESYSAVMGI |
3 | 2kvmA | 0.69 | 0.09 | 2.49 | 0.70 | FFAS-3D | | MELSAIGEQVFAVESIRKKRVRKGKVEYLVKWKGWPPKYSTWEPEEHILDPRLVMAYEEKEERDRASGYRK--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
4 | 5jcss | 0.08 | 0.07 | 2.95 | 1.45 | SPARKS-K | | LTIPSRGEQLISTVRINEDHQDSSNKIYN----LNMIGMRIWN-VIELEEPS------EEDLTHILA---QKFPILTNLI---------PKLIDSYKNVKSIYMNTKFISLNKGAHTRVVSVRCERLDILFKNNGINKPDQLIQSSVYDSIFSFAGAIGEFKALEPIIQAIGESLDIASSRISLFLTQ---HVPTLENLDDSIKIGRAVLLKEKLNIQKKSMNSTLFAFTNHSLRQMTEPVLAKMLAKKLTVI-NVSQQ----------TETGDLLGGYKPKTVAV---PIQENFETLFNATFSLKKNEKFHKMLHRCFNKNQWKNVVKAQSILKITNTENENENAKKLNTHEKKLLLDKWADFNDSVKKFEAQSSSIENSFVFNFVEPDSRSILLSEKGDAEPIKAHPDFRIFACMNPATDVGKRDLPMGIRSRFTEIYVHSPERDITDLLSSVSDEWVNNTIVDGSNQKPRTLTRTLLYVTDIIHIYGLDQKSEAILKPVIEKFTLGRLKNVKSIMSYIITPFVEKNMMNLVRATSGKRFPVLIQGPTSSGKTSMIKY |
5 | 6eqoA | 0.05 | 0.03 | 1.30 | 0.67 | DEthreader | | AMIFEVIIPIEHGYASGVAAT---A---ITGQSYQIA-------WATEHGGMVWPLWIMGDN-PVEY-ERDTRKGAWAYTQGDLHGNVSGHRIGTIEAILDSPVGNVI------VI-GAP-H-----SQKGVT-PIAF-----------------------------PQDFI--ELSEFP-E----------------T-R-SGKYMRR-MV--AV-EGGEVLR-PESLDELARAVDGWKRRQSLSDT----------------RYRFFT---TVKNPLNERLDADNAQLFRGG-------------QPEINLRL-LPGYGGTQRLPRLLADGGGETLRALDLLGGRAIDAAALALADGSD------------------VRRDGVWEDDQH--EATKTAL-----D------------------------PGVTAIPPKQLAFGIARPRFGHERELVVNTPK-----------ALIYLLSSEVNDILTGIRDIENKIG-------------------------------------------------------------- |
6 | 6eojA | 0.07 | 0.07 | 2.93 | 1.79 | MapAlign | | LVASELYEGAKNIIDIQFLKNFTKPTIALLYQPWDLHTIVPVSNGAIIVGTNELAFLDNTGVLQSTVLLNSFADKKIINNSSLEIMFREKNTTSIWIPSSKNNDETLLLMDLKSNIYYIQMEAELLIKFDIFKLNMDLFIGFGSGNALVLRTSGNGSGSHLTVISDIYESDNNFKLGGRLRRDATTVYISMFGEEKRIIQVTTNHLYLYDTDHNDRIFQLNGVDQLNESLYISTYQLGDEIVPDPSIKQVMINKLGHDNKEEYLTILTFGGEIYQYRKLPQRRSRFYRNVTRNDLAITGAPDNAYAKGVSSIERIMHYFPDYNGYSVIFVTGSVPYILIKEDDSTPKIFKFGNIPLVSVTPWSERSVMCVDDIKNARYKTLQKLVYHERAQLFLVSYCKRVPYNVPHAEGFQSGILLINPKSWKVIDKIDFPKNSVVNEMRSSMIQINSKTKRKREYIIAGVANATTEDTPPTGAFHIQEDNSVIPVAFLDIPVFVTDSKSFGNLLIIGDAMQGFQFIGFDAEPYRMISLGRSMSKFQTMSLEFLVNGGDMYFAATDAD- |
7 | 5n8oA | 0.10 | 0.10 | 3.78 | 1.08 | MUSTER | | TQAPDVQQAVQAIAGLSERKVQFTYTDVLARTVGIL-------PPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMKQDERLSGELTGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLDGAARHNVQDSGQRTGTGSALMAMKDAGVNQGGEQRPATIISEPDRNVRYARLAGDFVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGHPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPASLPVSDSPFTALKLETPGHSVSDSATVFASVTQMAMNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKARAGETLLETAISLQKAGLHTPAQQAILPVLESKNLAFSMVDLLTE |
8 | 2kvmA | 0.69 | 0.09 | 2.49 | 1.71 | HHsearch | | MELSAIGEQVFAVESIRKKRVRKGKVEYLVKWKGWPPKYSTWEPEEHILDPRLVMAYEEKEERDRASGYRK--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
9 | 2pffB | 0.08 | 0.08 | 3.12 | 0.70 | CEthreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
10 | 7anwA | 0.06 | 0.06 | 2.58 | 0.95 | EigenThreader | | --------------GVQDALERALPELQQALSALKQAGGARAVGAGLAEVFQLVEEAWLLQGLCDAIRLDGGLQAPELETRVQAARLLEQILVAENRDRVARIGLGVILNLAKEREPVELARSVAGILEHMFKHSEETCQRLVAAGGLDAVLYWCRRTDPALLRHCALALGNCALHGGQAVQRRMVEKRAAEWLFPLAFSKEDELLRLHACLAVAVLATNKEVEREVERSGTLALVEPLVASLDPGRFA--------------------RCLVDASDTSQGRGPDDLQRLVPLLDSNRLEAQCIGAFYLCAEAAIKSLQGKTKVFSDIGAIQSLKRLVSYSTNGTKSALAKRALRLLGEEVPRPILPSVPSWKEAEVQTWLQQIGFSKYCESFREQQVDGDLLLRLTEEELQTDLGMKSGITRKRFFRELTELKTFANYSTCDRSNLADWLGSLDPRFRQYTYGLVSCGLDRSLLHRVSEQQLLEDCGIHLGVHRARILTAAREMLHSPLPCTGGKPSVEKLEAGKFEDVLSPGALDKCMVPIIDGFEWPEPQVLPEDMQ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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