>O00219 (359 residues) GQALKLPSPRRGSVALCIAAYQEDPDYLRKCLRSAQRISFPDLKVVMVVDGNRQEDAYML DIFHEVLGGTEQAGFFVWRSNFHEAGEGETEASLQEGMDRVRDVVRASTFSCIMQKWGGK REVMYTAFKALGDSVDYIQVCDSDTVLDPACTIEMLRVLEEDPQVGGVGGDVQILNKYDS WISFLSSVRYWMAFNVERACQSYFGCVQCISGPLGMYRNSLLQQFLEDWYHQKFLGSKCS FGDDRHLTNRVLSLGYRTKYTARSKCLTETPTKYLRWLNQQTRWSKSYFREWLYNSLWFH KHHLWMTYESVVTGAEMIFMSLYSLLYMSSLLPAKIFAIATINKSGWGTSGRKTIVVNF |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 | | | | | | | | | | | | | | | | | GQALKLPSPRRGSVALCIAAYQEDPDYLRKCLRSAQRISFPDLKVVMVVDGNRQEDAYMLDIFHEVLGGTEQAGFFVWRSNFHEAGEGETEASLQEGMDRVRDVVRASTFSCIMQKWGGKREVMYTAFKALGDSVDYIQVCDSDTVLDPACTIEMLRVLEEDPQVGGVGGDVQILNKYDSWISFLSSVRYWMAFNVERACQSYFGCVQCISGPLGMYRNSLLQQFLEDWYHQKFLGSKCSFGDDRHLTNRVLSLGYRTKYTARSKCLTETPTKYLRWLNQQTRWSKSYFREWLYNSLWFHKHHLWMTYESVVTGAEMIFMSLYSLLYMSSLLPAKIFAIATINKSGWGTSGRKTIVVNF |
Prediction | CCCCCCCCCCCCCSSSSSSCCCCCHHHHHHHHHHHHHCCCCCSSSSSSSCCCCCCCHHHHHHHHHHHCCCCCCCCCSSSCCSSSSCCCSSSHHHHHHHHHHHHHCCCCSSSSSSCCCCCHHHHHHHHHHHHCCCCCSSSSSCCCCCSCHHHHHHHHHHHHHCCCSSSSSSSSSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCSSSCCCCSSSSHHHHHHHHCCCCCCCCCCCCCCSHHHHHHHHHHHHHCCCSSSSSCCSSSSSSCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC |
Confidence | 99888999999819999961689889999999999984999839999967999996899999999733244578520320147712320331233334445541355305898437898599999999983677867999838986285899999999953997899962467617999989999999999999998999998198344068636550999998636741135578754126659999999970997999315299973898899999998873302899999999987513414435788999999999999999999999999989799998876789999999609 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 | | | | | | | | | | | | | | | | | GQALKLPSPRRGSVALCIAAYQEDPDYLRKCLRSAQRISFPDLKVVMVVDGNRQEDAYMLDIFHEVLGGTEQAGFFVWRSNFHEAGEGETEASLQEGMDRVRDVVRASTFSCIMQKWGGKREVMYTAFKALGDSVDYIQVCDSDTVLDPACTIEMLRVLEEDPQVGGVGGDVQILNKYDSWISFLSSVRYWMAFNVERACQSYFGCVQCISGPLGMYRNSLLQQFLEDWYHQKFLGSKCSFGDDRHLTNRVLSLGYRTKYTARSKCLTETPTKYLRWLNQQTRWSKSYFREWLYNSLWFHKHHLWMTYESVVTGAEMIFMSLYSLLYMSSLLPAKIFAIATINKSGWGTSGRKTIVVNF |
Prediction | 85536315664143020112432455141303402161604522401000124742340040034014324344322232213413422343324411420241242200110345343014002200410274110000000101003400230042026233000000202222454000000000000101100100112021100010000000220224115311343222330100110100010144513120023020202015304400320200110100000210221343200101111232331333333333332133333333333333302231202000203 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 | | | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCCCCCCCCCCCCSSSSSSCCCCCHHHHHHHHHHHHHCCCCCSSSSSSSCCCCCCCHHHHHHHHHHHCCCCCCCCCSSSCCSSSSCCCSSSHHHHHHHHHHHHHCCCCSSSSSSCCCCCHHHHHHHHHHHHCCCCCSSSSSCCCCCSCHHHHHHHHHHHHHCCCSSSSSSSSSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCSSSCCCCSSSSHHHHHHHHCCCCCCCCCCCCCCSHHHHHHHHHHHHHCCCSSSSSCCSSSSSSCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GQALKLPSPRRGSVALCIAAYQEDPDYLRKCLRSAQRISFPDLKVVMVVDGNRQEDAYMLDIFHEVLGGTEQAGFFVWRSNFHEAGEGETEASLQEGMDRVRDVVRASTFSCIMQKWGGKREVMYTAFKALGDSVDYIQVCDSDTVLDPACTIEMLRVLEEDPQVGGVGGDVQILNKYDSWISFLSSVRYWMAFNVERACQSYFGCVQCISGPLGMYRNSLLQQFLEDWYHQKFLGSKCSFGDDRHLTNRVLSLGYRTKYTARSKCLTETPTKYLRWLNQQTRWSKSYFREWLYNSLWFHKHHLWMTYESVVTGAEMIFMSLYSLLYMSSLLPAKIFAIATINKSGWGTSGRKTIVVNF | |||||||||||||||||||
1 | 6wlbA | 0.13 | 0.11 | 3.89 | 1.17 | DEthreader | IETFIELSYQLAAVDFFVSTVDEPPLITANTVLSILAVDYPKVSCYVSDDGAAMLTFESLVETAEFARKWVP---------------GNNTRDHP-GMI-QVFLGTGARLVYVSRKHHKKAGAENALVRVSATNAPYILNLDCDHYVNSKAVREAMCILMDGRDVCYVQFPQRFDGIDRSDR-YANRN-IVFFDVN-MKGLDGI-QGPMYVGTGCVFNRQALYGYTFTEWGKEIGWIYGSVTEDILSGFKMHCRGWRSIYCMPPAFKGSAPINLSDRLHQVLRWALGSVEIFFSHCPWYGYRYINTIVYPFTSLLEFWVIGLPFLKGLMGRQNTPTIV--------------------- | |||||||||||||
2 | 6yv7A | 0.16 | 0.13 | 4.18 | 1.37 | SPARKS-K | PWDVAPDPTYRPRVTVIVPTYNE-APLIEEKLDNIYEQDYPRLEVVVVDSASTDGTPSAVRRWAETHPD--------------------------------------LALTLVEETRRGKAHALNTALR--HATGEIVVITDADALWPADTLANAVKWLA-DPTVGAVSC---VKRPR-------------DFYNVLRVAESKAWATPIFHGELAAFKRELLERLG--GFPTDVG------ADDSHTATKIAMMGYRAITPPDVVCVEAVPKR--GYHAWRIRRAQHLVQHFAKAIRYLHLAWALPTAAAALAAAAAPAAALLATGAALAYRTWTTMQAYLIAAAVKNLWDKE------ | |||||||||||||
3 | 6yv7A | 0.16 | 0.13 | 4.16 | 0.92 | MapAlign | ---VAPDPTYRPRVTVIVPTYNE-APLIEEKLDNIYEQDYPKLEVVVVDSAST---DGTPSAVRRWA-----------------------------------ETHPDLALTLVEEERRGKAHALNTALRHA--TGEIVVITDADALWPRDTLANAVKWLA-DPTVGAVSCVKR-PR---------------DFYNVLRVAESKAWATPIFHGELAAFKRELLERL--GGF----PT--DVGADDSHTATKIAMMGYRAITPPDVVCVEAVPGYHAWRIRRAQHLVQHFAKAHAEAYLHLANPWALPTAAAALAAALLATGAALAPYRTWTTMQAYLIAAAVKNLWD------------- | |||||||||||||
4 | 6yv7A | 0.14 | 0.11 | 3.90 | 0.69 | CEthreader | PWDVAPDPTYRPRVTVIVPTYN-EAPLIEEKLDNIYEQDYPKLEVVVVDSASTDGTPSAVRRWAETHPDL-------------------------------------ALTLVEETERRGKAHALNTALRHAT--GEIVVITDADALWPRDTLANAVKWLA-DPTVGAVSCVKRP----------------RDFYNVLRVAESKAWATPIFHGELAAFKRELLERLGGF--------PTDVGADDSHTATKIAMMGYRAITPPDVVCVEAVPKR--GYHAWRIRRAQHLVQHFAKAIRDGKAPPPFKPILHAEAYLHLANPWALPTAAAALAAAAAAGSLPAAALLATGAALALYKPYRT | |||||||||||||
5 | 4hg6A | 0.15 | 0.13 | 4.42 | 1.01 | MUSTER | PFPRPLQPEELPTVDILVPSYNEPADMLSVTLAAAKNMIYPARTVVLCDDGG---------TDQRCMSPDPELAQKAQER-----------------RRELQQLCRELGVVYSTERNEHKAGNMSAALER--LKGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINP--DPIQRNLALENEMFYGKIHRGLDRWGGA-FFCGSAAVLRRRALDEAGG---------AGETITEDAETALEIHSRGWKSLYIDRAMIAGLQPETFASFIQQRGRWATGMMQMLLLKNPLFRRGSMSFWFFPLVRMMFLVAPLIYLFFFEEVLAYMPGYLAVSFLVQNALFARQRWPLVSE | |||||||||||||
6 | 4hg6A | 0.16 | 0.14 | 4.55 | 2.33 | HHsearch | RPFRPLQPEELPTVDILVPSYNEPADMLSVTLAAAKNMIYPLRTVVLCDDGGTDQRCRELQQLCREL--------------------------------GVVYSTRER-------NEHAKAGNMSAALER--LKGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINPDRNLALDRCPPENEMFYGKIHRGLDRWGG-AFFCGSAAVLRRRALDEAG-GFAGE-------TITEDAETALEIHSRGWKSLYIDRAMIAGLQPETFASFIQQRGRWATGMMQMLLLKNLFRRGLGIAQRLCYLNSMSFFLVAPLIYLAQAPYLARAIVTTLLRPRSARFAVTAKDETLSEN | |||||||||||||
7 | 4hg6A1 | 0.15 | 0.10 | 3.49 | 2.15 | FFAS-3D | -DPTDRPPEELPTVDILVPSYNEPADMLSVTLAAAKNMIYPARTVVLCDDGGTDQRCMSPDPELA--------------------------QKAQERRRELQQLCRELGVVYSTRERNEHAKAGNMSAALERLKGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINPDPIQRNLACPPENEMFYGKIHRGLDRWGGAF-FCGSAAVLRRRALDEAGGF--------AGETITEDAETALEIHSRGWKSLYIDRAMIAGLQAGQPIAIFGESAHWRTMREAT-------------------------------------------------------------------- | |||||||||||||
8 | 6yv7A | 0.15 | 0.11 | 3.84 | 1.22 | EigenThreader | PWDVAPDPTYRPRVTVIVPT-YNEAPLIEEKLDNIYEYPRDKLEVVVVDSASTDGTPSAVRRWAE---------------------------------------THPDLALTLVTERRGKAHALNTALRHA--TGEIVVITDADALWPRDTLANAVKWL-ADPTVGAVSCVKRPR----------------DFYNVLRVAESKAWATPIFHGELAAFKRELLERLG--------GFPTDVGADDSHTATKIAMMGYRAITPPDVVCVEAVPKRG---YHAWRIRRAQHLVQHFAKAIRDGKAPPWALPTAAAALAAAAAAYRTWTTMQAYLIAAAVKNLWDKE---------------- | |||||||||||||
9 | 6yv7A | 0.15 | 0.12 | 3.92 | 1.71 | CNFpred | PWDVAPDPTYRPRVTVIVPTYNE-APLIEEKLDNIYEQDYPKLEVVVVDSASTDGTPSAVRRWAETHP--------------------------------------DLALTLVEEERRGKAHALNTALRH--ATGEIVVITDADALWPRDTLANAVKWLA-DPTVGAVSCVKRP----------------RDFYNVLRVAESKAWATPIFHGELAAFKRELLERLG--GFPTD------VGADDSHTATKIAMMGYRAITPPDVVCVEAVPK--RGYHAWRIRRAQHLVQHFAKAIRDGAPPPFKPILHAEAYLHLANPWALPTAAAALAAAASLPAAALLA----------------- | |||||||||||||
10 | 4hg6A | 0.16 | 0.13 | 4.26 | 1.17 | DEthreader | RPFPRPLQPELPTVDILVPSYNEPADMLSVTLAAAKNMIYPRLRTVVLCDDGAQRRRELQQLCRE-L-----GV-VYS-TRER--------------------------------NEHAKAGNMSAALERL--KGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINPDPIQRNLCPPENEMFYGKIHRGL-DRW-GGAFFCGSAAVLRRRALDEAGGF----A-GE--TITEDA-ETALEIHSRGWKSLYIDRAMIAGLQPETFASFIQQRGRWATGMMQMLLLKNPLFRLIRLCYLNSMSFWFFRSEVYEVLVGFALRASLPKTARD-M------------------- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |