Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420
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| SS Seq | CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCCCCCCCCCCCCCSSCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCCCC MRRVLRLLLGCFLTELCARVCRAQERAGHGQLAQLGGVLLLAGGNRSGAASGEASEGAEASDAPPTRAPTPDFCRGYFDVMGQWDPPFNCSSGDFIFCCGTCGFRFCCTFKKRRLNQSTCTNYDTPLWLNTGKPPARKDDPLHDPTKDKTNLIVYIICGVVAVMVLVGIFTKLGLEKAHRPQREHMSRALADVMRPQGHCNTDHMERDLNIVVHVQHYENMDTRTPINNLHATQMNNAVPTSPLLQQMGHPHSYPNLGQISNPYEQQPPGKELNKYASLKAVGSSDGDWAVSTLKSPKADKVNDDFYTKRRHLAELAAKGNLPLHPVRVEDEPRAFSPEHGPAKQNGQKSRTNKMPPHPLAYTSTTNFKGWDPNEQSLRRQAYSNKGKLGTAETGSSDPLGTRPQHYPPPQPYFITNSKTEVTV |
1 | 4btgA | 0.11 | 0.11 | 3.81 | 1.15 | SPARKS-K | | PVMYARLFFQYAQAELVNQFTEYHQSTNPEIWRKLTAYI-TGSSNRAIKADA-------VGKVPPTAIPSEHELFHHITVLSPLDAAYVYRVGRTAFCVRASDLRLSSVDSKMLQATFKAKGALAPALANAATTAFERSRGNFDAN-AVVSSVLTILGRLWSLRSNLALFIAYQDMVKQRGRAEELSSETTSYIGQTSAIDHMGQPSHVVVYEDWQFAKLANNSNQRFLDVEPGISDRMSATLAPIGNTFAVSANRTAVYEAVSQRGTVNSNGAEFPSVVERDYALDRALRTGIVDESLEARAFNYYAAVMHYAVAHNPEVVVS-EHQGVAAEQGLVWNVRTEL---------RIPVGYNAIEG----GSIRTPEPL-EAIAYNKPIQPSEVLQAKVLDLANHTIHIWPWHE-ASTEFAYEVTI |
2 | 1vt4I3 | 0.08 | 0.07 | 2.87 | 1.61 | MapAlign | | NDPKYERLVNAILDFLPKGGGGGGGGGGGGGGGGGGGGGGG----------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG----GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG------------------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
3 | 5m0wA | 0.34 | 0.05 | 1.41 | 4.36 | HHsearch | | --------------------------------------------------------------------QPGEYCHGWVDAQGNYHEGFQCPEQDATICCGSCALRYCCAAADARLEQGGCTNDRGE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
4 | 1vt4I3 | 0.08 | 0.08 | 3.07 | 1.00 | CEthreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--------- |
5 | 5h7cA | 0.03 | 0.03 | 1.66 | 0.72 | EigenThreader | | KFN--------KEQQNAFYEILHLPNLNEEQRNAFIQ------SLKDDPSQSANLLAEAKSLNVNQAVKQLAEKAKEATDKEEVIEIVK----------ELAELAKQS-----TDSELVNEIVKQLAEVAKEATDKELVIYIVKILAELAKQSTQLAEVAKEAELVIYIVKILAELAKQSTDSELVNEIVKQLEEVAKEATDKELVEHIEKILEELEQQSAFYEILSLPNLNFIQSLKDDPSQSANLLAEAKSLNVNQAVKQLAEKAKEATDKEEVIEIVKELAELAKQSTDSELVNEIVKQLAEVAKEATDKELVIYIVKILAELAKQSTDSELVNEIVKQLAEVAKEATDKELVIYIVKILAELAKQSTD---SELVNEIVKQLEEVAKEATDKELVEHIEKILEELKKQS----------- |
6 | 5m0wA | 0.36 | 0.05 | 1.41 | 0.54 | FFAS-3D | | ---------------------------------------------------------------------PGEYCHGWVDAQGNYHEGFQCDTQDATICCGSCALRYCCAAADARLEQGGCTNDRG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
7 | 4btgA3 | 0.12 | 0.10 | 3.41 | 1.04 | SPARKS-K | | ----------------------GFNLKVKDLNGSARGLTQAFAGELKNQLSVGALQLPLQFTRTFSASMTSELLWEVYRVGRTATYPFDANVSSVLTILGRLWS------------PSTPKELD----------PSARLRNTNGIDQLRSNLALF-----IAYQDMVKQFSELSIEAMSEPFKLRPINETTSYIGQTSAIDHMGQPSHVVVYEDWQFAKEITAFTPVKLANNSNQRFLDVSATLAPTVNSNGAEMTLGFPSVVERDYALDRDP--MVAIAALRTGIVD-----ESLEARKRSMFNYYAAVMHYAVAHNPEVVVS-EHQGVAAEQGLVWNVRTEL---------RIPVGYNAIEG----GSIRTPEPL-EAIAYNKPIQPSEVLQAKVLDLANHTIHIWP--------------- |
8 | 4i8nA | 0.11 | 0.04 | 1.36 | 0.54 | CNFpred | | -------CGHFWEMVWEQKS---------------RGVVMLNRVMEKG----------------------SLKCAQYWPQK-----EMIFEDTNLKLTLI-YYTVRQLELENL--ETREILHFHYTTWPDFGVPESPAS-ESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLMDKRKDPSSVDIKKVLLEMRKF------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
9 | 6r9tA | 0.05 | 0.03 | 1.50 | 0.67 | DEthreader | | -A-QE-PLEMDSALSVVQNLEKDL--------------RVAGGLSLAAVAALTSDP-AVQAIVLDTASDVLK--------------TQALNRCVSCL-GQR---DVDNA-----LRAVGDASKLFISSVSINLITQQAPGLALASVLAGHSVSDSIKKLITSMRDKA-PGQLECETSQMAFEPLTLAAVGAASKTLSHPQ----------------VEDLTTT-NE--SAAGVVGGVDSIELGPL-N-----------------------------------------------------------------------------------------QELGHGCAALV--AG-Q-----GAAAAIEAAAK-SIAAATSLVARMVAAATNNLCEAANAAVQGHKLSSKQVAASTAQLLVAC----- |
10 | 4maeA | 0.05 | 0.05 | 2.27 | 1.08 | MapAlign | | GGPLVVGTTMYVHSAYPNHVYALDLTQKPYAIKWQYTPVQNSQAVAVACCDVVNRGLAYANGKIF-MTTLDGQIIALDANTGKELWKMKHVVKDKVLVGVVRGRVGAYDINTGNRVWLAYSQGPDTWGWYSYDPALDLFYYGTSNPGTWNAEQRKGGDNKWSCTIFARRPDTGKARWAYQMTPWDSWDYDGVNEMILPDLTVKGKKTPCLVHQLIEAQPFVYVNWAKEISKENDRPVEIPEKRTKQGVDTKGICPNSMGGKDQQPAAFSPQTGLFYVPTNNMCMNYEGVEAYVGANVLMYSGHEGKDDYYGAFICYDALKGKRVVTAGGLAFYGTMDGWFKAVDIKTGKVLWQQKLGSGIIGNPITFLGPDKKQYVAVYSGVGGWFGIAPDDPYAGLGAVGVAYQAGLPKATTVGGELYVFALE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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