Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460
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| SS Seq | CCCHHHHHHHHHCCCCCCCCCCCCCCCCHCHHHHHCCCCCCCCCSSSCCCCCCCCCCSSSSSSCCSSSSSSCCCCCCCCCCCCCCSHHHCCCCCCCCCCCCCCCCCCCCCCCSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCSSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCCCCCCCCCCSSSSCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCCCCCSSSSSSSCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCSSSSCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC MTEKFLFLYLSLLPMPLLSQAQWNENSLVSFSKIIASGNHLSNCWICHNFITRSSSYQYILVRNFSLNLTFGSGIPEGQHKSVPLQVSLANSAHQVPCLDLTPPFNQSSKTSFYFYNCSSLNQTCCPCPEGHCDRKNTSEEGFPSPTIHPMSFSPAGCHPNLTHWCPAKQMNDYRDKSPQNRCAAWEGKELITWRVLYLLPKAHTVPTWPKSTVPLGGPLSPACNQTIPAGWKSQLHKWFDSHIPRWACTPPGYVFLCGPQKNKLPFDGSPKITYSTPPVANLYTCINNIQHTGECAVGLLGPRGIGVTIYNTTQPRQKRALGLILAGMGAAIGMIAPWGGFTYHDVTLRNLSRQIDNIAKSTRDSISKLKASIDSLANVVMNNRLALDYLLAEQGGVCAVISKSCCIYVNNSGAIEEDIKKIYDEVTWLHNFGKGDSAGSIWEAVKSALPSLTWFVPLLGPAALNSLLSPLWPLSL |
1 | 1vt4I3 | 0.07 | 0.06 | 2.56 | 1.47 | MapAlign | | AIFEEAHKQVQGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-----GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--GGGGGGGGGGGG--GGGGGGGGGGG-GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG------ |
2 | 4jf3A | 0.33 | 0.06 | 1.89 | 3.19 | HHsearch | | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TQYTKLSHQLISDVQAISSTIQDLQDQVDSLAEVVLQNRRGLDLLTAEQGGICLALQEKCSFYANKSGIVRDKIKNLQDDLERRRRQLID----------------------------------------- |
3 | 6y5rA1 | 0.06 | 0.06 | 2.64 | 0.69 | CEthreader | | LQNIFGVILFLRLTWVVGTAGVLQAFAIVLICCCCTMLTAISMSAIATNGVVPAGGSYFMISRALGPEFGGAVGLCFYLGTTFAAAMYILGAIEIFLVYIVPSAAMLNNMRVSILAIYAGAIKSSFAPPHFPVCMLGNRTLSSRHIDVCSKTKEINNMTVPSKLWGFFCNSSQFFNATCDEYFVHNNVTSIQGIPGLASGIITENLWSNYLPKGEIIEKPSAKSSDVLGSLNHEYVLVDITTSFTLLVGIFSFVYLSNVVLFGACIEGVVLRDKFGDAVKGNLVVGTLSWPSPWVIVIGSFFSTCGAGLQSLTGAPRLLQAIAKDNIIPFLRVFGHSKANGEPTWALLLTAAIAELGILIASLDLVAPILSMFFLMCYLFVNLACALQTLLRTPNWRPRFRYYHWALSFMGMSICLALMFISSWYYAIVAMVIAGMIYKYIEYQGAEKEWGDGIRGLSLSAARFALLRLEEGPPHTK |
4 | 1ldjA | 0.07 | 0.06 | 2.55 | 0.67 | EigenThreader | | LDQIWDDLRAGIQQVYTRQSMAKSRYMELYTHVYNYCTSVGLEL--YKRLKEFLKNYLT---------NLLKDGEDLMDESRHWV-----RRECYEIYSLALVTWRDCLFR------PLNKKERNGETINTVELGLNEDDAFAKGPTLLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKHLEIFHTEFQNLLDADKNEDLGRMYNLVSRIQDGLGELKKLLETHIHNQGLAAIEKCGE----AALNDALVMSAFNNDAGFVAALDKACGRFINNN-----------------AVTKMAQSSSKSPELLARYCDSLLKKEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHFQMAILLQYNTDILAQVLQILLKSKLLVLPDTLIKLYNVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKHQQLLGEVLTQLSPVIKKCIDILIEKEYL |
5 | 5ha6A | 0.35 | 0.06 | 1.94 | 0.98 | FFAS-3D | | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------STQFYYKLSQELNGDMERVADSLVTLQDQLNSLAAVVLQNRRALDLLTAERGGTCLFLGEECSYYVNQSGIVTEKVKEIRDRIQRRAEE-------------------------------------------- |
6 | 4btgA | 0.08 | 0.08 | 2.94 | 0.83 | SPARKS-K | | VSSVLTILGRLWSPSTPKELDPSARALFIAYQDMVKQRGRAEVIFLSSTIPWFIEAMSEVSPF-KLRPINETSAIDHMGQPSHVVVYEDWQFAKEITAFTPVKLANNSRFLDVEPGISDRMSATLAPIGNTFAVSQRGTVNSAEMTLGFPSVVERDYALDRDPMVAIAALRTGIVDESLEARASNDLKRSMFNYYAYAVAHNPEVVVSEHQGVAAEQGSLYLVW----NVRTELRIPVGYNAIEGGSIRTPEPLEAIAYNKPIQPSEV-------LQAKVLDLAIHIWPWHYEDAYSVKRYTAEVKEFELLGLGQRRERVRILKPTVA----------HAIIQMWYSWFVEDDRTLAAARRTSRAEKLAIDGRRMQNAVTLLRKIEMIGT----------------------TGIGASAVHLAQSRIVDQMAGRGLIDDSS----DLHVGINRHRIRIWAGLAVLQMLTKVLGDSNA |
7 | 6s7pA | 0.12 | 0.04 | 1.40 | 0.69 | CNFpred | | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RLTDDISKISEGIGDKVGMFFQ-AGFIVGFIRGWKLTLVIMAISPILGLSAAVWAKILSAFSDKELAAYAKAGAVAEEALGAIRTV----IAFGGQLERYQKHLENAKEIGIKKAISANISMGIAFLLIYASYALAFWYGSTLVGNAMTVFFSILIGAFSV |
8 | 6z2wE | 0.07 | 0.04 | 1.77 | 0.67 | DEthreader | | AWTVILGRLACLESEKFSNPNRPEAAGKSEIFRILHSNFLHILILLIFSFQPPKLT-INKSF------C------NSNRYLLSRIPLNISSTTSNDV--NSVTKD--DSANMLCSLRFL--I-TNFEKDKRHGSKYK-----NWTDDQEQ-----------AFQ-KKL--------QDNILGI---------------VF-SD-IH--D-V-EGRTTYYEKLR--------------QTG-GLVEAFCWLVLNDLILIFILQWLLILILKPTTLLVLGIL-R-----------Y-----FWQAIQSLKCLPNEAKL---------L-IIIKA-KALNIIIEFISIFRVFEYCKKWATEFKQN-------------------LWYITALVNSNSSKRVLEDVRQDQLSGILEMVPNVVTLIWFLENFPDPINWF-------------------------------------------- |
9 | 5wlcLT | 0.06 | 0.05 | 2.37 | 1.32 | MapAlign | | ----VSEKETPSSIVALSAHFHYVYAAYENKVGIYKRGIEEHLLELVEHLCIFGDYLCASTDIFIYKKSDPQDKYPSEFYTKLTVVTKSNVLLFNVRTGKLVFTSNEFPDQITTAEPAPVLDIIALGTVTGEVIMFNMRKGKRIRTILSFRTDGSSHLSVGTSSGDLIFYDLDRRSRIVLKNIHRESYGGVTVKSVAMSQCGNFGFIGSSNGSITIYNMQSGILRKKYKLHKRAVTGISLDGMNRKMVSCGLDGIVKLDAPITAMVYHRSSDLFALALDDLSIVVIDAVTQRVVRQLWGHSNRITAFDFSPEGRWIVSEFLNDIDFNTYTSLEQIDKELLTLSIGPRSKMNTLLHFTKQLREGSQSYSSLLATLIAVDLEIIVWFIDALTQGLKSNKNF---------------ELYETFMSLLFKAGDVIHANNKNQDIASALQNWEDVHKKEDRLDDLVKFCMGVAAFVTT---- |
10 | 6gngA | 0.11 | 0.10 | 3.51 | 0.53 | MUSTER | | KKLTIVFVGSECTPWSKTGGL---GDVMRDLPVNLAQRGH---MSIQPRYDQYFDAWDTAVRSSIKVNGLEDVGFFHITSKGVDRIFIDHPWFLAKVWGITGNKLYGAKTGVDYPDNPMRFALMCQAALELRIPLPDPAGTVYGED-FVCNDWHSALVPI----YLKANYKTRGLYQNALLHNIIYQGRFPLEFWPALNLPEAAKKDLVFESCFAP-PPLDGISEQPIISLKPMAMMNFLQAGFIH-----ADRICTVSPQASGPRGGVELDKYIRAKGITGIMNGMDIEMWD---------ASKDKFLVTKYTASSVDEGKAANKAVLQAEMGLKVSPTTPLLDDQKADCMVEAMPYLVNTLEDMAAKFKALEKQFGMAKGVPKEEHTLMAG-CGGAVPIVSCTGCGFTFEEIPIAKGTKIIEEGCKEALAGYGSKAFAGMWKKRVLVY--EKVFYETLGI--------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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