Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600 620
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| SS Seq | CCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCSSSSCCSSSSSCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCSSSSSCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCSSSSSSSSCCCCCSSSSSSCSSSCCCCSSSSCCCCCCCCSSHHHHHCCCCHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCSSSSSCCCCCCCCCCSSSCCHHHHHHHHHHHCCCHHHHHHHHHCCSSSSCCCCSSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCSSSSSSCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCSSSSSSCCSSSSSCCCHHHHCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCSSSSSCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHCCC MEDEEGPEYGKPDFVLLDQVTMEDFMRNLQLRFEKGRIYTYIGEVLVSVNPYQELPLYGPEAIARYQGRELYERPPHLYAVANAAYKAMKHRSRDTCIVISGESGAGKTEASKHIMQYIAAVTNPSQRAEVERVKDVLLKSTCVLEAFGNARTNRNHNSSRFGKYMDINFDFKGDPIGGHIHSYLLEKSRVLKQHVGERNFHAFYQLLRGSEDKQLHELHLERNPAVYNFTHQGAGLNMTVHSALDSDEQSHQAVTEAMRVIGFSPEEVESVHRILAAILHLGNIEFVETEEGGLQKEGLAVAEEALVDHVAELTATPRDLVLRSLLARTVASGGRELIEKGHTAAEASYARDACAKAVYQRLFEWVVNRINSVMEPRGRDPRRDGKDTVIGVLDIYGFEVFPVNSFEQFCINYCNEKLQQLFIQLILKQEQEEYEREGITWQSVEYFNNATIVDLVERPHRGILAVLDEACSSAGTITDRIFLQTLDMHHRHHLHYTSRQLCPTDKTMEFGRDFRIKHYAGDVTYSVEGFIDKNRDFLFQDFKRLLYNSTDPTLRAMWPDGQQDITEVTKRPLTAGTLFKNSMVALVENLASKEPFYVRCIKPNEDKVAGKLDENHCRHQVAYLGLLENVRVRRAGFA |
1 | 1g8xA | 0.36 | 0.35 | 10.29 | 1.50 | DEthreader | | VSKECPIFDGVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAFGNAKTTRNNNSSEFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLLAGATAEEKKALHLAG-PESFNYLNQ-SGCV--DIK-GVSDEDEFKITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGAG---EG--AVLKDKTALNAASTVFGVNPSVLEKALMEPRILAG-RDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCS---ERK---A-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINWTFDFGLDSQATIDLIDGRQPGILALLDEQSVFP-NATDNTLITKLHSHFSKNAKYEEPR-------F-SKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNASR-KKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFP |
2 | 4byfA1 | 0.51 | 0.48 | 13.87 | 4.95 | SPARKS-K | | ------DRVGVQDFVLLNFTSEAAFIENLRRRFRENLIYTYIGPVLVSVNPYRDLQIYSRQHMERYRGVSFYEVPPHLFAVADTVYRALRTERRDQAVMISGESGAGKTEATKRLLQFYAETCPAPERGGA--VRDRLLQSNPVLEAFGNAKTLRNDNSSRFGKYMDVQFDFKGAPVGGHILSYLLEKSRVVHQNHGERNFHIFYQLLEGGEEETLRRLGLERNPQSYLYLVKGQCAKVSSIN----DKSDWKVVRKALTVIDFTEDEVEDLLSIVASVLHLGNIHF-------AANENAQVTTENQLKYLTRLLSVEGSTLREALTHRKIEL------LSPLNLEQAAYARDALAKAVYSRTFTWLVGKINRSLASKDVESPSWRSTTVLGLLDIYGFEVFQHNSFEQFCINYCNEKLQQLFIELTLKSEQEEYEAEGIAWEPVQYFNNKIICDLVEEKFKGIISILDEECLRPGEATDLTFLEKLEDTVKHHPHFLTHKLADRKSL--GRGEFRLLHYAGEVTYSVTGFLDKNNDLLFRNLKETMCSSKNPIMSQCFDRSE-------KRPETVATQFKMSLLQLVEILQSKEPAYVRCIKPNDAKQPGRFDEVLIRHQVKYLGLLENLRVRRAG-- |
3 | 6ui4A | 0.45 | 0.42 | 12.22 | 1.47 | MapAlign | | --------IGVSDLTLLSKVSNEAINENLKKRFEGREIYTYIGHVLVSVNPFRDLGIYTDDVLQSYMGKNRLEMPPHVFAIAEASYYNMKAYSDNQCVIISGESGAGKTEAAKRIMQYIASVSGGES-GDIKQIKDMVLATNPLLESFGNAKTLRNNNSSRFGKYLQIYFNTQGEPVGADITNYLLEKSRVVGQITNERNFHIFYQFAKGASQQYRETFGVQK-PETYVYTSRSKCLDVDGI----DDLAEFEDTLNAMKVIGLSQPEQDQIFRMLSAILWIGNIQFQED-----QGGYAEVTDRSVVDFAAYLMEVTPDQLIKGITIRILTPRNGEVIESPANPAQAQATRDALAMAIYSNLFDWIVERINKSLKARQP------TTNTIGILDIYGFEIFEKNSFEQLCINYVNEKLQQIFIQLTLKAEQEEYAREQIQWTPIKYFDNKVVCDLIEQIPVGIFSAMKDATKDPAAC-DRTFMQSINGM--SHAHLTPR-----------QGNFIIKHYAGDVTYTVEGITDKNKDQLLKGLLALFQHSGNDFVHTLFPR--PVDTDNRKQPPSAGDRIRASANALVDTLMKCQPSYIRTIKPNENKSPTEYNGPNVLHQIKYLGLQENVRIRRAGFA |
4 | 5i0hA | 0.40 | 0.38 | 11.22 | 0.61 | CEthreader | | TAMHPTNEEGVDDMASLTELHGGSIMYNLFQRYKRNQIYTYIGSILASVNPYQPIGLYEPATMEQYSRRHLGELPPHIFAIANECYRCLWKRHDNQCILISGESGAGKTESTKLILKFLSVISQQSLELKTSCVERAILESSPIMEAFGNAKTVYNNNSSRFGKFVQLNICQKGNIQGGRIVDYLLEKNRVVRQNPGERNYHIFYALLAGLEHEEREEFYLST-PENYHYLNQSGCVEDKTIS----DQESFREVITAMDVMQFSKEEVREVSRLLAGILHLGNIEFITA-------GGAQVSFKTALGRSAELLGLDPTQLTDALTQRSMFLRG-EEILTPLNVQQAVDSRDSLAMALYACCFEWVIKKINSRIKGN-------EDFKSIGILDIFGFENFEVNHFEQFNINYANEKLQEYFNKHIFSLEQLEYSREGLVWEDIDWIDNGECLDLIEKK-LGLLALINEESHFPQ-ATDSTLLEKLHSQHANNHFYVKPRV--------AVNNFGVKHYAGEVQYDVRGILEKNRDTFRDDLLNLLRESRFDFIYDLFEHVSSRNNQD--RRPTVSSQFKDSLHSLMATLSSSNPFFVRCIKPNMQKMPDQFDQAVVLNQLRYSGMLETVRIRKAGYA |
5 | 4byfA1 | 0.51 | 0.48 | 13.92 | 3.75 | MUSTER | | ------DRVGVQDFVLLENFSEAAFIENLRRRFRENLIYTYIGPVLVSVNPYRDLQIYSRQHMERYRGVSFYEVPPHLFAVADTVYRALRTERRDQAVMISGESGAGKTEATKRLLQFYAETCPAPERGG--AVRDRLLQSNPVLEAFGNAKTLRNDNSSRFGKYMDVQFDFKGAPVGGHILSYLLEKSRVVHQNHGERNFHIFYQLLEGGEEETLRRLGLERNPQSYLYLVKGQCAKVSS----INDKSDWKVVRKALTVIDFTEDEVEDLLSIVASVLHLGNIHFA-------ANENAQVTTENQLKYLTRLLSVEGSTLREALTHRKIE------LLSPLNLEQAAYARDALAKAVYSRTFTWLVGKINRSLASKDVESPSWRSTTVLGLLDIYGFEVFQHNSFEQFCINYCNEKLQQLFIELTLKSEQEEYEAEGIAWEPVQYFNNKIICDLVEEKFKGIISILDEECLRPGEATDLTFLEKLEDTVKHHPHFLTHKL--ADRKSLGRGEFRLLHYAGEVTYSVTGFLDKNNDLLFRNLKETMCSSKNPIMSQCFDR-------SEKRPETVATQFKMSLLQLVEILQSKEPAYVRCIKPNDAKQPGRFDEVLIRHQVKYLGLLENLRVRRAG-- |
6 | 1g8xA | 0.36 | 0.34 | 10.21 | 2.45 | HHsearch | | NQRNPIKFDGVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAFGNAKTTRNNNSSEFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLLAGATAEEKKALHLA-GPESFNYLNQSGCVDIKG-----VSDEDFKITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGAG-----EGAVLKDKTALNAASTVFGVNPSVLEKALMEPRILAG-RDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCSE-------RKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINWTFIDFLDSQATIDLIDGRPPGILALLDEQSVFPNA-TDNTLITKLHSHFSKNAKYEEPRF--------SKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASAKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFP |
7 | 1lkxC | 0.48 | 0.45 | 13.20 | 6.59 | FFAS-3D | | ---------GVPDFVLLNQITENAFIENLTMRHKSDNIYTYIGDVVISTNPFKNLNIYKESDIKAYNGRYKYEMPPHMYALANDAYRSMRQSQENQCVIISGESGAGKTEASKKIMQFLTFVSSNQS-PNGERISKMLLDSNPLLEAFGNAKTLRNDNSSRFGKYMEMQFNAVGSPIGGKITNYLLEKSRVVGRTQGERSFHIFYQMLKGLSQSKLDELGLTPNAPAYEYLKKSGC----FDVSTIDDSGEFKIIVKAMETLGLKESDQNSIWRILAAILHIGNITFAEAAEQRTGTTTVKVSDTKSLAAAASCLKTDQQSLSIALCYRSVISV-------PMDCNQAAYSRDALAKALYERLFNWLVSKINTIINCT------TEKGPVIGILDIYGFEVFQNNSFEQLNINFCNEKLQQLFIELTLKSEQEEYVREGIEWKNIEYFNNKPICELIEKKPIGLISLLDEACLIAKST-DQTFLDSICKQFEKNPHLQSYVVSK--DRSIGDTCFRLKHYAGDVTYDVRGFLDKNKDTLFGDLISSMQSSSDPLVQGLFPPTRPE--DSKKRPETAGSQFRNAMNALITTLLACSPHYVRCIKSNDNKQAGVIDEDRVRHQVRYLGLLENVRVRRAGFA |
8 | 4l79A | 0.49 | 0.47 | 13.60 | 1.60 | EigenThreader | | KSSLLDNMIGVGDTVLLEPLNEETFIDNLKKRFDHNEIYTYIGSVVISVNPYRSLPIYSPEKVEDYRNRNFYELSPHIFALSDEAYRSLRDQDKDQCILITGESGAGKTEASKLVMSYVAAVC--GKGAEVNQVKEQLLQSTPVLEAFGNAKTVRNDNSSRFGKYMDIEFDFKGDPLGGVISNYLLEKSRVVKQPRGERNFHVFYQLLSGASEELLHKLKLERDF-----SRYNYLSLDSAKVNGVDDAANFRTVRNAMQIVGFSDPEAESVLEVVAAVLKLGNI-EFKPESDE-----SKIKDKNELKEICELTSIDQVVLERAFSF---RTVEAKQSTTLN-VAQAYYARDALAKNLYSRLFSWLVNRINESIKAQT-----KVRKKVMGVLDIYGFEIFEDNSFEQFIINYCNEKLQQIFIELTLKEEQEEYIREDIEWTHIDYFNNAIICDLIENNTNGILAMLDEECLRPGTVTDETFLEKLNQVCATHQHSRMSKCRFLNDTTLPHSCFRIQHYAGKVLYQVEGFVDKNNDLLYRDLSQAMWKAGHALIKSLFPEGN-PAKVNLKRPPTAGSQFKASVATLMKNLQTKNPNYIRCIKPNDKKAAHIFSESLVCHQIRYLGLLENVRVRRAGYA |
9 | 4l79A | 0.50 | 0.48 | 13.98 | 4.76 | CNFpred | | KSSLLDNMIGVGDTVLLEPLNEETFIDNLKKRFDHNEIYTYIGSVVISVNPYRSLPIYSPEKVEDYRNRNFYELSPHIFALSDEAYRSLRDQDKDQCILITGESGAGKTEASKLVMSYVAAVCGK--GAEVNQVKEQLLQSTPVLEAFGNAKTVRNDNSSRFGKYMDIEFDFKGDPLGGVISNYLLEKSRVVKQPRGERNFHVFYQLLSGASEELLHKLKLERDFSRYNYLSLD-SAKVNGV----DDAANFRTVRNAMQIVGFSDPEAESVLEVVAAVLKLGNIEFKPES------DESKIKDKNELKEICELTSIDQVVLERAFSFRTVEA-KQEKVSTTLNVAQAYYARDALAKNLYSRLFSWLVNRINESIKAQTKV-----RKKVMGVLDIYGFEIFEDNSFEQFIINYCNEKLQQIFIELTLKEEQEEYIREDIEWTHIDYFNNAIICDLIENNTNGILAMLDEECLRPGTVTDETFLEKLNQVCATHQHFESRMSKC-NDTTLPHSCFRIQHYAGKVLYQVEGFVDKNNDLLYRDLSQAMWKAGHALIKSLFPEGNPAKVN-LKRPPTAGSQFKASVATLMKNLQTKNPNYIRCIKPNDKKAAHIFSESLVCHQIRYLGLLENVRVRRAGYA |
10 | 6i7dA | 0.30 | 0.29 | 8.77 | 1.50 | DEthreader | | KCIDPSVDPMFGDIGLLNHTNIPCVLDFLKHRYLKNQIYTTAVPLIVAINPYKDLGNTTNEWIRRYRTADHTKLPPHVFTCAREALSNLHGVNKSQTIIVSGESGAGKTEATKQIMRYFAS-SKSGNM-D-LRIQTAIMAANPVLEAFGNAKTIRNNNSSRFGRFMQLVISHEGGIRYGSVVAFLLEKSRIITQDDNERSYHIFYQFLKGANSTMKSKFGLKG-VTEYKLLNP-NSTEV--SG--VDDVKDFEEVIESLKNMELSESDIEVIFSIVAGILTLGNVRLIEKQE--LSDAAAIMDDMGVFNKACELMYLDPELIKREILIKVTVAG-GTKIEGRWNKNDAEVLKSSLCKAMYEKLFLWIIRHLNSRIEPE--GGF----KTFMGMLDIFGFEVFKNNSLEQLFINITNEMLQKNFVDIVFERESKLYKDEGISTAELKYTSNKEVINVLCEKGKSVLSYLEDQCLAP-GGTDEKFVSSCATNLKENNKFTPA-KV-----A-SNKNFIIQHTIGPIQYCAESFLLKNKDVLRGDLVEVIKDSPNPIVQQLFE-GQVIEKGKIAKGSLIGSQFLNQLTSLMNLINSTEPHFIRCIKPNENKKPLEWCEPKILIQLHALSILEALVLRQLGYS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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