Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| SS Seq | CCCCCSSSSSCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCSSSCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCSSSCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSSCCCCHHHHHHHHHHHHHCCCCSSSSSCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC IPHESQVYTLDVPDAFYYCYSPDPGNAKGKDAIMETMADQIVTVCATLDENPGVRYKSKPLDNASKLAQLVEKKLEDYYKIDEKSLIKGKTHSQLLIIDRGFDFIKDIMEDAIDNRLDSKEWPYCSQCPAVWNGSGAVSARQKPRANYLEDRKNGSKLIVFVIGGITYSEVRCAYEVSQAHKSCEVIIGSTHVLTPKKLLDDIKMLNKPKDKVSLIKDE |
1 | 4ccaA | 0.41 | 0.33 | 9.67 | 1.00 | DEthreader | | LPYEAQVFSLDAPHSTYNL-YCPFRAE-ERTRQLEVLAQQIATLCATLQEYPAIRYRKGP-EDTAQLAHAVLAKLNAFKA-DTPSLGEGKTRSQLLIMDRAADVIKDVMEDAV-EDRLDRNLWPFV-S-----DPAPT--------------RAGPRLIVYVMGGVAMSEMRAAYEVTRATEKWEVLIGSSHILTPTRF-------------------- |
2 | 3c98A2 | 0.52 | 0.44 | 12.68 | 2.19 | SPARKS-K | | LPYESQVYSLDSADSFQSFYS--PHKAQMKNPILERLAEQIATLCATLKEYPAVRYRGE-YKDNALLAQLIQDKLDAYKADDPTMGGPDKARSQLLILDRGFDPIKDIMEDTIEDKLDTKHYPYI------------------------STRRSGPRLIIFILGGVSLNEMRCAYEVTQANGKWEVLIGSTHILTPQKLLDTLKKLNKTDEEI------ |
3 | 4ccaA2 | 0.41 | 0.35 | 10.36 | 1.00 | MapAlign | | LPYEAQVFSLDAPHSTYNL--YCPFRAEERTRQLEVLAQQIATLCATLQEYPAIRYRK-GPEDTAQLAHAVLAKLNAFKADTPSLGEGPEKRSQLLIMDRAAPVIKDVMEDAVEDRLDRNLW---------------------PFVSDPAPTRAGPRLIVYVMGGVAMSEMRAAYEVTRATGKWEVLIGSSHILTPTRFLDDLKALDKKLEDI------ |
4 | 3c98A2 | 0.52 | 0.44 | 12.68 | 0.98 | CEthreader | | LPYESQVYSLDSADSFQSFYSPHK--AQMKNPILERLAEQIATLCATLKEYPAVRYRGE-YKDNALLAQLIQDKLDAYKADDPTMGGPDKARSQLLILDRGFDPIKDIMEDTIEDKLDTKHYPYISTR------------------------RSGPRLIIFILGGVSLNEMRCAYEVTQANGKWEVLIGSTHILTPQKLLDTLKKLNKTDEEI------ |
5 | 3c98A2 | 0.51 | 0.43 | 12.56 | 1.80 | MUSTER | | LPYESQVYSLDSADSFQSFYSPHKAQM--KNPILERLAEQIATLCATLKEYPAVRYRGE-YKDNALLAQLIQDKLDAYKADDPTGEGPDKARSQLLILDRGFDIIKDIMEDTIEDKLDTKHYPYI------------------------STRRSGPRLIIFILGGVSLNEMRCAYEVTQANGKWEVLIGSTHILTPQKLLDTLKKLNKTDEEI------ |
6 | 3c98A2 | 0.51 | 0.43 | 12.56 | 3.74 | HHsearch | | LPYESQVYSLDSADSFQSFYSPHKA--QMKNPILERLAEQIATLCATLKEYPAVRYRGE-YKDNALLAQLIQDKLDAYKADDPTMGGPDKARSQLLILDRGFDIIKDIMEDTIEDKLDTKHYPYISTR------------------------RSGPRLIIFILGGVSLNEMRCAYEVTQANGKWEVLIGSTHILTPQKLLDTLKKLNKTDEEI------ |
7 | 3c98A2 | 0.43 | 0.38 | 11.24 | 2.00 | FFAS-3D | | LPYESQVYSLDSADSFQSFYSPHKAQM--KNPILERLAEQIATLCATLKEYPAVRYRGE-YKDNALLAQLIQDKLDAYKADDPTGEGPDKARSQLLILDRGFDPSSPVLTPIIKDIMEDTIEDKLDT----------------KHYPYISTRRSGPRLIIFILGGVSLNEMRCAYEVTQANGKWEVLIGSTHILTPQKLLDTLKKLNKTDEEI------ |
8 | 3c98A2 | 0.49 | 0.42 | 12.07 | 0.70 | EigenThreader | | AFLESQVYSLDSADSFQSFYSPHKAQM--KNPILERLAEQIATLCATLKEYPAVRYRGEY-KDNALLAQLIQDKLDAYKADDTMGEGPDKARSQLLILDRGFDIIKDIMEDTIEDKLDTKHYPYISTRR------------------------SGPRLIIFILGGVSLNEMRCAYEVTQANGKWEVLIGSTHILTPQKLLDTLK------KLNKTDEEI |
9 | 2pjxA | 0.74 | 0.42 | 11.91 | 1.09 | CNFpred | | IPQESQVYTLDVPDAFYYCYSPDPSNASRKEVVMEAMAEQIVTVCATLDENPGVRYKSKPLDNASKLAQLVEKKLEDYYKIDEKGLIKGKTQSQLLIIDRGFDPVSTVLHE----------LTFQAMAYDLLPI------------------------------------------------------------------------------------- |
10 | 4ccaA2 | 0.40 | 0.32 | 9.42 | 1.00 | DEthreader | | LPYEAQVFSLDAPHSTYNL-YCPFRAE-ERTRQLEVLAQQIATLCATLQEYPAIRYRKGP-EDTAQLAHAVLAKLNAFKADTPS-LGEGKTRSQLLIMDRAADVIKDVMEDAV-EDRLDRNLWPFV-S-----DPAPT--------------RAGPRLIVYVMGGVAMSEMRAAYEVTRATEKWEVLIGSSHILTPTRF-------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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