>O00187 (253 residues) CGLSARTTGGRIYGGQKAKPGDFPWQVLILGGTTAAGALLYDNWVLTAAHAVYEQKHDAS ALDIRMGTLKRLSPHYTQAWSEAVFIHEGYTHDAGFDNDIALIKLNNKVVINSNITPICL PRKEAESFMRTDDIGTASGWGLTQRGFLARNLMYVDIPIVDHQKCTAAYEKPPYPRGSVT ANMLCAGLESGGKDSCRGDSGGALVFLDSETERWFVGGIVSWGSMNCGEAGQYGVYTKVI NYIPWIENIISDF |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | CGLSARTTGGRIYGGQKAKPGDFPWQVLILGGTTAAGALLYDNWVLTAAHAVYEQKHDASALDIRMGTLKRLSPHYTQAWSEAVFIHEGYTHDAGFDNDIALIKLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQRGFLARNLMYVDIPIVDHQKCTAAYEKPPYPRGSVTANMLCAGLESGGKDSCRGDSGGALVFLDSETERWFVGGIVSWGSMNCGEAGQYGVYTKVINYIPWIENIISDF |
Prediction | CCCCCCCCCCCSSCCSSCCCCCCCCSSSSCCCCSSSSSSCCCCSSSSCCCCCCCCCCCCCSSSSSSCSSSCCCCCCSSSSSSSSSSCCCCCCCCCCCCSSSSSSSCCCCCCCCCSSSSSCCCCCCCCCCCCCCSSSSSCCCSCCCCCCCCSCSSSSSSSCCHHHHHHHHCCCCCCCCCCCCCSSSSCCCCCCCSCCCCCCCCCSSSSSCCCCSSSSSSSSCCCCCCCCCCCCCSSSSSHHHHHHHHHHHHHCC |
Confidence | 9688988999624986589999972899749854579982599799911205799999536999981115799982899989999697999999987616999969976478984541489987667789973899973621689999850269984421999984253366767886688846306765897285788998324541899979999998357888899998817655468789999998619 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | CGLSARTTGGRIYGGQKAKPGDFPWQVLILGGTTAAGALLYDNWVLTAAHAVYEQKHDASALDIRMGTLKRLSPHYTQAWSEAVFIHEGYTHDAGFDNDIALIKLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQRGFLARNLMYVDIPIVDHQKCTAAYEKPPYPRGSVTANMLCAGLESGGKDSCRGDSGGALVFLDSETERWFVGGIVSWGSMNCGEAGQYGVYTKVINYIPWIENIISDF |
Prediction | 8744455377150434504434101000023321100000053000000000244634143020100213245674241305401302613473424010030236340513630100000365374414742301001213167253263313050301347304531544624634025200100157343402334120100031676320100000133431303473314202014026404632675 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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SS Seq | CCCCCCCCCCCSSCCSSCCCCCCCCSSSSCCCCSSSSSSCCCCSSSSCCCCCCCCCCCCCSSSSSSCSSSCCCCCCSSSSSSSSSSCCCCCCCCCCCCSSSSSSSCCCCCCCCCSSSSSCCCCCCCCCCCCCCSSSSSCCCSCCCCCCCCSCSSSSSSSCCHHHHHHHHCCCCCCCCCCCCCSSSSCCCCCCCSCCCCCCCCCSSSSSCCCCSSSSSSSSCCCCCCCCCCCCCSSSSSHHHHHHHHHHHHHCC CGLSARTTGGRIYGGQKAKPGDFPWQVLILGGTTAAGALLYDNWVLTAAHAVYEQKHDASALDIRMGTLKRLSPHYTQAWSEAVFIHEGYTHDAGFDNDIALIKLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQRGFLARNLMYVDIPIVDHQKCTAAYEKPPYPRGSVTANMLCAGLESGGKDSCRGDSGGALVFLDSETERWFVGGIVSWGSMNCGEAGQYGVYTKVINYIPWIENIISDF | |||||||||||||||||||
1 | 1zjkA | 0.95 | 0.93 | 26.06 | 1.50 | DEthreader | GLSARTT--Q-IYGGQKAKPGDFPWQVLILGGTTAAGALLYDNWVLTAAHAVYEQKHDASALDIRMGTLKRLSPHYTQAWSEAVFIHEGYTHDAGFDNDIALIKLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQRGFLARNLMYVDIPIVDHQKCTAAYEKPPYPRGSVTANMLCAGLESGGSCRG--DSGGALVFLDSETERWFVGGIVSWGSMN-CEAGQYGVYTKVINYIPWIENIISDF | |||||||||||||
2 | 1zjkA3 | 1.00 | 0.99 | 27.78 | 2.90 | SPARKS-K | CGLSARTTGGQIYGGQKAKPGDFPWQVLILGGTTAAGALLYDNWVLTAAHAVYEQKHDASALDIRMGTLKRLSPHYTQAWSEAVFIHEGYTHDAGFDNDIALIKLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQRGFLARNLMYVDIPIVDHQKCTAAYEKPPYPRGSVTANMLCAGLESGGKDSCRGDSGGALVFLDSETERWFVGGIVSWGSMNC-EAGQYGVYTKVINYIPWIENIISDF | |||||||||||||
3 | 1z8gA2 | 0.38 | 0.36 | 10.77 | 0.66 | MapAlign | CGRR----KLPIVGGRDTSLGRWPWQVSLRYAHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGAVAQASPHGLQLGVQAVVYHGGYLNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQA--LVDGKICTVTGWGNTYYGQQAGVLQEARVPIISNDVCNDFY------GNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSRTPRWRLCGIVSWGT-GCALAQKPGVYTKVSDFREWIFQAIKTH | |||||||||||||
4 | 1z8gA2 | 0.38 | 0.37 | 10.88 | 0.36 | CEthreader | CGRRKL----PIVGGRDTSLGRWPWQVSLRYDGLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGAVAQASPHGLQLGVQAVVYHGGYLNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQ--ALVDGKICTVTGWGNTQYGQQAGVLQEARVPIISNDVCNGADFYGN----QIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSRTPRWRLCGIVSWGT-GCALAQKPGVYTKVSDFREWIFQAIKTH | |||||||||||||
5 | 1zjkA3 | 0.99 | 0.99 | 27.68 | 2.41 | MUSTER | CGLSARTTGGQIYGGQKAKPGDFPWQVLILGGTTAAGALLYDNWVLTAAHAVYEQKHDASALDIRMGTLKRLSPHYTQAWSEAVFIHEGYTHDAGFDNDIALIKLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQRGFLARNLMYVDIPIVDHQKCTAAYEKPPYPRGSVTANMLCAGLESGGKDSCRGDSGGALVFLDSETERWFVGGIVSWGSMNCE-AGQYGVYTKVINYIPWIENIISDF | |||||||||||||
6 | 6esoA | 0.35 | 0.32 | 9.69 | 1.55 | HHsearch | CFLRLSGYVCTIVGGTNSSWGEWPWQVSLQQRHLCGGSLIGHQWVLTAAHCFDGLP-LQDVWRIYSGILNLSDIDTPFSQIKEIIIHQNYKVS-EGNHDIALIKLQAPLNYTEFQKPICLPSKGDT--STIYTNCWVTGWGFSKEGEIQNILQKVNIPLVTNEECQKRYQD-----YKITQRMVCA----GGKDACKGDSGGPLVCKH--NGMWRLVGITSWGE-GCARREQPGVYTKVAEYMDWILEKTQSS | |||||||||||||
7 | 1zjkA3 | 0.98 | 0.98 | 27.36 | 3.48 | FFAS-3D | CGLSARTTGGQIYGGQKAKPGDFPWQVLILGGTTAAGALLYDNWVLTAAHAVYEQKHDASALDIRMGTLKRLSPHYTQAWSEAVFIHEGYTHDAGFDNDIALIKLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQRGFLARNLMYVDIPIVDHQKCTAAYEKPPYPRGSVTANMLCAGLESGGKDSCRGDSGGALVFLDSETERWFVGGIVSWG-SMNCEAGQYGVYTKVINYIPWIENIISDF | |||||||||||||
8 | 1jwtA | 0.36 | 0.35 | 10.36 | 0.98 | EigenThreader | CGLRPLFEKKSIVEGSDAEIGMSPWQVMLFRQELCGASLISDRWVLTAAHCLPPWDKTENDLLVRIGKHSRTRYEEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPRETAASLLQAGYKGRVTGWGNLKETGQPSVLQVVNLPIVERPVCKD------STRIRITDNMFCAGYKPDEGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGE-GCDRDGKYGFYTHVFRLKKWIQKVIDQF | |||||||||||||
9 | 1zjkA | 1.00 | 0.99 | 27.78 | 5.51 | CNFpred | CGLSARTTGGQIYGGQKAKPGDFPWQVLILGGTTAAGALLYDNWVLTAAHAVYEQKHDASALDIRMGTLKRLSPHYTQAWSEAVFIHEGYTHDAGFDNDIALIKLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQRGFLARNLMYVDIPIVDHQKCTAAYEKPPYPRGSVTANMLCAGLESGGKDSCRGDSGGALVFLDSETERWFVGGIVSWGSMNC-EAGQYGVYTKVINYIPWIENIISDF | |||||||||||||
10 | 1zjkA3 | 0.98 | 0.95 | 26.69 | 1.50 | DEthreader | CGLSART----IYGGQKAKPGDFPWQVLILGGTTAAGALLYDNWVLTAAHAVYEQKHDASALDIRMGTLKRLSPHYTQAWSEAVFIHEGYTHDAGFDNDIALIKLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQRGFLARNLMYVDIPIVDHQKCTAAYEKPPYPRGSVTANMLCAGLESGGSCRG--DSGGALVFLDSETERWFVGGIVSWGSMN-CEAGQYGVYTKVINYIPWIENIISDF | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |